RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 C7orf77A4D0Y5 90 aa4.59□□□□□ -1.67
NUP43-206ENST00000543637 LINC00862A6NCI5 91 aa4.59□□□□□ -1.67
NUP43-206ENST00000543637 TCAPO15273 167 aa4.59□□□□□ -1.67
NUP43-206ENST00000543637 CCL25O15444 150 aa4.59□□□□□ -1.67
NUP43-206ENST00000543637 S100A8P05109 93 aa4.59□□□□□ -1.67
NUP43-206ENST00000543637 ESDP10768 282 aa4.59□□□□□ -1.67
NUP43-206ENST00000543637 MALP21145 153 aa4.59□□□□□ -1.67
NUP43-206ENST00000543637 XCL1P47992 114 aa4.59□□□□□ -1.67
NUP43-206ENST00000543637 POLR2KP53803 58 aaKnown RBP4.59□□□□□ -1.67
NUP43-206ENST00000543637 HIGD2BQ4VC39 106 aa4.59□□□□□ -1.67
NUP43-206ENST00000543637 ZNF664Q8N3J9 261 aa4.59□□□□□ -1.67
NUP43-206ENST00000543637 NUP35Q8NFH5 326 aa4.59□□□□□ -1.67
NUP43-206ENST00000543637 ISOC2Q96AB3 205 aa4.59□□□□□ -1.67
NUP43-206ENST00000543637 TMEM242Q9NWH2 141 aa4.59□□□□□ -1.67
NUP43-206ENST00000543637 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.59□□□□□ -1.67
NUP43-206ENST00000543637 V9GYV3 84 aa4.59□□□□□ -1.67
NUP43-206ENST00000543637 APOBP04114 4563 aaKnown RBP4.59□□□□□ -1.68
NUP43-206ENST00000543637 A0A087WYN8 130 aa4.58□□□□□ -1.68
NUP43-206ENST00000543637 TRBV27A0A0K0K1C4 114 aa4.58□□□□□ -1.68
NUP43-206ENST00000543637 C1orf196B1AJZ1 125 aa4.58□□□□□ -1.68
NUP43-206ENST00000543637 F8W036 122 aa4.58□□□□□ -1.68
NUP43-206ENST00000543637 TSHBP01222 138 aa4.58□□□□□ -1.68
NUP43-206ENST00000543637 CKS2P33552 79 aa4.58□□□□□ -1.68
NUP43-206ENST00000543637 CAMPP49913 170 aa4.58□□□□□ -1.68
NUP43-206ENST00000543637 SUMO2P61956 95 aaKnown RBP4.58□□□□□ -1.68
NUP43-206ENST00000543637 RPL23P62829 140 aaKnown RBP4.58□□□□□ -1.68
NUP43-206ENST00000543637 COX6A2Q02221 97 aa4.58□□□□□ -1.68
NUP43-206ENST00000543637 MAJINQ3KP22 176 aa4.58□□□□□ -1.68
NUP43-206ENST00000543637 FAM104BQ5XKR9 115 aa4.58□□□□□ -1.68
NUP43-206ENST00000543637 CD164L2Q6UWJ8 174 aa4.58□□□□□ -1.68
NUP43-206ENST00000543637 MRPL52Q86TS9 123 aaKnown RBP4.58□□□□□ -1.68
NUP43-206ENST00000543637 C15orf56Q8N910 161 aa4.58□□□□□ -1.68
NUP43-206ENST00000543637 CDC42SE2Q9NRR3 84 aa4.58□□□□□ -1.68
NUP43-206ENST00000543637 LINC00474Q9P2X8 69 aa4.58□□□□□ -1.68
NUP43-206ENST00000543637 DNAH5Q8TE73 4624 aa4.57□□□□□ -1.68
NUP43-206ENST00000543637 IGKV2-24A0A0C4DH68 120 aa4.57□□□□□ -1.68
NUP43-206ENST00000543637 SMKR1H3BMG3 65 aa4.57□□□□□ -1.68
NUP43-206ENST00000543637 APOMO95445 188 aa4.57□□□□□ -1.68
NUP43-206ENST00000543637 SLPIP03973 132 aa4.57□□□□□ -1.68
NUP43-206ENST00000543637 FOXI1Q12951 378 aa4.57□□□□□ -1.68
NUP43-206ENST00000543637 Q6ZRU5 148 aa4.57□□□□□ -1.68
NUP43-206ENST00000543637 C20orf78Q9BR46 151 aa4.57□□□□□ -1.68
NUP43-206ENST00000543637 GVQW2A0A096LPI5 108 aaPredicted RBP4.56□□□□□ -1.68
NUP43-206ENST00000543637 SMIM27A0A1W2PRY6 76 aa4.56□□□□□ -1.68
NUP43-206ENST00000543637 PANO1I0J062 215 aa4.56□□□□□ -1.68
NUP43-206ENST00000543637 GAS8-AS1O95177 125 aa4.56□□□□□ -1.68
NUP43-206ENST00000543637 SYCNQ0VAF6 134 aa4.56□□□□□ -1.68
NUP43-206ENST00000543637 CIRBPQ14011 172 aaKnown RBP4.56□□□□□ -1.68
NUP43-206ENST00000543637 MRPL51Q4U2R6 128 aaKnown RBP4.56□□□□□ -1.68
NUP43-206ENST00000543637 STPG4Q8N801 248 aa4.56□□□□□ -1.68
NUP43-206ENST00000543637 PRSS3P2Q8NHM4 247 aa4.56□□□□□ -1.68
NUP43-206ENST00000543637 SPACA4Q8TDM5 124 aa4.56□□□□□ -1.68
NUP43-206ENST00000543637 CSDC2Q9Y534 153 aaKnown RBP4.56□□□□□ -1.68
NUP43-206ENST00000543637 A0A1B0GVG6 124 aa4.55□□□□□ -1.68
NUP43-206ENST00000543637 COX7A2LO14548 114 aa4.55□□□□□ -1.68
NUP43-206ENST00000543637 TNFRSF6BO95407 300 aa4.55□□□□□ -1.68
NUP43-206ENST00000543637 PPBPP02775 128 aa4.55□□□□□ -1.68
NUP43-206ENST00000543637 CHTF8P0CG12 524 aa4.55□□□□□ -1.68
NUP43-206ENST00000543637 RAB5AP20339 215 aa4.55□□□□□ -1.68
NUP43-206ENST00000543637 KRTAP10-4P60372 401 aaPredicted RBP4.55□□□□□ -1.68
NUP43-206ENST00000543637 RAB14P61106 215 aa4.55□□□□□ -1.68
NUP43-206ENST00000543637 MRPL54Q6P161 138 aaKnown RBP4.55□□□□□ -1.68
NUP43-206ENST00000543637 CARD19Q96LW7 228 aa4.55□□□□□ -1.68
NUP43-206ENST00000543637 TIMM21Q9BVV7 248 aa4.55□□□□□ -1.68
NUP43-206ENST00000543637 KRTAP4-8Q9BYQ9 185 aa4.55□□□□□ -1.68
NUP43-206ENST00000543637 PLAC8Q9NZF1 115 aa4.55□□□□□ -1.68
NUP43-206ENST00000543637 UBE2D4Q9Y2X8 147 aa4.55□□□□□ -1.68
NUP43-206ENST00000543637 IGLV4-69A0A075B6H9 119 aa4.54□□□□□ -1.68
NUP43-206ENST00000543637 TRBV24-1A0A075B6N3 115 aa4.54□□□□□ -1.68
NUP43-206ENST00000543637 TRAV13-1A0A0B4J241 112 aa4.54□□□□□ -1.68
NUP43-206ENST00000543637 LOC107984640A0A0U1RRK4 108 aa4.54□□□□□ -1.68
NUP43-206ENST00000543637 PHOX2AO14813 284 aa4.54□□□□□ -1.68
NUP43-206ENST00000543637 RPL32P62910 135 aaKnown RBP4.54□□□□□ -1.68
NUP43-206ENST00000543637 HBBP68871 147 aa4.54□□□□□ -1.68
NUP43-206ENST00000543637 NRACQ8N912 160 aa4.54□□□□□ -1.68
NUP43-206ENST00000543637 LINC00526Q96FQ7 95 aa4.54□□□□□ -1.68
NUP43-206ENST00000543637 CAMK2N2Q96S95 79 aa4.54□□□□□ -1.68
NUP43-206ENST00000543637 A0A096LNI7 61 aa4.53□□□□□ -1.68
NUP43-206ENST00000543637 C9JQL5 133 aa4.53□□□□□ -1.68
NUP43-206ENST00000543637 D6R8Y8 96 aa4.53□□□□□ -1.68
NUP43-206ENST00000543637 SRSF3P84103 164 aaKnown RBP4.53□□□□□ -1.68
NUP43-206ENST00000543637 GAGE2BQ13066 116 aa4.53□□□□□ -1.68
NUP43-206ENST00000543637 RNASE13Q5GAN3 156 aaKnown RBP4.53□□□□□ -1.68
NUP43-206ENST00000543637 C5orf38Q86SI9 138 aa4.53□□□□□ -1.68
NUP43-206ENST00000543637 C2orf48Q96LS8 159 aa4.53□□□□□ -1.68
NUP43-206ENST00000543637 F8WDY8 70 aa4.52□□□□□ -1.69
NUP43-206ENST00000543637 MT-ND4LP03901 98 aa4.52□□□□□ -1.69
NUP43-206ENST00000543637 IFI27P40305 119 aaPredicted RBP4.52□□□□□ -1.69
NUP43-206ENST00000543637 PNRC1Q12796 327 aaPredicted RBP4.52□□□□□ -1.69
NUP43-206ENST00000543637 TMEM136Q6ZRR5 245 aa4.52□□□□□ -1.69
NUP43-206ENST00000543637 ATP5L2Q7Z4Y8 100 aa4.52□□□□□ -1.69
NUP43-206ENST00000543637 ORMDL3Q8N138 153 aa4.52□□□□□ -1.69
NUP43-206ENST00000543637 ANAPC16Q96DE5 110 aa4.52□□□□□ -1.69
NUP43-206ENST00000543637 PRELID3AQ96N28 172 aa4.52□□□□□ -1.69
NUP43-206ENST00000543637 SMIM2Q9BVW6 85 aa4.52□□□□□ -1.69
NUP43-206ENST00000543637 SPANXA1Q9NS26 97 aa4.52□□□□□ -1.69
NUP43-206ENST00000543637 HNRNPA3P51991 378 aaKnown RBP4.51□□□□□ -1.69
NUP43-206ENST00000543637 RPL39P62891 51 aaKnown RBP4.51□□□□□ -1.69
NUP43-206ENST00000543637 Q6ZRP5 223 aa4.51□□□□□ -1.69
NUP43-206ENST00000543637 OR10D4PQ8NGN7 298 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms