RNA–Protein interactions for RNA: ENST00000542700.6

CHMP4A-209, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3

Gene CHMP4A, Length 847 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-209ENST00000542700 M0QY20 66 aa5.01□□□□□ -1.61
CHMP4A-209ENST00000542700 VCYO14598 125 aa5.01□□□□□ -1.61
CHMP4A-209ENST00000542700 NUPR1O60356 82 aa5.01□□□□□ -1.61
CHMP4A-209ENST00000542700 HSBP1O75506 76 aa5.01□□□□□ -1.61
CHMP4A-209ENST00000542700 SERF1AO75920 110 aa5.01□□□□□ -1.61
CHMP4A-209ENST00000542700 SUMO2P61956 95 aaKnown RBP5.01□□□□□ -1.61
CHMP4A-209ENST00000542700 GAGE1Q13065 139 aa5.01□□□□□ -1.61
CHMP4A-209ENST00000542700 GAGE4Q13068 117 aa5.01□□□□□ -1.61
CHMP4A-209ENST00000542700 GAGE5Q13069 117 aa5.01□□□□□ -1.61
CHMP4A-209ENST00000542700 GAGE13Q4V321 117 aa5.01□□□□□ -1.61
CHMP4A-209ENST00000542700 PDZD11Q5EBL8 140 aa5.01□□□□□ -1.61
CHMP4A-209ENST00000542700 UFSP1Q6NVU6 142 aa5.01□□□□□ -1.61
CHMP4A-209ENST00000542700 LINC00612Q8N6U2 182 aa5.01□□□□□ -1.61
CHMP4A-209ENST00000542700 Q8N8P6 123 aa5.01□□□□□ -1.61
CHMP4A-209ENST00000542700 NRACQ8N912 160 aa5.01□□□□□ -1.61
CHMP4A-209ENST00000542700 DNAJC30Q96LL9 226 aa5.01□□□□□ -1.61
CHMP4A-209ENST00000542700 C20orf78Q9BR46 151 aa5.01□□□□□ -1.61
CHMP4A-209ENST00000542700 PRADC1Q9BSG0 188 aa5.01□□□□□ -1.61
CHMP4A-209ENST00000542700 NXT2Q9NPJ8 142 aaKnown RBP5.01□□□□□ -1.61
CHMP4A-209ENST00000542700 HHLA3Q9XRX5 114 aa5.01□□□□□ -1.61
CHMP4A-209ENST00000542700 A0A0J9YXV3 536 aa5□□□□□ -1.61
CHMP4A-209ENST00000542700 C5orf52A6NGY3 159 aa5□□□□□ -1.61
CHMP4A-209ENST00000542700 PRSS47A8MTI9 375 aa5□□□□□ -1.61
CHMP4A-209ENST00000542700 K7EP13 123 aa5□□□□□ -1.61
CHMP4A-209ENST00000542700 K7EQD1 137 aa5□□□□□ -1.61
CHMP4A-209ENST00000542700 TCAPO15273 167 aa5□□□□□ -1.61
CHMP4A-209ENST00000542700 PAX4O43316 350 aa5□□□□□ -1.61
CHMP4A-209ENST00000542700 RPL36AP83881 106 aaKnown RBP5□□□□□ -1.61
CHMP4A-209ENST00000542700 NEGR1Q7Z3B1 354 aa5□□□□□ -1.61
CHMP4A-209ENST00000542700 C10orf126Q8N4M7 172 aa5□□□□□ -1.61
CHMP4A-209ENST00000542700 SLC25A29Q8N8R3 303 aa5□□□□□ -1.61
CHMP4A-209ENST00000542700 NEXN-AS1Q8NBZ9 246 aa5□□□□□ -1.61
CHMP4A-209ENST00000542700 RPL36ALQ969Q0 106 aaKnown RBP5□□□□□ -1.61
CHMP4A-209ENST00000542700 IGHV3-38A0A0C4DH36 116 aa4.99□□□□□ -1.61
CHMP4A-209ENST00000542700 LOC100131303A0A0U1RQF7 123 aa4.99□□□□□ -1.61
CHMP4A-209ENST00000542700 TRBV6-4A0A1B0GX49 114 aa4.99□□□□□ -1.61
CHMP4A-209ENST00000542700 SDHAF1A6NFY7 115 aa4.99□□□□□ -1.61
CHMP4A-209ENST00000542700 FABP4P15090 132 aa4.99□□□□□ -1.61
CHMP4A-209ENST00000542700 FCER1GP30273 86 aa4.99□□□□□ -1.61
CHMP4A-209ENST00000542700 POLR2KP53803 58 aaKnown RBP4.99□□□□□ -1.61
CHMP4A-209ENST00000542700 KRTAP10-8P60410 259 aa4.99□□□□□ -1.61
CHMP4A-209ENST00000542700 PMCHL1Q16048 86 aa4.99□□□□□ -1.61
CHMP4A-209ENST00000542700 FAM19A2Q8N3H0 131 aa4.99□□□□□ -1.61
CHMP4A-209ENST00000542700 TMEM18Q96B42 140 aa4.99□□□□□ -1.61
CHMP4A-209ENST00000542700 CHCHD1Q96BP2 118 aaKnown RBP4.99□□□□□ -1.61
CHMP4A-209ENST00000542700 URB1-AS1Q96HZ7 61 aa4.99□□□□□ -1.61
CHMP4A-209ENST00000542700 SMIM2Q9BVW6 85 aa4.99□□□□□ -1.61
CHMP4A-209ENST00000542700 Q9UF83 564 aa4.99□□□□□ -1.61
CHMP4A-209ENST00000542700 PRO0255Q9UI72 69 aa4.99□□□□□ -1.61
CHMP4A-209ENST00000542700 ICOSQ9Y6W8 199 aa4.99□□□□□ -1.61
CHMP4A-209ENST00000542700 TRBV10-1A0A0K0K1A3 114 aa4.98□□□□□ -1.61
CHMP4A-209ENST00000542700 TRBV6-5A0A0K0K1A5 114 aa4.98□□□□□ -1.61
CHMP4A-209ENST00000542700 I3L3M4 83 aa4.98□□□□□ -1.61
CHMP4A-209ENST00000542700 GYPEP15421 78 aa4.98□□□□□ -1.61
CHMP4A-209ENST00000542700 AMTP48728 403 aa4.98□□□□□ -1.61
CHMP4A-209ENST00000542700 CRYBA4P53673 196 aa4.98□□□□□ -1.61
CHMP4A-209ENST00000542700 LAGE3Q14657 143 aa4.98□□□□□ -1.61
CHMP4A-209ENST00000542700 RHOHQ15669 191 aa4.98□□□□□ -1.61
CHMP4A-209ENST00000542700 COA6Q5JTJ3 125 aaKnown RBP4.98□□□□□ -1.61
CHMP4A-209ENST00000542700 LYPD5Q6UWN5 251 aa4.98□□□□□ -1.61
CHMP4A-209ENST00000542700 HIST3H2BBQ8N257 126 aa4.98□□□□□ -1.61
CHMP4A-209ENST00000542700 KIR2DL4Q99706 377 aa4.98□□□□□ -1.61
CHMP4A-209ENST00000542700 AP5S1Q9NUS5 200 aa4.98□□□□□ -1.61
CHMP4A-209ENST00000542700 TRBV7-3A0A075B6L6 115 aa4.97□□□□□ -1.61
CHMP4A-209ENST00000542700 AKR1D1P51857 326 aa4.97□□□□□ -1.61
CHMP4A-209ENST00000542700 ATP6V0E2Q8NHE4 81 aa4.97□□□□□ -1.61
CHMP4A-209ENST00000542700 LOC105371267A0A1B0GV96 52 aa4.96□□□□□ -1.62
CHMP4A-209ENST00000542700 ESDP10768 282 aa4.96□□□□□ -1.62
CHMP4A-209ENST00000542700 G0S2P27469 103 aa4.96□□□□□ -1.62
CHMP4A-209ENST00000542700 LINC00310P59036 64 aa4.96□□□□□ -1.62
CHMP4A-209ENST00000542700 UBE2D3P61077 147 aa4.96□□□□□ -1.62
CHMP4A-209ENST00000542700 UBE2D2P62837 147 aa4.96□□□□□ -1.62
CHMP4A-209ENST00000542700 RPL32P62910 135 aaKnown RBP4.96□□□□□ -1.62
CHMP4A-209ENST00000542700 COTL1Q14019 142 aa4.96□□□□□ -1.62
CHMP4A-209ENST00000542700 ORMDL2Q53FV1 153 aa4.96□□□□□ -1.62
CHMP4A-209ENST00000542700 OR10D4PQ8NGN7 298 aa4.96□□□□□ -1.62
CHMP4A-209ENST00000542700 IGHV1-24A0A0C4DH33 117 aa4.95□□□□□ -1.62
CHMP4A-209ENST00000542700 TRBV27A0A0K0K1C4 114 aa4.95□□□□□ -1.62
CHMP4A-209ENST00000542700 LEPROTL1O95214 131 aa4.95□□□□□ -1.62
CHMP4A-209ENST00000542700 HBDP02042 147 aa4.95□□□□□ -1.62
CHMP4A-209ENST00000542700 MRPL23Q16540 153 aaKnown RBP4.95□□□□□ -1.62
CHMP4A-209ENST00000542700 DAZ4Q86SG3 579 aaKnown RBP4.95□□□□□ -1.62
CHMP4A-209ENST00000542700 DAZ3Q9NR90 486 aaKnown RBP4.95□□□□□ -1.62
CHMP4A-209ENST00000542700 LINC01546A6NGU7 62 aa4.94□□□□□ -1.62
CHMP4A-209ENST00000542700 H0Y8G0 127 aa4.94□□□□□ -1.62
CHMP4A-209ENST00000542700 K7EMI3 77 aa4.94□□□□□ -1.62
CHMP4A-209ENST00000542700 TSHBP01222 138 aa4.94□□□□□ -1.62
CHMP4A-209ENST00000542700 KRTDAPP60985 99 aa4.94□□□□□ -1.62
CHMP4A-209ENST00000542700 TMEM97Q5BJF2 176 aa4.94□□□□□ -1.62
CHMP4A-209ENST00000542700 C2orf66Q6UXQ4 117 aa4.94□□□□□ -1.62
CHMP4A-209ENST00000542700 SCGB3A1Q96QR1 104 aa4.94□□□□□ -1.62
CHMP4A-209ENST00000542700 HIST1H2BLQ99880 126 aa4.94□□□□□ -1.62
CHMP4A-209ENST00000542700 IBA57-AS1B1ANH7 110 aa4.93□□□□□ -1.62
CHMP4A-209ENST00000542700 UBE2L6O14933 153 aa4.93□□□□□ -1.62
CHMP4A-209ENST00000542700 SCGB1D1O95968 90 aa4.93□□□□□ -1.62
CHMP4A-209ENST00000542700 PRSS1P07477 247 aa4.93□□□□□ -1.62
CHMP4A-209ENST00000542700 DGAT2L7PQ6IED9 249 aa4.93□□□□□ -1.62
CHMP4A-209ENST00000542700 NTM-AS1Q6ZSK4 140 aa4.93□□□□□ -1.62
CHMP4A-209ENST00000542700 LINC00173Q6ZV60 143 aa4.93□□□□□ -1.62
CHMP4A-209ENST00000542700 C20orf203Q8NBC4 194 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms