RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 DPM2O94777 84 aa6.59□□□□□ -1.35
CHFR-220ENST00000541817 IGKCP01834 107 aa6.59□□□□□ -1.35
CHFR-220ENST00000541817 TMEM97Q5BJF2 176 aa6.59□□□□□ -1.35
CHFR-220ENST00000541817 Q6ZQT7 251 aa6.59□□□□□ -1.35
CHFR-220ENST00000541817 BOD1L2Q8IYS8 172 aa6.59□□□□□ -1.35
CHFR-220ENST00000541817 CHTOPQ9Y3Y2 248 aaKnown RBP6.59□□□□□ -1.35
CHFR-220ENST00000541817 TNXBP22105 4242 aa6.58□□□□□ -1.36
CHFR-220ENST00000541817 TRAV26-2A0A0B4J265 109 aa6.58□□□□□ -1.36
CHFR-220ENST00000541817 A6NDN8 102 aa6.58□□□□□ -1.36
CHFR-220ENST00000541817 CBY3A6NI87 242 aa6.58□□□□□ -1.36
CHFR-220ENST00000541817 LINC01549A6NIU2 74 aa6.58□□□□□ -1.36
CHFR-220ENST00000541817 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.58□□□□□ -1.36
CHFR-220ENST00000541817 MT1HL1P0DM35 61 aa6.58□□□□□ -1.36
CHFR-220ENST00000541817 PTTG1IPP53801 180 aa6.58□□□□□ -1.36
CHFR-220ENST00000541817 SUMO2P61956 95 aaKnown RBP6.58□□□□□ -1.36
CHFR-220ENST00000541817 SEC11AP67812 179 aa6.58□□□□□ -1.36
CHFR-220ENST00000541817 HSD52Q0P140 79 aa6.58□□□□□ -1.36
CHFR-220ENST00000541817 ODF1Q14990 250 aa6.58□□□□□ -1.36
CHFR-220ENST00000541817 C14orf178Q8N769 122 aaPredicted RBP6.58□□□□□ -1.36
CHFR-220ENST00000541817 PLAC8L1A1L4L8 177 aa6.57□□□□□ -1.36
CHFR-220ENST00000541817 NPSP0C0P6 89 aa6.57□□□□□ -1.36
CHFR-220ENST00000541817 RNASE3P12724 160 aaKnown RBP6.57□□□□□ -1.36
CHFR-220ENST00000541817 NMUP48645 174 aa6.57□□□□□ -1.36
CHFR-220ENST00000541817 KIR3DS1Q14943 382 aa6.57□□□□□ -1.36
CHFR-220ENST00000541817 VAMP3Q15836 100 aa6.57□□□□□ -1.36
CHFR-220ENST00000541817 C21orf62-AS1Q17RA5 79 aa6.57□□□□□ -1.36
CHFR-220ENST00000541817 SCGB3A1Q96QR1 104 aa6.57□□□□□ -1.36
CHFR-220ENST00000541817 A0A087WX48 190 aa6.56□□□□□ -1.36
CHFR-220ENST00000541817 TRAV12-1A0A0B4J245 112 aa6.56□□□□□ -1.36
CHFR-220ENST00000541817 TRAV12-3A0A0B4J271 114 aa6.56□□□□□ -1.36
CHFR-220ENST00000541817 A0A0J9YX75 114 aa6.56□□□□□ -1.36
CHFR-220ENST00000541817 H7C1H1 209 aa6.56□□□□□ -1.36
CHFR-220ENST00000541817 NXPH4O95158 308 aa6.56□□□□□ -1.36
CHFR-220ENST00000541817 FGF6P10767 208 aa6.56□□□□□ -1.36
CHFR-220ENST00000541817 UBE2V1Q13404 147 aa6.56□□□□□ -1.36
CHFR-220ENST00000541817 C2orf91Q6ZV80 131 aa6.56□□□□□ -1.36
CHFR-220ENST00000541817 RASL10AQ92737 203 aa6.56□□□□□ -1.36
CHFR-220ENST00000541817 F5H697 171 aa6.55□□□□□ -1.36
CHFR-220ENST00000541817 TAX1BP3O14907 124 aa6.55□□□□□ -1.36
CHFR-220ENST00000541817 PLNP26678 52 aa6.55□□□□□ -1.36
CHFR-220ENST00000541817 RPL32P62910 135 aaKnown RBP6.55□□□□□ -1.36
CHFR-220ENST00000541817 FOXI2Q6ZQN5 318 aa6.55□□□□□ -1.36
CHFR-220ENST00000541817 TOMM6Q96B49 74 aa6.55□□□□□ -1.36
CHFR-220ENST00000541817 HIGD1BQ9P298 99 aa6.55□□□□□ -1.36
CHFR-220ENST00000541817 TP73-AS1Q9UF72 201 aa6.55□□□□□ -1.36
CHFR-220ENST00000541817 TRGV11A0A075B6L2 103 aa6.54□□□□□ -1.36
CHFR-220ENST00000541817 IGHV1OR15-1A0A075B7D0 117 aa6.54□□□□□ -1.36
CHFR-220ENST00000541817 H3BRM9 83 aa6.54□□□□□ -1.36
CHFR-220ENST00000541817 CIDEAO60543 219 aa6.54□□□□□ -1.36
CHFR-220ENST00000541817 HTN1P15515 57 aa6.54□□□□□ -1.36
CHFR-220ENST00000541817 CDKN1BP46527 198 aa6.54□□□□□ -1.36
CHFR-220ENST00000541817 ZC2HC1BQ5TFG8 222 aa6.54□□□□□ -1.36
CHFR-220ENST00000541817 NFE4Q86UQ8 179 aa6.54□□□□□ -1.36
CHFR-220ENST00000541817 RPL39LQ96EH5 51 aaKnown RBP6.54□□□□□ -1.36
CHFR-220ENST00000541817 CLUHP3Q96NS8 147 aa6.54□□□□□ -1.36
CHFR-220ENST00000541817 MRPL35Q9NZE8 188 aaKnown RBP6.54□□□□□ -1.36
CHFR-220ENST00000541817 IGHV3-16A0A0C4DH30 117 aa6.53□□□□□ -1.36
CHFR-220ENST00000541817 F8VRH5 84 aa6.53□□□□□ -1.36
CHFR-220ENST00000541817 VCYO14598 125 aa6.53□□□□□ -1.36
CHFR-220ENST00000541817 C2orf66Q6UXQ4 117 aa6.53□□□□□ -1.36
CHFR-220ENST00000541817 PCP2Q8IVA1 136 aa6.53□□□□□ -1.36
CHFR-220ENST00000541817 OR4C5Q8NGB2 326 aa6.53□□□□□ -1.36
CHFR-220ENST00000541817 C9orf85Q96MD7 179 aa6.53□□□□□ -1.36
CHFR-220ENST00000541817 NOP10Q9NPE3 64 aaKnown RBP6.53□□□□□ -1.36
CHFR-220ENST00000541817 CYSLTR1Q9Y271 337 aa6.53□□□□□ -1.36
CHFR-220ENST00000541817 KIF25-AS1Q9Y6Z4 181 aa6.53□□□□□ -1.36
CHFR-220ENST00000541817 TRAV12-2A0A075B6T6 113 aa6.52□□□□□ -1.37
CHFR-220ENST00000541817 A0A096LPF7 62 aa6.52□□□□□ -1.37
CHFR-220ENST00000541817 LRCOL1A6NCL2 159 aa6.52□□□□□ -1.37
CHFR-220ENST00000541817 SPINK13Q1W4C9 94 aa6.52□□□□□ -1.37
CHFR-220ENST00000541817 LINC01620Q4KN68 170 aa6.52□□□□□ -1.37
CHFR-220ENST00000541817 PAPPA-AS1Q5QFB9 102 aa6.52□□□□□ -1.37
CHFR-220ENST00000541817 SUMO4Q6EEV6 95 aa6.52□□□□□ -1.37
CHFR-220ENST00000541817 Q6ZVH6 145 aa6.52□□□□□ -1.37
CHFR-220ENST00000541817 SCXQ7RTU7 201 aa6.52□□□□□ -1.37
CHFR-220ENST00000541817 ERASQ7Z444 233 aa6.52□□□□□ -1.37
CHFR-220ENST00000541817 KIR2DL4Q99706 377 aa6.52□□□□□ -1.37
CHFR-220ENST00000541817 HHLA3Q9XRX5 114 aa6.52□□□□□ -1.37
CHFR-220ENST00000541817 GAGE12BA1L429 117 aa6.51□□□□□ -1.37
CHFR-220ENST00000541817 CCL25O15444 150 aa6.51□□□□□ -1.37
CHFR-220ENST00000541817 GAGE7O76087 117 aa6.51□□□□□ -1.37
CHFR-220ENST00000541817 GAGE12FP0CL80 117 aa6.51□□□□□ -1.37
CHFR-220ENST00000541817 GAGE12GP0CL81 117 aa6.51□□□□□ -1.37
CHFR-220ENST00000541817 GAGE12IP0CL82 117 aa6.51□□□□□ -1.37
CHFR-220ENST00000541817 SMIM13P0DJ93 91 aa6.51□□□□□ -1.37
CHFR-220ENST00000541817 ZNF56Q15929 161 aa6.51□□□□□ -1.37
CHFR-220ENST00000541817 TAL2Q16559 108 aa6.51□□□□□ -1.37
CHFR-220ENST00000541817 Q6ZSA8 131 aa6.51□□□□□ -1.37
CHFR-220ENST00000541817 NEXN-AS1Q8NBZ9 246 aa6.51□□□□□ -1.37
CHFR-220ENST00000541817 TMEM141Q96I45 108 aa6.51□□□□□ -1.37
CHFR-220ENST00000541817 A0A087WWL8 130 aa6.5□□□□□ -1.37
CHFR-220ENST00000541817 TRBV6-5A0A0K0K1A5 114 aa6.5□□□□□ -1.37
CHFR-220ENST00000541817 C9orf118A6NHY6 69 aa6.5□□□□□ -1.37
CHFR-220ENST00000541817 POLR2KP53803 58 aaKnown RBP6.5□□□□□ -1.37
CHFR-220ENST00000541817 LELP1Q5T871 98 aa6.5□□□□□ -1.37
CHFR-220ENST00000541817 AMMECR1LQ6DCA0 310 aa6.5□□□□□ -1.37
CHFR-220ENST00000541817 AMTNQ6UX39 209 aa6.5□□□□□ -1.37
CHFR-220ENST00000541817 GTF2H5Q6ZYL4 71 aa6.5□□□□□ -1.37
CHFR-220ENST00000541817 Q8N814 137 aa6.5□□□□□ -1.37
CHFR-220ENST00000541817 NTN5Q8WTR8 489 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 151.8 ms