RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 BAALC-AS2P0C853 105 aa17.1■□□□□ 0.33
SHD-201ENST00000543264 UCNP55089 124 aa17.1■□□□□ 0.33
SHD-201ENST00000543264 IMUPQ9GZP8 106 aa17.1■□□□□ 0.33
SHD-201ENST00000543264 PIEZO1Q92508 2521 aa17.1■□□□□ 0.33
SHD-201ENST00000543264 LINC00242Q5T6M2 205 aa17.1■□□□□ 0.33
SHD-201ENST00000543264 IGLV5-39A0A0G2JS06 123 aa17.09■□□□□ 0.33
SHD-201ENST00000543264 HERVK_113P63121 156 aa17.09■□□□□ 0.33
SHD-201ENST00000543264 DEFB112Q30KQ8 113 aa17.09■□□□□ 0.33
SHD-201ENST00000543264 DNAJC30Q96LL9 226 aa17.09■□□□□ 0.33
SHD-201ENST00000543264 CCL19Q99731 98 aa17.09■□□□□ 0.33
SHD-201ENST00000543264 LY6DQ14210 128 aa17.08■□□□□ 0.33
SHD-201ENST00000543264 ATP5J2P56134 94 aa17.08■□□□□ 0.32
SHD-201ENST00000543264 LINC00643Q86TS7 51 aa17.08■□□□□ 0.32
SHD-201ENST00000543264 TMEM126AQ9H061 195 aa17.08■□□□□ 0.32
SHD-201ENST00000543264 PRIMA1Q86XR5 153 aa17.07■□□□□ 0.32
SHD-201ENST00000543264 TRAV13-1A0A0B4J241 112 aa17.07■□□□□ 0.32
SHD-201ENST00000543264 LINC00694P0DN24 101 aa17.05■□□□□ 0.32
SHD-201ENST00000543264 SMIM1B2RUZ4 78 aa17.05■□□□□ 0.32
SHD-201ENST00000543264 PIK3CD-AS1Q5SR53 167 aa17.05■□□□□ 0.32
SHD-201ENST00000543264 FAM218AQ96MZ4 157 aa17.05■□□□□ 0.32
SHD-201ENST00000543264 BEAN1Q3B7T3 259 aa17.04■□□□□ 0.32
SHD-201ENST00000543264 TMEM89A2RUT3 159 aa17.04■□□□□ 0.32
SHD-201ENST00000543264 TRACP01848 142 aa17.04■□□□□ 0.32
SHD-201ENST00000543264 C11orf72Q8NBR9 251 aa17.04■□□□□ 0.32
SHD-201ENST00000543264 COPS9Q8WXC6 57 aa17.04■□□□□ 0.32
SHD-201ENST00000543264 DEFB136Q30KP8 78 aa17.03■□□□□ 0.32
SHD-201ENST00000543264 SLURP1P55000 103 aa17.03■□□□□ 0.32
SHD-201ENST00000543264 C9orf153Q5TBE3 101 aa17.02■□□□□ 0.32
SHD-201ENST00000543264 C22orf24Q9Y442 160 aa17.02■□□□□ 0.32
SHD-201ENST00000543264 Q9HAA7 133 aa17.01■□□□□ 0.31
SHD-201ENST00000543264 PRORYQ9H606 182 aa17.01■□□□□ 0.31
SHD-201ENST00000543264 RS1O15537 224 aa17■□□□□ 0.31
SHD-201ENST00000543264 GAGE2AQ6NT46 116 aa17■□□□□ 0.31
SHD-201ENST00000543264 C3orf22Q8N5N4 141 aa17■□□□□ 0.31
SHD-201ENST00000543264 B4DSR2 109 aa17■□□□□ 0.31
SHD-201ENST00000543264 C18orf65Q6ZTR6 163 aa17■□□□□ 0.31
SHD-201ENST00000543264 A8MTW9 85 aa16.99■□□□□ 0.31
SHD-201ENST00000543264 CSMD2Q7Z408 3487 aa16.99■□□□□ 0.31
SHD-201ENST00000543264 UBE2E2Q96LR5 201 aa16.98■□□□□ 0.31
SHD-201ENST00000543264 PEMTQ9UBM1 199 aa16.98■□□□□ 0.31
SHD-201ENST00000543264 GNLYP22749 145 aa16.98■□□□□ 0.31
SHD-201ENST00000543264 SDIM1Q6ZPB5 146 aa16.96■□□□□ 0.31
SHD-201ENST00000543264 C2CD3Q4AC94 2353 aa16.96■□□□□ 0.31
SHD-201ENST00000543264 PPDPFQ9H3Y8 114 aa16.96■□□□□ 0.31
SHD-201ENST00000543264 CFAP161Q6P656 301 aa16.95■□□□□ 0.3
SHD-201ENST00000543264 UQCRQO14949 82 aa16.95■□□□□ 0.3
SHD-201ENST00000543264 HIST2H2BCQ6DN03 193 aa16.95■□□□□ 0.3
SHD-201ENST00000543264 HIST2H2BDQ6DRA6 164 aa16.95■□□□□ 0.3
SHD-201ENST00000543264 VPREB3Q9UKI3 123 aa16.95■□□□□ 0.3
SHD-201ENST00000543264 F5H768 121 aa16.94■□□□□ 0.3
SHD-201ENST00000543264 MALP21145 153 aa16.94■□□□□ 0.3
SHD-201ENST00000543264 MAP6D1Q9H9H5 199 aa16.94■□□□□ 0.3
SHD-201ENST00000543264 XCL2Q9UBD3 114 aa16.94■□□□□ 0.3
SHD-201ENST00000543264 INSP01308 110 aa16.93■□□□□ 0.3
SHD-201ENST00000543264 INAFM2P0DMQ5 153 aa16.93■□□□□ 0.3
SHD-201ENST00000543264 NTM-AS1Q6ZSK4 140 aa16.93■□□□□ 0.3
SHD-201ENST00000543264 C5orf38Q86SI9 138 aa16.93■□□□□ 0.3
SHD-201ENST00000543264 TRGV1A0A0A0MS02 117 aa16.92■□□□□ 0.3
SHD-201ENST00000543264 FAM222AQ5U5X8 452 aa16.92■□□□□ 0.3
SHD-201ENST00000543264 FAM19A3Q7Z5A8 133 aa16.92■□□□□ 0.3
SHD-201ENST00000543264 Q96MF0 132 aa16.92■□□□□ 0.3
SHD-201ENST00000543264 CDC42SE2Q9NRR3 84 aa16.91■□□□□ 0.3
SHD-201ENST00000543264 NOTCH3Q9UM47 2321 aa16.91■□□□□ 0.3
SHD-201ENST00000543264 CXCL5P42830 114 aa16.91■□□□□ 0.3
SHD-201ENST00000543264 LINC00526Q96FQ7 95 aa16.91■□□□□ 0.3
SHD-201ENST00000543264 RPL36AP83881 106 aaKnown RBP16.9■□□□□ 0.3
SHD-201ENST00000543264 RPL36ALQ969Q0 106 aaKnown RBP16.9■□□□□ 0.3
SHD-201ENST00000543264 KLK5Q9Y337 293 aaPredicted RBP16.9■□□□□ 0.3
SHD-201ENST00000543264 TRAV13-2A0A0B4J235 113 aa16.9■□□□□ 0.3
SHD-201ENST00000543264 CRPP02741 224 aa16.9■□□□□ 0.3
SHD-201ENST00000543264 ZANQ9Y493 2812 aa16.9■□□□□ 0.3
SHD-201ENST00000543264 ITPR1Q14643 2758 aa16.9■□□□□ 0.3
SHD-201ENST00000543264 ZNF702PQ9H963 129 aa16.89■□□□□ 0.3
SHD-201ENST00000543264 USP9YO00507 2555 aaPredicted RBP16.89■□□□□ 0.29
SHD-201ENST00000543264 ATP5G1P05496 136 aa16.89■□□□□ 0.29
SHD-201ENST00000543264 RPL28P46779 137 aaKnown RBP16.89■□□□□ 0.29
SHD-201ENST00000543264 LINC00337Q8N6G1 96 aa16.89■□□□□ 0.29
SHD-201ENST00000543264 CSDC2Q9Y534 153 aaKnown RBP16.89■□□□□ 0.29
SHD-201ENST00000543264 MIR7-3HGQ8N6C7 128 aa16.88■□□□□ 0.29
SHD-201ENST00000543264 MAPK1IP1LQ8NDC0 245 aa16.87■□□□□ 0.29
SHD-201ENST00000543264 DYNLRB2Q8TF09 96 aa16.87■□□□□ 0.29
SHD-201ENST00000543264 TOMM7Q9P0U1 55 aa16.86■□□□□ 0.29
SHD-201ENST00000543264 CUBNO60494 3623 aa16.86■□□□□ 0.29
SHD-201ENST00000543264 C9orf129Q5T035 196 aaKnown RBP16.86■□□□□ 0.29
SHD-201ENST00000543264 NRGNQ92686 78 aa16.86■□□□□ 0.29
SHD-201ENST00000543264 A0A087WYN8 130 aa16.85■□□□□ 0.29
SHD-201ENST00000543264 K7EQD1 137 aa16.85■□□□□ 0.29
SHD-201ENST00000543264 DNAL4O96015 105 aa16.85■□□□□ 0.29
SHD-201ENST00000543264 PF4P02776 101 aa16.85■□□□□ 0.29
SHD-201ENST00000543264 COX7CP15954 63 aa16.85■□□□□ 0.29
SHD-201ENST00000543264 SND1-IT1Q9HBX3 110 aa16.85■□□□□ 0.29
SHD-201ENST00000543264 IGKV2-28A0A075B6P5 120 aa16.85■□□□□ 0.29
SHD-201ENST00000543264 IGKV2D-28P01615 120 aa16.85■□□□□ 0.29
SHD-201ENST00000543264 KHDC1LQ5JSQ8 128 aa16.84■□□□□ 0.29
SHD-201ENST00000543264 C14orf132Q9NPU4 83 aa16.84■□□□□ 0.29
SHD-201ENST00000543264 MXRA5Q9NR99 2828 aa16.84■□□□□ 0.29
SHD-201ENST00000543264 LOC107984640A0A0U1RRK4 108 aa16.84■□□□□ 0.29
SHD-201ENST00000543264 UBE2L6O14933 153 aa16.84■□□□□ 0.29
SHD-201ENST00000543264 Q6ZTI0 123 aa16.84■□□□□ 0.29
SHD-201ENST00000543264 SMIM11BQ8TCY0 68 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms