RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 TRBV6-5A0A0K0K1A5 114 aa10.9□□□□□ -0.66
PPP1CA-210ENST00000542876 ZNF561-AS1K7EIQ3 104 aa10.9□□□□□ -0.66
PPP1CA-210ENST00000542876 CLLU1Q5K131 121 aa10.9□□□□□ -0.66
PPP1CA-210ENST00000542876 FAM231BA6NCW3 169 aa10.89□□□□□ -0.67
PPP1CA-210ENST00000542876 REG3GQ6UW15 175 aa10.89□□□□□ -0.67
PPP1CA-210ENST00000542876 SPINK6Q6UWN8 80 aa10.89□□□□□ -0.67
PPP1CA-210ENST00000542876 FAM231DQ6ZW35 169 aa10.89□□□□□ -0.67
PPP1CA-210ENST00000542876 TMEM250H0YL14 139 aa10.88□□□□□ -0.67
PPP1CA-210ENST00000542876 LINC00526Q96FQ7 95 aa10.88□□□□□ -0.67
PPP1CA-210ENST00000542876 TMEM242Q9NWH2 141 aa10.88□□□□□ -0.67
PPP1CA-210ENST00000542876 C9JQL5 133 aa10.87□□□□□ -0.67
PPP1CA-210ENST00000542876 TSHBP01222 138 aa10.87□□□□□ -0.67
PPP1CA-210ENST00000542876 ESDP10768 282 aa10.87□□□□□ -0.67
PPP1CA-210ENST00000542876 CEBPGP53567 150 aa10.87□□□□□ -0.67
PPP1CA-210ENST00000542876 SRSF3P84103 164 aaKnown RBP10.87□□□□□ -0.67
PPP1CA-210ENST00000542876 SYCNQ0VAF6 134 aa10.87□□□□□ -0.67
PPP1CA-210ENST00000542876 CT83Q5H943 113 aa10.87□□□□□ -0.67
PPP1CA-210ENST00000542876 CD164L2Q6UWJ8 174 aa10.87□□□□□ -0.67
PPP1CA-210ENST00000542876 TNXBP22105 4242 aa10.86□□□□□ -0.67
PPP1CA-210ENST00000542876 A0A0J9YXV3 536 aa10.86□□□□□ -0.67
PPP1CA-210ENST00000542876 Q6ZRP5 223 aa10.86□□□□□ -0.67
PPP1CA-210ENST00000542876 MRPL52Q86TS9 123 aaKnown RBP10.86□□□□□ -0.67
PPP1CA-210ENST00000542876 ISOC2Q96AB3 205 aa10.86□□□□□ -0.67
PPP1CA-210ENST00000542876 CDC42SE2Q9NRR3 84 aa10.86□□□□□ -0.67
PPP1CA-210ENST00000542876 LRP2P98164 4655 aa10.85□□□□□ -0.67
PPP1CA-210ENST00000542876 A0A1B0GUT8 65 aa10.85□□□□□ -0.67
PPP1CA-210ENST00000542876 C7orf77A4D0Y5 90 aa10.85□□□□□ -0.67
PPP1CA-210ENST00000542876 MALP21145 153 aa10.85□□□□□ -0.67
PPP1CA-210ENST00000542876 ZNF664Q8N3J9 261 aa10.85□□□□□ -0.67
PPP1CA-210ENST00000542876 TMEM191AQ9H0A3 160 aa10.85□□□□□ -0.67
PPP1CA-210ENST00000542876 SRP19P09132 144 aaKnown RBP10.84□□□□□ -0.67
PPP1CA-210ENST00000542876 FCER1GP30273 86 aa10.84□□□□□ -0.67
PPP1CA-210ENST00000542876 CAMPP49913 170 aa10.84□□□□□ -0.67
PPP1CA-210ENST00000542876 TRBV27A0A0K0K1C4 114 aa10.83□□□□□ -0.68
PPP1CA-210ENST00000542876 HIGD1CA8MV81 97 aa10.83□□□□□ -0.68
PPP1CA-210ENST00000542876 GAS8-AS1O95177 125 aa10.83□□□□□ -0.68
PPP1CA-210ENST00000542876 POLR2KP53803 58 aaKnown RBP10.83□□□□□ -0.68
PPP1CA-210ENST00000542876 RAB14P61106 215 aa10.83□□□□□ -0.68
PPP1CA-210ENST00000542876 SMAGPQ0VAQ4 97 aa10.83□□□□□ -0.68
PPP1CA-210ENST00000542876 TSKUQ8WUA8 353 aa10.83□□□□□ -0.68
PPP1CA-210ENST00000542876 LOC107984640A0A0U1RRK4 108 aa10.82□□□□□ -0.68
PPP1CA-210ENST00000542876 C1orf196B1AJZ1 125 aa10.82□□□□□ -0.68
PPP1CA-210ENST00000542876 PTTG1IPP53801 180 aa10.82□□□□□ -0.68
PPP1CA-210ENST00000542876 GAGE2BQ13066 116 aa10.82□□□□□ -0.68
PPP1CA-210ENST00000542876 EIF5A2Q9GZV4 153 aaKnown RBP10.82□□□□□ -0.68
PPP1CA-210ENST00000542876 IGLV4-69A0A075B6H9 119 aa10.81□□□□□ -0.68
PPP1CA-210ENST00000542876 COX7A2LO14548 114 aa10.81□□□□□ -0.68
PPP1CA-210ENST00000542876 VCYO14598 125 aa10.81□□□□□ -0.68
PPP1CA-210ENST00000542876 RAB4AP20338 218 aa10.81□□□□□ -0.68
PPP1CA-210ENST00000542876 SMIM7Q9BQ49 75 aa10.81□□□□□ -0.68
PPP1CA-210ENST00000542876 PPP1R17O96001 155 aa10.8□□□□□ -0.68
PPP1CA-210ENST00000542876 KRTAP10-8P60410 259 aa10.8□□□□□ -0.68
PPP1CA-210ENST00000542876 SRSF9Q13242 221 aaKnown RBP eCLIP10.8□□□□□ -0.68
PPP1CA-210ENST00000542876 AMN1Q8IY45 258 aa10.8□□□□□ -0.68
PPP1CA-210ENST00000542876 CAMK2N2Q96S95 79 aa10.8□□□□□ -0.68
PPP1CA-210ENST00000542876 SMDT1Q9H4I9 107 aa10.8□□□□□ -0.68
PPP1CA-210ENST00000542876 ODF1Q14990 250 aa10.79□□□□□ -0.68
PPP1CA-210ENST00000542876 LINC01551Q86U37 167 aa10.79□□□□□ -0.68
PPP1CA-210ENST00000542876 KIR2DL4Q99706 377 aa10.79□□□□□ -0.68
PPP1CA-210ENST00000542876 LINC00862A6NCI5 91 aa10.78□□□□□ -0.68
PPP1CA-210ENST00000542876 RIGQ13278 110 aa10.78□□□□□ -0.68
PPP1CA-210ENST00000542876 PEA15Q15121 130 aa10.78□□□□□ -0.68
PPP1CA-210ENST00000542876 OSTCQ9NRP0 149 aa10.78□□□□□ -0.68
PPP1CA-210ENST00000542876 CSDC2Q9Y534 153 aaKnown RBP10.78□□□□□ -0.68
PPP1CA-210ENST00000542876 TRAV13-1A0A0B4J241 112 aa10.77□□□□□ -0.69
PPP1CA-210ENST00000542876 ZNF727A8MUV8 499 aa10.77□□□□□ -0.69
PPP1CA-210ENST00000542876 APOMO95445 188 aa10.77□□□□□ -0.69
PPP1CA-210ENST00000542876 NUP35Q8NFH5 326 aa10.77□□□□□ -0.69
PPP1CA-210ENST00000542876 TMEM18Q96B42 140 aa10.77□□□□□ -0.69
PPP1CA-210ENST00000542876 SMKR1H3BMG3 65 aa10.76□□□□□ -0.69
PPP1CA-210ENST00000542876 SUMO2P61956 95 aaKnown RBP10.76□□□□□ -0.69
PPP1CA-210ENST00000542876 RNASE13Q5GAN3 156 aaKnown RBP10.76□□□□□ -0.69
PPP1CA-210ENST00000542876 C2orf48Q96LS8 159 aa10.76□□□□□ -0.69
PPP1CA-210ENST00000542876 UBE2D4Q9Y2X8 147 aa10.76□□□□□ -0.69
PPP1CA-210ENST00000542876 PPP1R2P9O14990 202 aa10.75□□□□□ -0.69
PPP1CA-210ENST00000542876 MT-ND6P03923 174 aa10.75□□□□□ -0.69
PPP1CA-210ENST00000542876 RPL18AQ02543 176 aaKnown RBP10.75□□□□□ -0.69
PPP1CA-210ENST00000542876 A0A1W2PNN7 141 aa10.74□□□□□ -0.69
PPP1CA-210ENST00000542876 C5orf38Q86SI9 138 aa10.74□□□□□ -0.69
PPP1CA-210ENST00000542876 C9orf116Q5BN46 136 aaPredicted RBP10.73□□□□□ -0.69
PPP1CA-210ENST00000542876 UQCC3Q6UW78 93 aa10.73□□□□□ -0.69
PPP1CA-210ENST00000542876 COMMD7Q86VX2 200 aa10.73□□□□□ -0.69
PPP1CA-210ENST00000542876 NRACQ8N912 160 aa10.73□□□□□ -0.69
PPP1CA-210ENST00000542876 RNF213Q63HN8 5207 aa10.73□□□□□ -0.69
PPP1CA-210ENST00000542876 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.72□□□□□ -0.69
PPP1CA-210ENST00000542876 SPAG11BQ08648 103 aa10.72□□□□□ -0.69
PPP1CA-210ENST00000542876 FAM74A3Q4VXF1 159 aa10.72□□□□□ -0.69
PPP1CA-210ENST00000542876 Q6ZUT4 128 aa10.72□□□□□ -0.69
PPP1CA-210ENST00000542876 TIMM21Q9BVV7 248 aa10.72□□□□□ -0.69
PPP1CA-210ENST00000542876 NAT8BQ9UHF3 227 aa10.72□□□□□ -0.69
PPP1CA-210ENST00000542876 PSORS1C2Q9UIG4 136 aa10.72□□□□□ -0.69
PPP1CA-210ENST00000542876 V9GYV3 84 aa10.72□□□□□ -0.69
PPP1CA-210ENST00000542876 ADCYAP1P18509 176 aa10.71□□□□□ -0.69
PPP1CA-210ENST00000542876 TCAPO15273 167 aa10.7□□□□□ -0.7
PPP1CA-210ENST00000542876 RNF151Q2KHN1 245 aa10.7□□□□□ -0.7
PPP1CA-210ENST00000542876 C1orf137Q5JT78 98 aa10.7□□□□□ -0.7
PPP1CA-210ENST00000542876 OR10D4PQ8NGN7 298 aa10.7□□□□□ -0.7
PPP1CA-210ENST00000542876 OPRPNQ99935 248 aaPredicted RBP10.7□□□□□ -0.7
PPP1CA-210ENST00000542876 C20orf78Q9BR46 151 aa10.7□□□□□ -0.7
PPP1CA-210ENST00000542876 RPL23P62829 140 aaKnown RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms