RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 FAM104BQ5XKR9 115 aa11.22□□□□□ -0.61
LTBR-210ENST00000542830 C15orf56Q8N910 161 aa11.22□□□□□ -0.61
LTBR-210ENST00000542830 KIR2DL4Q99706 377 aa11.22□□□□□ -0.61
LTBR-210ENST00000542830 LINC00862A6NCI5 91 aa11.21□□□□□ -0.61
LTBR-210ENST00000542830 S100A8P05109 93 aa11.21□□□□□ -0.61
LTBR-210ENST00000542830 FCER1GP30273 86 aa11.21□□□□□ -0.61
LTBR-210ENST00000542830 NRACQ8N912 160 aa11.21□□□□□ -0.61
LTBR-210ENST00000542830 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.21□□□□□ -0.61
LTBR-210ENST00000542830 SLPIP03973 132 aa11.2□□□□□ -0.62
LTBR-210ENST00000542830 CAMPP49913 170 aa11.2□□□□□ -0.62
LTBR-210ENST00000542830 MRPL51Q4U2R6 128 aaKnown RBP11.2□□□□□ -0.62
LTBR-210ENST00000542830 CDC42SE2Q9NRR3 84 aa11.2□□□□□ -0.62
LTBR-210ENST00000542830 LINC00959A0A1B0GUT2 108 aa11.19□□□□□ -0.62
LTBR-210ENST00000542830 FOXI1Q12951 378 aa11.19□□□□□ -0.62
LTBR-210ENST00000542830 SS18Q15532 418 aa11.19□□□□□ -0.62
LTBR-210ENST00000542830 GVQW2A0A096LPI5 108 aaPredicted RBP11.18□□□□□ -0.62
LTBR-210ENST00000542830 F8W036 122 aa11.18□□□□□ -0.62
LTBR-210ENST00000542830 XCL1P47992 114 aa11.18□□□□□ -0.62
LTBR-210ENST00000542830 CIRBPQ14011 172 aaKnown RBP11.18□□□□□ -0.62
LTBR-210ENST00000542830 ZNF664Q8N3J9 261 aa11.18□□□□□ -0.62
LTBR-210ENST00000542830 C20orf78Q9BR46 151 aa11.18□□□□□ -0.62
LTBR-210ENST00000542830 CSDC2Q9Y534 153 aaKnown RBP11.18□□□□□ -0.62
LTBR-210ENST00000542830 TCAPO15273 167 aa11.17□□□□□ -0.62
LTBR-210ENST00000542830 CCL25O15444 150 aa11.17□□□□□ -0.62
LTBR-210ENST00000542830 CKS2P33552 79 aa11.17□□□□□ -0.62
LTBR-210ENST00000542830 KRTAP10-4P60372 401 aaPredicted RBP11.17□□□□□ -0.62
LTBR-210ENST00000542830 RPL37AP61513 92 aaKnown RBP11.17□□□□□ -0.62
LTBR-210ENST00000542830 HBBP68871 147 aa11.17□□□□□ -0.62
LTBR-210ENST00000542830 HIGD2BQ4VC39 106 aa11.17□□□□□ -0.62
LTBR-210ENST00000542830 TMEM18Q96B42 140 aa11.17□□□□□ -0.62
LTBR-210ENST00000542830 HERC1Q15751 4861 aa11.16□□□□□ -0.62
LTBR-210ENST00000542830 TRBV24-1A0A075B6N3 115 aa11.16□□□□□ -0.62
LTBR-210ENST00000542830 PANO1I0J062 215 aa11.16□□□□□ -0.62
LTBR-210ENST00000542830 J3QL48 77 aa11.16□□□□□ -0.62
LTBR-210ENST00000542830 RAB14P61106 215 aa11.16□□□□□ -0.62
LTBR-210ENST00000542830 RPL32P62910 135 aaKnown RBP11.16□□□□□ -0.62
LTBR-210ENST00000542830 MRPL54Q6P161 138 aaKnown RBP11.16□□□□□ -0.62
LTBR-210ENST00000542830 IGHV1-58A0A0C4DH39 117 aa11.15□□□□□ -0.62
LTBR-210ENST00000542830 CD164L2Q6UWJ8 174 aa11.15□□□□□ -0.62
LTBR-210ENST00000542830 DPH3Q96FX2 82 aa11.15□□□□□ -0.62
LTBR-210ENST00000542830 A0A1B0GXF2 115 aa11.14□□□□□ -0.63
LTBR-210ENST00000542830 KRTAP29-1A8MX34 341 aaPredicted RBP11.14□□□□□ -0.63
LTBR-210ENST00000542830 PPBPP02775 128 aa11.14□□□□□ -0.63
LTBR-210ENST00000542830 PNRC1Q12796 327 aaPredicted RBP11.14□□□□□ -0.63
LTBR-210ENST00000542830 ATP5L2Q7Z4Y8 100 aa11.14□□□□□ -0.63
LTBR-210ENST00000542830 UBE2D4Q9Y2X8 147 aa11.14□□□□□ -0.63
LTBR-210ENST00000542830 C1orf196B1AJZ1 125 aa11.13□□□□□ -0.63
LTBR-210ENST00000542830 PHOX2AO14813 284 aa11.13□□□□□ -0.63
LTBR-210ENST00000542830 TNFRSF6BO95407 300 aa11.13□□□□□ -0.63
LTBR-210ENST00000542830 SPACA4Q8TDM5 124 aa11.13□□□□□ -0.63
LTBR-210ENST00000542830 TIMM21Q9BVV7 248 aa11.13□□□□□ -0.63
LTBR-210ENST00000542830 PKIGQ9Y2B9 76 aa11.13□□□□□ -0.63
LTBR-210ENST00000542830 D6R8Y8 96 aa11.12□□□□□ -0.63
LTBR-210ENST00000542830 COX6A2Q02221 97 aa11.12□□□□□ -0.63
LTBR-210ENST00000542830 A0A087WYN8 130 aa11.11□□□□□ -0.63
LTBR-210ENST00000542830 CHTF8P0CG12 524 aa11.11□□□□□ -0.63
LTBR-210ENST00000542830 SMIM2Q9BVW6 85 aa11.11□□□□□ -0.63
LTBR-210ENST00000542830 ANAPC16Q96DE5 110 aa11.1□□□□□ -0.63
LTBR-210ENST00000542830 ZNF561-AS1K7EIQ3 104 aa11.09□□□□□ -0.63
LTBR-210ENST00000542830 NPYP01303 97 aa11.09□□□□□ -0.63
LTBR-210ENST00000542830 MT-ND4LP03901 98 aa11.09□□□□□ -0.63
LTBR-210ENST00000542830 ORMDL3Q8N138 153 aa11.09□□□□□ -0.63
LTBR-210ENST00000542830 PRSS3P2Q8NHM4 247 aa11.09□□□□□ -0.63
LTBR-210ENST00000542830 TRAV13-1A0A0B4J241 112 aa11.08□□□□□ -0.64
LTBR-210ENST00000542830 COX7A2LO14548 114 aa11.08□□□□□ -0.64
LTBR-210ENST00000542830 OXTP01178 125 aa11.08□□□□□ -0.64
LTBR-210ENST00000542830 MALP21145 153 aa11.08□□□□□ -0.64
LTBR-210ENST00000542830 Q6ZUT4 128 aa11.08□□□□□ -0.64
LTBR-210ENST00000542830 CARD19Q96LW7 228 aa11.08□□□□□ -0.64
LTBR-210ENST00000542830 PLAC8Q9NZF1 115 aa11.08□□□□□ -0.64
LTBR-210ENST00000542830 MAJINQ3KP22 176 aa11.07□□□□□ -0.64
LTBR-210ENST00000542830 RNASE13Q5GAN3 156 aaKnown RBP11.07□□□□□ -0.64
LTBR-210ENST00000542830 TMEM136Q6ZRR5 245 aa11.07□□□□□ -0.64
LTBR-210ENST00000542830 SPANXA1Q9NS26 97 aa11.07□□□□□ -0.64
LTBR-210ENST00000542830 LINC00474Q9P2X8 69 aa11.07□□□□□ -0.64
LTBR-210ENST00000542830 IGKV2-24A0A0C4DH68 120 aa11.06□□□□□ -0.64
LTBR-210ENST00000542830 SYCNQ0VAF6 134 aa11.06□□□□□ -0.64
LTBR-210ENST00000542830 CLLU1Q5K131 121 aa11.06□□□□□ -0.64
LTBR-210ENST00000542830 C7orf33Q8WU49 177 aa11.06□□□□□ -0.64
LTBR-210ENST00000542830 LINC00526Q96FQ7 95 aa11.06□□□□□ -0.64
LTBR-210ENST00000542830 PRELID3AQ96N28 172 aa11.06□□□□□ -0.64
LTBR-210ENST00000542830 RAB5AP20339 215 aa11.05□□□□□ -0.64
LTBR-210ENST00000542830 RPL39P62891 51 aaKnown RBP11.05□□□□□ -0.64
LTBR-210ENST00000542830 LAMTOR2Q9Y2Q5 125 aa11.05□□□□□ -0.64
LTBR-210ENST00000542830 APOMO95445 188 aa11.04□□□□□ -0.64
LTBR-210ENST00000542830 MRPS36P82909 103 aaKnown RBP11.04□□□□□ -0.64
LTBR-210ENST00000542830 PKHD1L1Q86WI1 4243 aa11.04□□□□□ -0.64
LTBR-210ENST00000542830 A0A096LNI7 61 aa11.03□□□□□ -0.64
LTBR-210ENST00000542830 STPG4Q8N801 248 aa11.03□□□□□ -0.64
LTBR-210ENST00000542830 IGLV4-69A0A075B6H9 119 aa11.02□□□□□ -0.65
LTBR-210ENST00000542830 PRSS47A8MTI9 375 aa11.02□□□□□ -0.65
LTBR-210ENST00000542830 HNRNPA3P51991 378 aaKnown RBP11.02□□□□□ -0.65
LTBR-210ENST00000542830 C5orf38Q86SI9 138 aa11.02□□□□□ -0.65
LTBR-210ENST00000542830 LRP1Q07954 4544 aaKnown RBP11.02□□□□□ -0.65
LTBR-210ENST00000542830 IFI27P40305 119 aaPredicted RBP11.01□□□□□ -0.65
LTBR-210ENST00000542830 C2orf48Q96LS8 159 aa11.01□□□□□ -0.65
LTBR-210ENST00000542830 CAMK2N2Q96S95 79 aa11.01□□□□□ -0.65
LTBR-210ENST00000542830 MAP1LC3AQ9H492 121 aa11.01□□□□□ -0.65
LTBR-210ENST00000542830 FAT3Q8TDW7 4589 aa11.01□□□□□ -0.65
LTBR-210ENST00000542830 UQCC3Q6UW78 93 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms