RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 Q6ZQT7 251 aa3.05□□□□□ -1.92
CIT-211ENST00000541841 Q86TA4 180 aa3.05□□□□□ -1.92
CIT-211ENST00000541841 TTC9CQ8N5M4 171 aa3.05□□□□□ -1.92
CIT-211ENST00000541841 C3orf22Q8N5N4 141 aa3.05□□□□□ -1.92
CIT-211ENST00000541841 OR11H2Q8NH07 326 aa3.05□□□□□ -1.92
CIT-211ENST00000541841 TMEM167AQ8TBQ9 72 aa3.05□□□□□ -1.92
CIT-211ENST00000541841 IFI27L1Q96BM0 104 aa3.05□□□□□ -1.92
CIT-211ENST00000541841 FAM167A-AS1Q96KT0 104 aa3.05□□□□□ -1.92
CIT-211ENST00000541841 PRELID3AQ96N28 172 aa3.05□□□□□ -1.92
CIT-211ENST00000541841 SPANXDQ9BXN6 97 aa3.05□□□□□ -1.92
CIT-211ENST00000541841 TTTY12Q9BZ98 90 aa3.05□□□□□ -1.92
CIT-211ENST00000541841 MRPL16Q9NX20 251 aaKnown RBP3.05□□□□□ -1.92
CIT-211ENST00000541841 TMEM14CQ9P0S9 112 aa3.05□□□□□ -1.92
CIT-211ENST00000541841 TP73-AS1Q9UF72 201 aa3.05□□□□□ -1.92
CIT-211ENST00000541841 ZNF835Q9Y2P0 537 aa3.05□□□□□ -1.92
CIT-211ENST00000541841 TIMM8BQ9Y5J9 83 aaPredicted RBP3.05□□□□□ -1.92
CIT-211ENST00000541841 MYO9AB2RTY4 2548 aa3.05□□□□□ -1.92
CIT-211ENST00000541841 LRRK2Q5S007 2527 aa3.05□□□□□ -1.92
CIT-211ENST00000541841 FLNCQ14315 2725 aa3.04□□□□□ -1.92
CIT-211ENST00000541841 J3QKU1 62 aa3.04□□□□□ -1.92
CIT-211ENST00000541841 DPM2O94777 84 aa3.04□□□□□ -1.92
CIT-211ENST00000541841 IGHV3-53P01767 116 aa3.04□□□□□ -1.92
CIT-211ENST00000541841 IGHV3-7P01780 117 aa3.04□□□□□ -1.92
CIT-211ENST00000541841 SAA1P0DJI8 122 aaPredicted RBP3.04□□□□□ -1.92
CIT-211ENST00000541841 PLNP26678 52 aa3.04□□□□□ -1.92
CIT-211ENST00000541841 CKS2P33552 79 aa3.04□□□□□ -1.92
CIT-211ENST00000541841 ZNF137PP52743 207 aa3.04□□□□□ -1.92
CIT-211ENST00000541841 PDE6HQ13956 83 aa3.04□□□□□ -1.92
CIT-211ENST00000541841 FAM229BQ4G0N7 80 aa3.04□□□□□ -1.92
CIT-211ENST00000541841 SDIM1Q6ZPB5 146 aa3.04□□□□□ -1.92
CIT-211ENST00000541841 FOXI2Q6ZQN5 318 aa3.04□□□□□ -1.92
CIT-211ENST00000541841 C2orf91Q6ZV80 131 aa3.04□□□□□ -1.92
CIT-211ENST00000541841 RAB37Q96AX2 223 aa3.04□□□□□ -1.92
CIT-211ENST00000541841 TTTY13Q9BZ97 58 aa3.04□□□□□ -1.92
CIT-211ENST00000541841 NDUFA4L2Q9NRX3 87 aa3.04□□□□□ -1.92
CIT-211ENST00000541841 KLK5Q9Y337 293 aaPredicted RBP3.04□□□□□ -1.92
CIT-211ENST00000541841 LINC00312Q9Y6C7 94 aa3.04□□□□□ -1.92
CIT-211ENST00000541841 UBR5O95071 2799 aaPredicted RBP3.04□□□□□ -1.92
CIT-211ENST00000541841 MED12LQ86YW9 2145 aa3.04□□□□□ -1.92
CIT-211ENST00000541841 COL6A6A6NMZ7 2263 aa3.03□□□□□ -1.92
CIT-211ENST00000541841 USF3Q68DE3 2245 aa3.03□□□□□ -1.92
CIT-211ENST00000541841 TRBV20-1A0A075B6N2 111 aa3.03□□□□□ -1.92
CIT-211ENST00000541841 TRAV3A0A0B4J244 114 aa3.03□□□□□ -1.92
CIT-211ENST00000541841 K7EMI3 77 aa3.03□□□□□ -1.92
CIT-211ENST00000541841 LY6HO94772 140 aa3.03□□□□□ -1.92
CIT-211ENST00000541841 IGKCP01834 107 aa3.03□□□□□ -1.92
CIT-211ENST00000541841 PYYP10082 97 aa3.03□□□□□ -1.92
CIT-211ENST00000541841 EVI2AP22794 236 aa3.03□□□□□ -1.92
CIT-211ENST00000541841 GLRXP35754 106 aa3.03□□□□□ -1.92
CIT-211ENST00000541841 RPL27AP46776 148 aaKnown RBP3.03□□□□□ -1.92
CIT-211ENST00000541841 KLRD1Q13241 179 aa3.03□□□□□ -1.92
CIT-211ENST00000541841 GDF5OSQ5U4N7 250 aa3.03□□□□□ -1.92
CIT-211ENST00000541841 ZNF826PQ6ZT77 177 aa3.03□□□□□ -1.92
CIT-211ENST00000541841 ZNF833PQ6ZTB9 187 aa3.03□□□□□ -1.92
CIT-211ENST00000541841 MYOZ3Q8TDC0 251 aa3.03□□□□□ -1.92
CIT-211ENST00000541841 ZNF418Q8TF45 676 aaPredicted RBP3.03□□□□□ -1.92
CIT-211ENST00000541841 DIDO1Q9BTC0 2240 aaKnown RBP3.03□□□□□ -1.93
CIT-211ENST00000541841 PI4KAP42356 2102 aa3.02□□□□□ -1.93
CIT-211ENST00000541841 TEP1Q99973 2627 aaKnown RBP3.02□□□□□ -1.93
CIT-211ENST00000541841 ABCA12Q86UK0 2595 aa3.02□□□□□ -1.93
CIT-211ENST00000541841 IGKV2D-24A0A075B6R9 120 aa3.02□□□□□ -1.93
CIT-211ENST00000541841 IGKV1D-17A0A075B6S4 117 aa3.02□□□□□ -1.93
CIT-211ENST00000541841 D6R8Y8 96 aa3.02□□□□□ -1.93
CIT-211ENST00000541841 H3BMG7 143 aa3.02□□□□□ -1.93
CIT-211ENST00000541841 LYZL6O75951 148 aa3.02□□□□□ -1.93
CIT-211ENST00000541841 PPP1R17O96001 155 aa3.02□□□□□ -1.93
CIT-211ENST00000541841 ARMS2P0C7Q2 107 aa3.02□□□□□ -1.93
CIT-211ENST00000541841 FCER1GP30273 86 aa3.02□□□□□ -1.93
CIT-211ENST00000541841 LINC00311Q8N616 119 aa3.02□□□□□ -1.93
CIT-211ENST00000541841 NHP2Q9NX24 153 aaKnown RBP3.02□□□□□ -1.93
CIT-211ENST00000541841 SPANXCQ9NY87 97 aa3.02□□□□□ -1.93
CIT-211ENST00000541841 HILPDAQ9Y5L2 63 aa3.02□□□□□ -1.93
CIT-211ENST00000541841 BOD1L1Q8NFC6 3051 aa3.02□□□□□ -1.93
CIT-211ENST00000541841 CREBBPQ92793 2442 aa3.02□□□□□ -1.93
CIT-211ENST00000541841 ANKRD17O75179 2603 aaKnown RBP3.02□□□□□ -1.93
CIT-211ENST00000541841 AHCTF1Q8WYP5 2266 aa3.02□□□□□ -1.93
CIT-211ENST00000541841 TLN1Q9Y490 2541 aaKnown RBP3.01□□□□□ -1.93
CIT-211ENST00000541841 USP9YO00507 2555 aaPredicted RBP3.01□□□□□ -1.93
CIT-211ENST00000541841 TRAV5A0A0B4J249 113 aa3.01□□□□□ -1.93
CIT-211ENST00000541841 RPL7P18124 248 aaKnown RBP3.01□□□□□ -1.93
CIT-211ENST00000541841 IFI27P40305 119 aaPredicted RBP3.01□□□□□ -1.93
CIT-211ENST00000541841 EBI3Q14213 229 aa3.01□□□□□ -1.93
CIT-211ENST00000541841 ZFAND6Q6FIF0 208 aa3.01□□□□□ -1.93
CIT-211ENST00000541841 EXOC3-AS1Q8N2X6 119 aa3.01□□□□□ -1.93
CIT-211ENST00000541841 CNEP1R1Q8N9A8 125 aa3.01□□□□□ -1.93
CIT-211ENST00000541841 PPDPFLQ8WWR9 84 aa3.01□□□□□ -1.93
CIT-211ENST00000541841 U3KQA8 63 aa3.01□□□□□ -1.93
CIT-211ENST00000541841 RTTNQ86VV8 2226 aa3□□□□□ -1.93
CIT-211ENST00000541841 NBASA2RRP1 2371 aa3□□□□□ -1.93
CIT-211ENST00000541841 TRBV19A0A075B6N1 114 aa3□□□□□ -1.93
CIT-211ENST00000541841 TRBV25-1A0A075B6N4 114 aa3□□□□□ -1.93
CIT-211ENST00000541841 TRAV12-1A0A0B4J245 112 aa3□□□□□ -1.93
CIT-211ENST00000541841 LINC01546A6NGU7 62 aa3□□□□□ -1.93
CIT-211ENST00000541841 A8MWV9 139 aa3□□□□□ -1.93
CIT-211ENST00000541841 H3BRN7 92 aa3□□□□□ -1.93
CIT-211ENST00000541841 NDUFB3O43676 98 aa3□□□□□ -1.93
CIT-211ENST00000541841 SNCGO76070 127 aa3□□□□□ -1.93
CIT-211ENST00000541841 IGHV1-69P01742 117 aa3□□□□□ -1.93
CIT-211ENST00000541841 LGALS1P09382 135 aaKnown RBP3□□□□□ -1.93
CIT-211ENST00000541841 SPINK8P0C7L1 97 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms