RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 OR5A1Q8NGJ0 315 aa9.19□□□□□ -0.94
VPS37B-204ENST00000543590 AP5S1Q9NUS5 200 aa9.19□□□□□ -0.94
VPS37B-204ENST00000543590 A0A1B0GW15 77 aa9.18□□□□□ -0.94
VPS37B-204ENST00000543590 C7orf77A4D0Y5 90 aa9.18□□□□□ -0.94
VPS37B-204ENST00000543590 SUMO2P61956 95 aaKnown RBP9.18□□□□□ -0.94
VPS37B-204ENST00000543590 MRPL52Q86TS9 123 aaKnown RBP9.18□□□□□ -0.94
VPS37B-204ENST00000543590 C15orf56Q8N910 161 aa9.18□□□□□ -0.94
VPS37B-204ENST00000543590 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.18□□□□□ -0.94
VPS37B-204ENST00000543590 DNAH8Q96JB1 4490 aa9.18□□□□□ -0.94
VPS37B-204ENST00000543590 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.17□□□□□ -0.94
VPS37B-204ENST00000543590 FCER1GP30273 86 aa9.17□□□□□ -0.94
VPS37B-204ENST00000543590 LINC00959A0A1B0GUT2 108 aa9.16□□□□□ -0.94
VPS37B-204ENST00000543590 PANO1I0J062 215 aa9.16□□□□□ -0.94
VPS37B-204ENST00000543590 PPP1R2P9O14990 202 aa9.16□□□□□ -0.94
VPS37B-204ENST00000543590 FOXI1Q12951 378 aa9.16□□□□□ -0.94
VPS37B-204ENST00000543590 MRPL54Q6P161 138 aaKnown RBP9.16□□□□□ -0.94
VPS37B-204ENST00000543590 KIR2DL4Q99706 377 aa9.16□□□□□ -0.94
VPS37B-204ENST00000543590 CDC42SE2Q9NRR3 84 aa9.16□□□□□ -0.94
VPS37B-204ENST00000543590 IGHV3-64A0A075B6Q5 118 aa9.15□□□□□ -0.94
VPS37B-204ENST00000543590 S100A8P05109 93 aa9.15□□□□□ -0.94
VPS37B-204ENST00000543590 CKS2P33552 79 aa9.15□□□□□ -0.94
VPS37B-204ENST00000543590 XCL1P47992 114 aa9.15□□□□□ -0.94
VPS37B-204ENST00000543590 KRTAP10-4P60372 401 aaPredicted RBP9.15□□□□□ -0.94
VPS37B-204ENST00000543590 HBBP68871 147 aa9.15□□□□□ -0.94
VPS37B-204ENST00000543590 HIGD2BQ4VC39 106 aa9.15□□□□□ -0.94
VPS37B-204ENST00000543590 ZNF664Q8N3J9 261 aa9.15□□□□□ -0.94
VPS37B-204ENST00000543590 TRBV24-1A0A075B6N3 115 aa9.15□□□□□ -0.95
VPS37B-204ENST00000543590 A0A1B0GXF2 115 aa9.15□□□□□ -0.95
VPS37B-204ENST00000543590 CCL25O15444 150 aa9.15□□□□□ -0.95
VPS37B-204ENST00000543590 C20orf78Q9BR46 151 aa9.15□□□□□ -0.95
VPS37B-204ENST00000543590 VPS13BQ7Z7G8 4022 aa9.14□□□□□ -0.95
VPS37B-204ENST00000543590 DMBT1Q9UGM3 2413 aaPredicted RBP9.14□□□□□ -0.95
VPS37B-204ENST00000543590 GVQW2A0A096LPI5 108 aaPredicted RBP9.14□□□□□ -0.95
VPS37B-204ENST00000543590 F8W036 122 aa9.14□□□□□ -0.95
VPS37B-204ENST00000543590 CIRBPQ14011 172 aaKnown RBP9.14□□□□□ -0.95
VPS37B-204ENST00000543590 SS18Q15532 418 aa9.14□□□□□ -0.95
VPS37B-204ENST00000543590 UQCC3Q6UW78 93 aa9.14□□□□□ -0.95
VPS37B-204ENST00000543590 TNFRSF6BO95407 300 aa9.13□□□□□ -0.95
VPS37B-204ENST00000543590 RPL32P62910 135 aaKnown RBP9.13□□□□□ -0.95
VPS37B-204ENST00000543590 UBE2D4Q9Y2X8 147 aa9.13□□□□□ -0.95
VPS37B-204ENST00000543590 CSDC2Q9Y534 153 aaKnown RBP9.13□□□□□ -0.95
VPS37B-204ENST00000543590 D6R8Y8 96 aa9.12□□□□□ -0.95
VPS37B-204ENST00000543590 CHTF8P0CG12 524 aa9.11□□□□□ -0.95
VPS37B-204ENST00000543590 SMAGPQ0VAQ4 97 aa9.11□□□□□ -0.95
VPS37B-204ENST00000543590 PNRC1Q12796 327 aaPredicted RBP9.11□□□□□ -0.95
VPS37B-204ENST00000543590 CD164L2Q6UWJ8 174 aa9.11□□□□□ -0.95
VPS37B-204ENST00000543590 ATP5L2Q7Z4Y8 100 aa9.11□□□□□ -0.95
VPS37B-204ENST00000543590 DPH3Q96FX2 82 aa9.11□□□□□ -0.95
VPS37B-204ENST00000543590 IGHV1-58A0A0C4DH39 117 aa9.1□□□□□ -0.95
VPS37B-204ENST00000543590 NPYP01303 97 aa9.1□□□□□ -0.95
VPS37B-204ENST00000543590 PPBPP02775 128 aa9.1□□□□□ -0.95
VPS37B-204ENST00000543590 RPL37AP61513 92 aaKnown RBP9.1□□□□□ -0.95
VPS37B-204ENST00000543590 RNASE13Q5GAN3 156 aaKnown RBP9.1□□□□□ -0.95
VPS37B-204ENST00000543590 TMEM18Q96B42 140 aa9.1□□□□□ -0.95
VPS37B-204ENST00000543590 TIMM21Q9BVV7 248 aa9.1□□□□□ -0.95
VPS37B-204ENST00000543590 SMIM2Q9BVW6 85 aa9.1□□□□□ -0.95
VPS37B-204ENST00000543590 C1orf196B1AJZ1 125 aa9.09□□□□□ -0.95
VPS37B-204ENST00000543590 PHOX2AO14813 284 aa9.09□□□□□ -0.95
VPS37B-204ENST00000543590 TCAPO15273 167 aa9.09□□□□□ -0.95
VPS37B-204ENST00000543590 MT-ND4LP03901 98 aa9.09□□□□□ -0.95
VPS37B-204ENST00000543590 COX6A2Q02221 97 aa9.09□□□□□ -0.95
VPS37B-204ENST00000543590 SPACA4Q8TDM5 124 aa9.09□□□□□ -0.95
VPS37B-204ENST00000543590 A0A087WYN8 130 aa9.08□□□□□ -0.96
VPS37B-204ENST00000543590 Q6ZUT4 128 aa9.08□□□□□ -0.96
VPS37B-204ENST00000543590 PRSS3P2Q8NHM4 247 aa9.08□□□□□ -0.96
VPS37B-204ENST00000543590 ANAPC16Q96DE5 110 aa9.08□□□□□ -0.96
VPS37B-204ENST00000543590 TRAV13-1A0A0B4J241 112 aa9.08□□□□□ -0.96
VPS37B-204ENST00000543590 J3QL48 77 aa9.08□□□□□ -0.96
VPS37B-204ENST00000543590 RPL39P62891 51 aaKnown RBP9.08□□□□□ -0.96
VPS37B-204ENST00000543590 TMEM136Q6ZRR5 245 aa9.08□□□□□ -0.96
VPS37B-204ENST00000543590 ORMDL3Q8N138 153 aa9.08□□□□□ -0.96
VPS37B-204ENST00000543590 LINC00526Q96FQ7 95 aa9.08□□□□□ -0.96
VPS37B-204ENST00000543590 KRTAP29-1A8MX34 341 aaPredicted RBP9.07□□□□□ -0.96
VPS37B-204ENST00000543590 PRELID3AQ96N28 172 aa9.07□□□□□ -0.96
VPS37B-204ENST00000543590 COX7A2LO14548 114 aa9.06□□□□□ -0.96
VPS37B-204ENST00000543590 SPANXA1Q9NS26 97 aa9.06□□□□□ -0.96
VPS37B-204ENST00000543590 PLAC8Q9NZF1 115 aa9.06□□□□□ -0.96
VPS37B-204ENST00000543590 ZNF561-AS1K7EIQ3 104 aa9.05□□□□□ -0.96
VPS37B-204ENST00000543590 MALP21145 153 aa9.05□□□□□ -0.96
VPS37B-204ENST00000543590 C10orf91Q5T1B1 145 aa9.05□□□□□ -0.96
VPS37B-204ENST00000543590 FAM104AQ969W3 186 aa9.05□□□□□ -0.96
VPS37B-204ENST00000543590 MYCBP2O75592 4640 aa9.05□□□□□ -0.96
VPS37B-204ENST00000543590 IGKV2-24A0A0C4DH68 120 aa9.04□□□□□ -0.96
VPS37B-204ENST00000543590 TMEM218A2RU14 115 aa9.04□□□□□ -0.96
VPS37B-204ENST00000543590 SCO1O75880 301 aa9.04□□□□□ -0.96
VPS37B-204ENST00000543590 SYCNQ0VAF6 134 aa9.04□□□□□ -0.96
VPS37B-204ENST00000543590 MAJINQ3KP22 176 aa9.04□□□□□ -0.96
VPS37B-204ENST00000543590 CARD19Q96LW7 228 aa9.04□□□□□ -0.96
VPS37B-204ENST00000543590 OPRPNQ99935 248 aaPredicted RBP9.04□□□□□ -0.96
VPS37B-204ENST00000543590 TMA7Q9Y2S6 64 aaKnown RBP9.04□□□□□ -0.96
VPS37B-204ENST00000543590 A0A096LNI7 61 aa9.03□□□□□ -0.96
VPS37B-204ENST00000543590 RAB5AP20339 215 aa9.03□□□□□ -0.96
VPS37B-204ENST00000543590 HNRNPA3P51991 378 aaKnown RBP9.03□□□□□ -0.96
VPS37B-204ENST00000543590 MRPS36P82909 103 aaKnown RBP9.03□□□□□ -0.96
VPS37B-204ENST00000543590 C5orf38Q86SI9 138 aa9.03□□□□□ -0.96
VPS37B-204ENST00000543590 LAMTOR2Q9Y2Q5 125 aa9.03□□□□□ -0.96
VPS37B-204ENST00000543590 CARHSP1Q9Y2V2 147 aaKnown RBP9.03□□□□□ -0.96
VPS37B-204ENST00000543590 IGLV4-69A0A075B6H9 119 aa9.02□□□□□ -0.96
VPS37B-204ENST00000543590 LOC105371267A0A1B0GV96 52 aa9.02□□□□□ -0.96
VPS37B-204ENST00000543590 PRSS47A8MTI9 375 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms