RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 PSPHP1O15172 72 aa5.41□□□□□ -1.54
NPIPB4-215ENST00000542133 SAA1P0DJI8 122 aaPredicted RBP5.41□□□□□ -1.54
NPIPB4-215ENST00000542133 CMC4P56277 68 aaPredicted RBP5.41□□□□□ -1.54
NPIPB4-215ENST00000542133 NPC2P61916 151 aa5.41□□□□□ -1.54
NPIPB4-215ENST00000542133 C11orf72Q8NBR9 251 aa5.41□□□□□ -1.54
NPIPB4-215ENST00000542133 NEXN-AS1Q8NBZ9 246 aa5.41□□□□□ -1.54
NPIPB4-215ENST00000542133 LSM10Q969L4 123 aaKnown RBP5.41□□□□□ -1.54
NPIPB4-215ENST00000542133 FXYD5Q96DB9 178 aa5.41□□□□□ -1.54
NPIPB4-215ENST00000542133 PRO0461Q9UI25 63 aa5.41□□□□□ -1.54
NPIPB4-215ENST00000542133 IGKV1D-13A0A0B4J2D9 117 aa5.4□□□□□ -1.54
NPIPB4-215ENST00000542133 H0YIZ8 118 aa5.4□□□□□ -1.54
NPIPB4-215ENST00000542133 ZNF73O43830 326 aaPredicted RBP5.4□□□□□ -1.54
NPIPB4-215ENST00000542133 IGKV1-13P0DP09 117 aa5.4□□□□□ -1.54
NPIPB4-215ENST00000542133 SNRPGP62308 76 aaKnown RBP5.4□□□□□ -1.54
NPIPB4-215ENST00000542133 PHF5AQ7RTV0 110 aaKnown RBP5.4□□□□□ -1.54
NPIPB4-215ENST00000542133 C6orf201Q7Z4U5 140 aa5.4□□□□□ -1.54
NPIPB4-215ENST00000542133 FAM19A3Q7Z5A8 133 aa5.4□□□□□ -1.54
NPIPB4-215ENST00000542133 LINC00337Q8N6G1 96 aa5.4□□□□□ -1.54
NPIPB4-215ENST00000542133 DCANP1Q8TF63 244 aa5.4□□□□□ -1.54
NPIPB4-215ENST00000542133 GTSF1Q8WW33 167 aa5.4□□□□□ -1.54
NPIPB4-215ENST00000542133 TRBV20OR9-2A0A075B6H5 130 aa5.39□□□□□ -1.55
NPIPB4-215ENST00000542133 IGKV3-7A0A075B6H7 116 aa5.39□□□□□ -1.55
NPIPB4-215ENST00000542133 IGHV3OR16-8A0A075B7F1 116 aa5.39□□□□□ -1.55
NPIPB4-215ENST00000542133 IGKV1-6A0A0C4DH72 117 aa5.39□□□□□ -1.55
NPIPB4-215ENST00000542133 LOC389332A0A1B0GUA5 103 aa5.39□□□□□ -1.55
NPIPB4-215ENST00000542133 A8MUN3 132 aa5.39□□□□□ -1.55
NPIPB4-215ENST00000542133 E7EUB6 86 aa5.39□□□□□ -1.55
NPIPB4-215ENST00000542133 M0R381 172 aa5.39□□□□□ -1.55
NPIPB4-215ENST00000542133 LST1O00453 97 aa5.39□□□□□ -1.55
NPIPB4-215ENST00000542133 LINC00242Q5T6M2 205 aa5.39□□□□□ -1.55
NPIPB4-215ENST00000542133 AMN1Q8IY45 258 aa5.39□□□□□ -1.55
NPIPB4-215ENST00000542133 LRP1Q07954 4544 aaKnown RBP5.39□□□□□ -1.55
NPIPB4-215ENST00000542133 TRBV6-6A0A0A6YYG2 114 aa5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 ATOX1O00244 68 aa5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 NDUFA4O00483 81 aa5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 SMIM13P0DJ93 91 aa5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 FAUP35544 74 aaKnown RBP5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 RPL27AP46776 148 aaKnown RBP5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 DEFB131AP59861 70 aa5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 SH2D6Q7Z4S9 175 aa5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 TOMM5Q8N4H5 51 aa5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 CSNK1G2-AS1Q8NCQ2 148 aa5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 OR8A1Q8NGG7 326 aa5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 FAM213BQ8TBF2 198 aa5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 FAM3DQ96BQ1 224 aa5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 PGLYRP4Q96LB8 373 aa5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 HDHD3Q9BSH5 251 aaPredicted RBP5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 CHAC1Q9BUX1 264 aa5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 GABARAPL3Q9BY60 117 aa5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 GABARAPL1Q9H0R8 117 aa5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 DPH3P1Q9H4G8 78 aa5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 SDF2L1Q9HCN8 221 aa5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 TMEM14BQ9NUH8 114 aa5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 FAT3Q8TDW7 4589 aa5.38□□□□□ -1.55
NPIPB4-215ENST00000542133 IGHV7-4-1A0A0J9YVY3 117 aa5.37□□□□□ -1.55
NPIPB4-215ENST00000542133 LINC00473A8K010 186 aa5.37□□□□□ -1.55
NPIPB4-215ENST00000542133 E9PLD3 99 aa5.37□□□□□ -1.55
NPIPB4-215ENST00000542133 TCL1BO95988 128 aa5.37□□□□□ -1.55
NPIPB4-215ENST00000542133 IGKCP01834 107 aa5.37□□□□□ -1.55
NPIPB4-215ENST00000542133 DEFA4P12838 97 aa5.37□□□□□ -1.55
NPIPB4-215ENST00000542133 RHPN1-AS1Q9BWJ2 59 aa5.37□□□□□ -1.55
NPIPB4-215ENST00000542133 KRTAP4-2Q9BYR5 136 aa5.37□□□□□ -1.55
NPIPB4-215ENST00000542133 PLA2G2DQ9UNK4 145 aa5.37□□□□□ -1.55
NPIPB4-215ENST00000542133 V9GY05 133 aa5.37□□□□□ -1.55
NPIPB4-215ENST00000542133 TRBV6-7A0A0A0MS04 114 aa5.36□□□□□ -1.55
NPIPB4-215ENST00000542133 IGHV3-49A0A0A0MS15 119 aa5.36□□□□□ -1.55
NPIPB4-215ENST00000542133 KRTAP9-7A8MTY7 169 aa5.36□□□□□ -1.55
NPIPB4-215ENST00000542133 LINC00310P59036 64 aa5.36□□□□□ -1.55
NPIPB4-215ENST00000542133 HBBP68871 147 aa5.36□□□□□ -1.55
NPIPB4-215ENST00000542133 TMEM136Q6ZRR5 245 aa5.36□□□□□ -1.55
NPIPB4-215ENST00000542133 Q6ZSN1 163 aa5.36□□□□□ -1.55
NPIPB4-215ENST00000542133 TMEM167AQ8TBQ9 72 aa5.36□□□□□ -1.55
NPIPB4-215ENST00000542133 ZNF414Q96IQ9 312 aa5.36□□□□□ -1.55
NPIPB4-215ENST00000542133 C17orf77Q96MU5 243 aa5.36□□□□□ -1.55
NPIPB4-215ENST00000542133 MGST2Q99735 147 aa5.36□□□□□ -1.55
NPIPB4-215ENST00000542133 CHCHD5Q9BSY4 110 aa5.36□□□□□ -1.55
NPIPB4-215ENST00000542133 XCL2Q9UBD3 114 aa5.36□□□□□ -1.55
NPIPB4-215ENST00000542133 LSM2Q9Y333 95 aaKnown RBP5.36□□□□□ -1.55
NPIPB4-215ENST00000542133 DNAH8Q96JB1 4490 aa5.36□□□□□ -1.55
NPIPB4-215ENST00000542133 TRAV14DV4A0A0A6YYC5 116 aa5.35□□□□□ -1.55
NPIPB4-215ENST00000542133 KRTAP29-1A8MX34 341 aaPredicted RBP5.35□□□□□ -1.55
NPIPB4-215ENST00000542133 COX7A2LO14548 114 aa5.35□□□□□ -1.55
NPIPB4-215ENST00000542133 HLA-DQA1P01909 254 aa5.35□□□□□ -1.55
NPIPB4-215ENST00000542133 SPART-AS1P0CW21 52 aa5.35□□□□□ -1.55
NPIPB4-215ENST00000542133 ATP5EP56381 51 aaPredicted RBP5.35□□□□□ -1.55
NPIPB4-215ENST00000542133 SNRPD3P62318 126 aaKnown RBP5.35□□□□□ -1.55
NPIPB4-215ENST00000542133 KIAA0087Q14695 138 aa5.35□□□□□ -1.55
NPIPB4-215ENST00000542133 C6orf99Q4VX62 202 aa5.35□□□□□ -1.55
NPIPB4-215ENST00000542133 PSMG4Q5JS54 123 aa5.35□□□□□ -1.55
NPIPB4-215ENST00000542133 ZC2HC1BQ5TFG8 222 aa5.35□□□□□ -1.55
NPIPB4-215ENST00000542133 CEND1Q8N111 149 aa5.35□□□□□ -1.55
NPIPB4-215ENST00000542133 OR5C1Q8NGR4 320 aa5.35□□□□□ -1.55
NPIPB4-215ENST00000542133 LINC01600Q96MT4 127 aa5.35□□□□□ -1.55
NPIPB4-215ENST00000542133 DSCR8Q96T75 97 aa5.35□□□□□ -1.55
NPIPB4-215ENST00000542133 F11RQ9Y624 299 aaKnown RBP5.35□□□□□ -1.55
NPIPB4-215ENST00000542133 IGHV3OR16-13A0A075B7E8 117 aa5.34□□□□□ -1.55
NPIPB4-215ENST00000542133 IGHV3-74A0A0B4J1X5 117 aa5.34□□□□□ -1.55
NPIPB4-215ENST00000542133 TRAV2A0A0B4J234 112 aa5.34□□□□□ -1.55
NPIPB4-215ENST00000542133 A0A0J9YXV3 536 aa5.34□□□□□ -1.55
NPIPB4-215ENST00000542133 SMR3BP02814 79 aaPredicted RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms