RNA–Protein interactions for RNA: ENST00000543046.1

MDM2-229, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 432 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-229ENST00000543046 M0R1B8 84 aa2.69□□□□□ -1.98
MDM2-229ENST00000543046 M0R1W7 72 aa2.69□□□□□ -1.98
MDM2-229ENST00000543046 DNAL4O96015 105 aa2.69□□□□□ -1.98
MDM2-229ENST00000543046 LHBP01229 141 aa2.69□□□□□ -1.98
MDM2-229ENST00000543046 TRGV3P03979 118 aa2.69□□□□□ -1.98
MDM2-229ENST00000543046 RPL27AP46776 148 aaKnown RBP2.69□□□□□ -1.98
MDM2-229ENST00000543046 RPL28P46779 137 aaKnown RBP2.69□□□□□ -1.98
MDM2-229ENST00000543046 RBM3P98179 157 aaKnown RBP2.69□□□□□ -1.98
MDM2-229ENST00000543046 CIRBPQ14011 172 aaKnown RBP2.69□□□□□ -1.98
MDM2-229ENST00000543046 Q1T7F1 81 aa2.69□□□□□ -1.98
MDM2-229ENST00000543046 SPANXN1Q5VSR9 72 aa2.69□□□□□ -1.98
MDM2-229ENST00000543046 VMO1Q7Z5L0 202 aa2.69□□□□□ -1.98
MDM2-229ENST00000543046 MRPL55Q7Z7F7 128 aaKnown RBP2.69□□□□□ -1.98
MDM2-229ENST00000543046 Q8N2B8 174 aa2.69□□□□□ -1.98
MDM2-229ENST00000543046 DSCAMO60469 2012 aa2.68□□□□□ -1.98
MDM2-229ENST00000543046 TNCP24821 2201 aa2.68□□□□□ -1.98
MDM2-229ENST00000543046 TRBV27A0A0K0K1C4 114 aa2.68□□□□□ -1.98
MDM2-229ENST00000543046 JMJD7-PLA2G4BH0Y9G9 81 aa2.68□□□□□ -1.98
MDM2-229ENST00000543046 NDUFS5O43920 106 aa2.68□□□□□ -1.98
MDM2-229ENST00000543046 IGLV3-19P01714 112 aa2.68□□□□□ -1.98
MDM2-229ENST00000543046 IGHV3-30-3P0DP02 117 aa2.68□□□□□ -1.98
MDM2-229ENST00000543046 CCL3P10147 92 aa2.68□□□□□ -1.98
MDM2-229ENST00000543046 RNASE4P34096 147 aaKnown RBP2.68□□□□□ -1.98
MDM2-229ENST00000543046 SNRPD3P62318 126 aaKnown RBP2.68□□□□□ -1.98
MDM2-229ENST00000543046 BLCAPP62952 87 aa2.68□□□□□ -1.98
MDM2-229ENST00000543046 DYNLRB2Q8TF09 96 aa2.68□□□□□ -1.98
MDM2-229ENST00000543046 DEFB127Q9H1M4 99 aa2.68□□□□□ -1.98
MDM2-229ENST00000543046 LINC00474Q9P2X8 69 aa2.68□□□□□ -1.98
MDM2-229ENST00000543046 SEC16AO15027 2179 aa2.68□□□□□ -1.98
MDM2-229ENST00000543046 DSCAML1Q8TD84 2053 aa2.67□□□□□ -1.98
MDM2-229ENST00000543046 IGHV1OR15-1A0A075B7D0 117 aa2.67□□□□□ -1.98
MDM2-229ENST00000543046 A0A087WVE0 104 aa2.67□□□□□ -1.98
MDM2-229ENST00000543046 IGKV2-40A0A087WW87 121 aaPredicted RBP2.67□□□□□ -1.98
MDM2-229ENST00000543046 IGHV7-81A0A0B4J1V7 117 aa2.67□□□□□ -1.98
MDM2-229ENST00000543046 IGKV2D-40P01614 121 aaPredicted RBP2.67□□□□□ -1.98
MDM2-229ENST00000543046 TRBV12-3P01733 135 aa2.67□□□□□ -1.98
MDM2-229ENST00000543046 IGHV3-48P01763 117 aa2.67□□□□□ -1.98
MDM2-229ENST00000543046 MIFP14174 115 aa2.67□□□□□ -1.98
MDM2-229ENST00000543046 LINC00315P59091 139 aa2.67□□□□□ -1.98
MDM2-229ENST00000543046 ESRGQ1W209 222 aa2.67□□□□□ -1.98
MDM2-229ENST00000543046 LCE3AQ5TA76 89 aa2.67□□□□□ -1.98
MDM2-229ENST00000543046 HCP5Q6MZN7 132 aa2.67□□□□□ -1.98
MDM2-229ENST00000543046 LY6G5BQ8NDX9 201 aa2.67□□□□□ -1.98
MDM2-229ENST00000543046 NDUFA12Q9UI09 145 aa2.67□□□□□ -1.98
MDM2-229ENST00000543046 TRAV23DV6A0A075B6W5 121 aa2.66□□□□□ -1.98
MDM2-229ENST00000543046 F8WEM9 126 aa2.66□□□□□ -1.98
MDM2-229ENST00000543046 K7EIM0 57 aa2.66□□□□□ -1.98
MDM2-229ENST00000543046 CCL21O00585 134 aa2.66□□□□□ -1.98
MDM2-229ENST00000543046 NDUFA1O15239 70 aa2.66□□□□□ -1.98
MDM2-229ENST00000543046 RTL8CO15255 209 aa2.66□□□□□ -1.98
MDM2-229ENST00000543046 IGLV1-47P01700 117 aa2.66□□□□□ -1.98
MDM2-229ENST00000543046 KLK9Q2XQG4 91 aa2.66□□□□□ -1.98
MDM2-229ENST00000543046 PHF5AQ7RTV0 110 aaKnown RBP2.66□□□□□ -1.98
MDM2-229ENST00000543046 C6orf223Q8N319 242 aa2.66□□□□□ -1.98
MDM2-229ENST00000543046 C20orf203Q8NBC4 194 aa2.66□□□□□ -1.98
MDM2-229ENST00000543046 LINC00308Q8TCZ7 52 aa2.66□□□□□ -1.98
MDM2-229ENST00000543046 LEAP2Q969E1 77 aa2.66□□□□□ -1.98
MDM2-229ENST00000543046 RPL39LQ96EH5 51 aaKnown RBP2.66□□□□□ -1.98
MDM2-229ENST00000543046 HES7Q9BYE0 225 aa2.66□□□□□ -1.98
MDM2-229ENST00000543046 KLK9Q9UKQ9 250 aa2.66□□□□□ -1.98
MDM2-229ENST00000543046 FREM1Q5H8C1 2179 aa2.66□□□□□ -1.98
MDM2-229ENST00000543046 ZGRF1Q86YA3 2104 aa2.65□□□□□ -1.98
MDM2-229ENST00000543046 TRAV21A0A0B4J279 112 aa2.65□□□□□ -1.99
MDM2-229ENST00000543046 C5orf67F2Z3F1 127 aa2.65□□□□□ -1.99
MDM2-229ENST00000543046 BUB1B-PAK6H3BSN5 160 aa2.65□□□□□ -1.99
MDM2-229ENST00000543046 PANO1I0J062 215 aa2.65□□□□□ -1.99
MDM2-229ENST00000543046 DAD1P61803 113 aa2.65□□□□□ -1.99
MDM2-229ENST00000543046 SS18Q15532 418 aa2.65□□□□□ -1.99
MDM2-229ENST00000543046 C10orf55Q5SWW7 151 aa2.65□□□□□ -1.99
MDM2-229ENST00000543046 KTN1-AS1Q86SY8 53 aa2.65□□□□□ -1.99
MDM2-229ENST00000543046 LINC01560Q8TB33 94 aa2.65□□□□□ -1.99
MDM2-229ENST00000543046 RMI2Q96E14 147 aa2.65□□□□□ -1.99
MDM2-229ENST00000543046 UBL5Q9BZL1 73 aa2.65□□□□□ -1.99
MDM2-229ENST00000543046 RBM12B-AS1Q9P1G2 102 aa2.65□□□□□ -1.99
MDM2-229ENST00000543046 PHLDA3Q9Y5J5 127 aa2.65□□□□□ -1.99
MDM2-229ENST00000543046 PRRC2BQ5JSZ5 2229 aaKnown RBP2.64□□□□□ -1.99
MDM2-229ENST00000543046 A0A0J9YXV3 536 aa2.64□□□□□ -1.99
MDM2-229ENST00000543046 TRBV7-4A0A0J9YYF1 115 aa2.64□□□□□ -1.99
MDM2-229ENST00000543046 E7EQL1 145 aa2.64□□□□□ -1.99
MDM2-229ENST00000543046 F6UB75 175 aa2.64□□□□□ -1.99
MDM2-229ENST00000543046 H3BQ85 93 aa2.64□□□□□ -1.99
MDM2-229ENST00000543046 ZNF861PO60384 105 aa2.64□□□□□ -1.99
MDM2-229ENST00000543046 TFF1P04155 84 aa2.64□□□□□ -1.99
MDM2-229ENST00000543046 CTSGP08311 255 aa2.64□□□□□ -1.99
MDM2-229ENST00000543046 CD28P10747 220 aa2.64□□□□□ -1.99
MDM2-229ENST00000543046 PDE6GP18545 87 aa2.64□□□□□ -1.99
MDM2-229ENST00000543046 FAM19A3Q7Z5A8 133 aa2.64□□□□□ -1.99
MDM2-229ENST00000543046 Q8TAT8 98 aa2.64□□□□□ -1.99
MDM2-229ENST00000543046 CHCHD10Q8WYQ3 142 aaPredicted RBP2.64□□□□□ -1.99
MDM2-229ENST00000543046 ZNF625Q96I27 306 aaPredicted RBP2.64□□□□□ -1.99
MDM2-229ENST00000543046 GAFA1Q96PS6 74 aa2.64□□□□□ -1.99
MDM2-229ENST00000543046 BPESC1Q9GZL8 116 aa2.64□□□□□ -1.99
MDM2-229ENST00000543046 LINC00588Q9Y4M8 146 aa2.64□□□□□ -1.99
MDM2-229ENST00000543046 OBSCNQ5VST9 7968 aa2.63□□□□□ -1.99
MDM2-229ENST00000543046 TRAV12-3A0A0B4J271 114 aa2.63□□□□□ -1.99
MDM2-229ENST00000543046 IGHV1-3A0A0C4DH29 117 aa2.63□□□□□ -1.99
MDM2-229ENST00000543046 hDV103S1A0JD37 113 aa2.63□□□□□ -1.99
MDM2-229ENST00000543046 TMEM256-PLSCR3K7ERE1 68 aa2.63□□□□□ -1.99
MDM2-229ENST00000543046 M0R378 163 aa2.63□□□□□ -1.99
MDM2-229ENST00000543046 RPL39P62891 51 aaKnown RBP2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms