RNA–Protein interactions for RNA: ENST00000543854.5

SPPL3-208, Transcript of signal peptide peptidase like 3, humanhuman

TSL 5

Gene SPPL3, Length 508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-208ENST00000543854 AP5S1Q9NUS5 200 aa12.38□□□□□ -0.43
SPPL3-208ENST00000543854 INAFM2P0DMQ5 153 aa12.37□□□□□ -0.43
SPPL3-208ENST00000543854 MRPL52Q86TS9 123 aaKnown RBP12.37□□□□□ -0.43
SPPL3-208ENST00000543854 C9orf163Q8N9P6 203 aa12.37□□□□□ -0.43
SPPL3-208ENST00000543854 C20orf78Q9BR46 151 aa12.37□□□□□ -0.43
SPPL3-208ENST00000543854 CNBPP62633 177 aaKnown RBP12.36□□□□□ -0.43
SPPL3-208ENST00000543854 SMAGPQ0VAQ4 97 aa12.36□□□□□ -0.43
SPPL3-208ENST00000543854 CFAP161Q6P656 301 aa12.36□□□□□ -0.43
SPPL3-208ENST00000543854 LINC00528Q8N1L1 170 aa12.36□□□□□ -0.43
SPPL3-208ENST00000543854 TRBV24-1A0A075B6N3 115 aa12.35□□□□□ -0.43
SPPL3-208ENST00000543854 D6R8Y8 96 aa12.35□□□□□ -0.43
SPPL3-208ENST00000543854 MT-ND4LP03901 98 aa12.35□□□□□ -0.43
SPPL3-208ENST00000543854 C15orf56Q8N910 161 aa12.35□□□□□ -0.43
SPPL3-208ENST00000543854 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.34□□□□□ -0.43
SPPL3-208ENST00000543854 TNFRSF6BO95407 300 aa12.34□□□□□ -0.43
SPPL3-208ENST00000543854 CIRBP-AS1Q8TBR5 109 aa12.34□□□□□ -0.43
SPPL3-208ENST00000543854 ANAPC16Q96DE5 110 aa12.34□□□□□ -0.43
SPPL3-208ENST00000543854 CDC42SE2Q9NRR3 84 aa12.34□□□□□ -0.43
SPPL3-208ENST00000543854 LINC00959A0A1B0GUT2 108 aa12.33□□□□□ -0.44
SPPL3-208ENST00000543854 TCAPO15273 167 aa12.33□□□□□ -0.44
SPPL3-208ENST00000543854 PPBPP02775 128 aa12.33□□□□□ -0.44
SPPL3-208ENST00000543854 PLA2G1BP04054 148 aaKnown RBP12.33□□□□□ -0.44
SPPL3-208ENST00000543854 XCL1P47992 114 aa12.33□□□□□ -0.44
SPPL3-208ENST00000543854 RPL32P62910 135 aaKnown RBP12.33□□□□□ -0.44
SPPL3-208ENST00000543854 ZNF664Q8N3J9 261 aa12.33□□□□□ -0.44
SPPL3-208ENST00000543854 SMIM2Q9BVW6 85 aa12.33□□□□□ -0.44
SPPL3-208ENST00000543854 SRRM2Q9UQ35 2752 aaKnown RBP12.33□□□□□ -0.44
SPPL3-208ENST00000543854 CCL25O15444 150 aa12.32□□□□□ -0.44
SPPL3-208ENST00000543854 FOXI1Q12951 378 aa12.32□□□□□ -0.44
SPPL3-208ENST00000543854 TMEM18Q96B42 140 aa12.32□□□□□ -0.44
SPPL3-208ENST00000543854 UBE2D4Q9Y2X8 147 aa12.32□□□□□ -0.44
SPPL3-208ENST00000543854 PHOX2AO14813 284 aa12.31□□□□□ -0.44
SPPL3-208ENST00000543854 NPYP01303 97 aa12.31□□□□□ -0.44
SPPL3-208ENST00000543854 SS18Q15532 418 aa12.31□□□□□ -0.44
SPPL3-208ENST00000543854 UQCC3Q6UW78 93 aa12.31□□□□□ -0.44
SPPL3-208ENST00000543854 ORMDL3Q8N138 153 aa12.31□□□□□ -0.44
SPPL3-208ENST00000543854 CSDC2Q9Y534 153 aaKnown RBP12.31□□□□□ -0.44
SPPL3-208ENST00000543854 IGHV3-64A0A075B6Q5 118 aa12.3□□□□□ -0.44
SPPL3-208ENST00000543854 HIGD2BQ4VC39 106 aa12.3□□□□□ -0.44
SPPL3-208ENST00000543854 GVQW2A0A096LPI5 108 aaPredicted RBP12.29□□□□□ -0.44
SPPL3-208ENST00000543854 IFITM2Q01629 132 aa12.29□□□□□ -0.44
SPPL3-208ENST00000543854 SDIM1Q6ZPB5 146 aa12.29□□□□□ -0.44
SPPL3-208ENST00000543854 SLPIP03973 132 aa12.28□□□□□ -0.44
SPPL3-208ENST00000543854 TIMM21Q9BVV7 248 aa12.28□□□□□ -0.44
SPPL3-208ENST00000543854 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.28□□□□□ -0.44
SPPL3-208ENST00000543854 MYCBP2O75592 4640 aa12.27□□□□□ -0.45
SPPL3-208ENST00000543854 CD164L2Q6UWJ8 174 aa12.27□□□□□ -0.45
SPPL3-208ENST00000543854 TMEM136Q6ZRR5 245 aa12.27□□□□□ -0.45
SPPL3-208ENST00000543854 Q6ZUT4 128 aa12.27□□□□□ -0.45
SPPL3-208ENST00000543854 PRELID3AQ96N28 172 aa12.27□□□□□ -0.45
SPPL3-208ENST00000543854 IGHV1-58A0A0C4DH39 117 aa12.26□□□□□ -0.45
SPPL3-208ENST00000543854 ADCYAP1P18509 176 aa12.26□□□□□ -0.45
SPPL3-208ENST00000543854 RNASE13Q5GAN3 156 aaKnown RBP12.26□□□□□ -0.45
SPPL3-208ENST00000543854 C1orf196B1AJZ1 125 aa12.25□□□□□ -0.45
SPPL3-208ENST00000543854 LAMTOR2Q9Y2Q5 125 aa12.25□□□□□ -0.45
SPPL3-208ENST00000543854 FLG2Q5D862 2391 aaPredicted RBP12.25□□□□□ -0.45
SPPL3-208ENST00000543854 TRAV13-1A0A0B4J241 112 aa12.24□□□□□ -0.45
SPPL3-208ENST00000543854 TMEM218A2RU14 115 aa12.24□□□□□ -0.45
SPPL3-208ENST00000543854 PANO1I0J062 215 aa12.24□□□□□ -0.45
SPPL3-208ENST00000543854 RAB5AP20339 215 aa12.24□□□□□ -0.45
SPPL3-208ENST00000543854 RPL39P62891 51 aaKnown RBP12.24□□□□□ -0.45
SPPL3-208ENST00000543854 SPANXA1Q9NS26 97 aa12.24□□□□□ -0.45
SPPL3-208ENST00000543854 IMMP2LQ96T52 175 aa12.23□□□□□ -0.45
SPPL3-208ENST00000543854 COX7A2LO14548 114 aa12.22□□□□□ -0.45
SPPL3-208ENST00000543854 MALP21145 153 aa12.22□□□□□ -0.45
SPPL3-208ENST00000543854 CIRBPQ14011 172 aaKnown RBP12.22□□□□□ -0.45
SPPL3-208ENST00000543854 MAP1LC3AQ9H492 121 aa12.22□□□□□ -0.45
SPPL3-208ENST00000543854 CHTF8P0CG12 524 aa12.21□□□□□ -0.45
SPPL3-208ENST00000543854 COMMD7Q86VX2 200 aa12.21□□□□□ -0.45
SPPL3-208ENST00000543854 SEC11CQ9BY50 192 aa12.21□□□□□ -0.45
SPPL3-208ENST00000543854 CTDSP1Q9GZU7 261 aa12.21□□□□□ -0.45
SPPL3-208ENST00000543854 DMBT1Q9UGM3 2413 aaPredicted RBP12.2□□□□□ -0.46
SPPL3-208ENST00000543854 ZNF561-AS1K7EIQ3 104 aa12.2□□□□□ -0.46
SPPL3-208ENST00000543854 SPACA4Q8TDM5 124 aa12.2□□□□□ -0.46
SPPL3-208ENST00000543854 LOC389332A0A1B0GUA5 103 aa12.19□□□□□ -0.46
SPPL3-208ENST00000543854 IFI27P40305 119 aaPredicted RBP12.19□□□□□ -0.46
SPPL3-208ENST00000543854 RPL37AP61513 92 aaKnown RBP12.19□□□□□ -0.46
SPPL3-208ENST00000543854 MRPS36P82909 103 aaKnown RBP12.19□□□□□ -0.46
SPPL3-208ENST00000543854 COX6A2Q02221 97 aa12.19□□□□□ -0.46
SPPL3-208ENST00000543854 DPH3Q96FX2 82 aa12.19□□□□□ -0.46
SPPL3-208ENST00000543854 CARD19Q96LW7 228 aa12.19□□□□□ -0.46
SPPL3-208ENST00000543854 PKIGQ9Y2B9 76 aa12.19□□□□□ -0.46
SPPL3-208ENST00000543854 PRSS47A8MTI9 375 aa12.18□□□□□ -0.46
SPPL3-208ENST00000543854 LINC00526Q96FQ7 95 aa12.18□□□□□ -0.46
SPPL3-208ENST00000543854 TRAV9-1A0A075B6T8 112 aa12.17□□□□□ -0.46
SPPL3-208ENST00000543854 KRTAP10-4P60372 401 aaPredicted RBP12.17□□□□□ -0.46
SPPL3-208ENST00000543854 A0A087WYN8 130 aa12.16□□□□□ -0.46
SPPL3-208ENST00000543854 IFITM10A6NMD0 228 aa12.16□□□□□ -0.46
SPPL3-208ENST00000543854 Q8N8P6 123 aa12.16□□□□□ -0.46
SPPL3-208ENST00000543854 PRSS3P2Q8NHM4 247 aa12.16□□□□□ -0.46
SPPL3-208ENST00000543854 OPRPNQ99935 248 aaPredicted RBP12.16□□□□□ -0.46
SPPL3-208ENST00000543854 IGKV2-24A0A0C4DH68 120 aa12.15□□□□□ -0.46
SPPL3-208ENST00000543854 APOMO95445 188 aa12.15□□□□□ -0.46
SPPL3-208ENST00000543854 S100PP25815 95 aa12.15□□□□□ -0.46
SPPL3-208ENST00000543854 SYCNQ0VAF6 134 aa12.15□□□□□ -0.46
SPPL3-208ENST00000543854 C5orf38Q86SI9 138 aa12.15□□□□□ -0.46
SPPL3-208ENST00000543854 FAM104AQ969W3 186 aa12.15□□□□□ -0.46
SPPL3-208ENST00000543854 HERC1Q15751 4861 aa12.15□□□□□ -0.47
SPPL3-208ENST00000543854 CYSLTR1Q9Y271 337 aa12.14□□□□□ -0.47
SPPL3-208ENST00000543854 PYGO1Q9Y3Y4 419 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms