RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 ATP5LO75964 103 aa6.23□□□□□ -1.41
THBS3-210ENST00000541576 TCL1BO95988 128 aa6.23□□□□□ -1.41
THBS3-210ENST00000541576 PPP1R17O96001 155 aa6.23□□□□□ -1.41
THBS3-210ENST00000541576 NPC2P61916 151 aa6.23□□□□□ -1.41
THBS3-210ENST00000541576 TTC32Q5I0X7 151 aa6.23□□□□□ -1.41
THBS3-210ENST00000541576 CFAP126Q5VTH2 177 aa6.23□□□□□ -1.41
THBS3-210ENST00000541576 ANKRD29Q8N6D5 301 aa6.23□□□□□ -1.41
THBS3-210ENST00000541576 CARD19Q96LW7 228 aa6.23□□□□□ -1.41
THBS3-210ENST00000541576 HIGD1BQ9P298 99 aa6.23□□□□□ -1.41
THBS3-210ENST00000541576 X6R8D5 127 aa6.23□□□□□ -1.41
THBS3-210ENST00000541576 IGLV2-18A0A075B6J9 118 aa6.22□□□□□ -1.41
THBS3-210ENST00000541576 IGHV3-73A0A0B4J1V6 119 aa6.22□□□□□ -1.41
THBS3-210ENST00000541576 SMIM9A6NGZ8 99 aa6.22□□□□□ -1.41
THBS3-210ENST00000541576 TSPAN13O95857 204 aa6.22□□□□□ -1.41
THBS3-210ENST00000541576 TMEM170BQ5T4T1 132 aa6.22□□□□□ -1.41
THBS3-210ENST00000541576 Q6ZTI0 123 aa6.22□□□□□ -1.41
THBS3-210ENST00000541576 A8MZ25 164 aa6.21□□□□□ -1.41
THBS3-210ENST00000541576 RHODO00212 210 aa6.21□□□□□ -1.41
THBS3-210ENST00000541576 RS1O15537 224 aa6.21□□□□□ -1.41
THBS3-210ENST00000541576 SNCGO76070 127 aa6.21□□□□□ -1.41
THBS3-210ENST00000541576 SUMO2P61956 95 aaKnown RBP6.21□□□□□ -1.41
THBS3-210ENST00000541576 GAGE2BQ13066 116 aa6.21□□□□□ -1.41
THBS3-210ENST00000541576 GAGE5Q13069 117 aa6.21□□□□□ -1.41
THBS3-210ENST00000541576 GAGE6Q13070 117 aa6.21□□□□□ -1.41
THBS3-210ENST00000541576 GAGE2EQ4V326 116 aa6.21□□□□□ -1.41
THBS3-210ENST00000541576 OVOL2Q9BRP0 275 aa6.21□□□□□ -1.41
THBS3-210ENST00000541576 GAGE2DQ9UEU5 116 aa6.21□□□□□ -1.41
THBS3-210ENST00000541576 TRAV4A0A0B4J268 109 aa6.21□□□□□ -1.42
THBS3-210ENST00000541576 M0QY20 66 aa6.21□□□□□ -1.42
THBS3-210ENST00000541576 Q8N8P6 123 aa6.21□□□□□ -1.42
THBS3-210ENST00000541576 ERG28Q9UKR5 140 aa6.21□□□□□ -1.42
THBS3-210ENST00000541576 SMIM2Q9BVW6 85 aa6.21□□□□□ -1.42
THBS3-210ENST00000541576 TRBV7-3A0A075B6L6 115 aa6.2□□□□□ -1.42
THBS3-210ENST00000541576 A0A087WX48 190 aa6.2□□□□□ -1.42
THBS3-210ENST00000541576 LINC01546A6NGU7 62 aa6.2□□□□□ -1.42
THBS3-210ENST00000541576 H7C1H1 209 aa6.2□□□□□ -1.42
THBS3-210ENST00000541576 Q6ZSN1 163 aa6.2□□□□□ -1.42
THBS3-210ENST00000541576 PPDPFLQ8WWR9 84 aa6.2□□□□□ -1.42
THBS3-210ENST00000541576 TRGV2A0A075B6R0 118 aa6.2□□□□□ -1.42
THBS3-210ENST00000541576 GAGE7O76087 117 aa6.2□□□□□ -1.42
THBS3-210ENST00000541576 GAGE12FP0CL80 117 aa6.2□□□□□ -1.42
THBS3-210ENST00000541576 GAGE12GP0CL81 117 aa6.2□□□□□ -1.42
THBS3-210ENST00000541576 GAGE12IP0CL82 117 aa6.2□□□□□ -1.42
THBS3-210ENST00000541576 NTN5Q8WTR8 489 aaPredicted RBP6.2□□□□□ -1.42
THBS3-210ENST00000541576 F8VRH5 84 aa6.2□□□□□ -1.42
THBS3-210ENST00000541576 EDA2RQ9HAV5 297 aa6.2□□□□□ -1.42
THBS3-210ENST00000541576 Q9UF83 564 aa6.2□□□□□ -1.42
THBS3-210ENST00000541576 PRSS2P07478 247 aa6.19□□□□□ -1.42
THBS3-210ENST00000541576 TRBV6-5A0A0K0K1A5 114 aa6.19□□□□□ -1.42
THBS3-210ENST00000541576 IGHV3-53P01767 116 aa6.19□□□□□ -1.42
THBS3-210ENST00000541576 P0DMU3 169 aa6.19□□□□□ -1.42
THBS3-210ENST00000541576 FAM231AP0DMU4 169 aa6.19□□□□□ -1.42
THBS3-210ENST00000541576 FAM231CP0DMU5 169 aa6.19□□□□□ -1.42
THBS3-210ENST00000541576 TEN1Q86WV5 123 aa6.19□□□□□ -1.42
THBS3-210ENST00000541576 IGHV4-28A0A0C4DH34 117 aa6.18□□□□□ -1.42
THBS3-210ENST00000541576 SDHAF1A6NFY7 115 aa6.18□□□□□ -1.42
THBS3-210ENST00000541576 MIFP14174 115 aa6.18□□□□□ -1.42
THBS3-210ENST00000541576 RPL32P62910 135 aaKnown RBP6.18□□□□□ -1.42
THBS3-210ENST00000541576 PLNP26678 52 aa6.18□□□□□ -1.42
THBS3-210ENST00000541576 POLR2KP53803 58 aaKnown RBP6.18□□□□□ -1.42
THBS3-210ENST00000541576 C2orf66Q6UXQ4 117 aa6.18□□□□□ -1.42
THBS3-210ENST00000541576 ZMAT4Q9H898 229 aa6.18□□□□□ -1.42
THBS3-210ENST00000541576 TEX49A0A1B0GTD5 131 aa6.18□□□□□ -1.42
THBS3-210ENST00000541576 VCYO14598 125 aa6.18□□□□□ -1.42
THBS3-210ENST00000541576 SLC25A20O43772 301 aa6.18□□□□□ -1.42
THBS3-210ENST00000541576 DEFB130BP0DP73 79 aa6.18□□□□□ -1.42
THBS3-210ENST00000541576 DEFB130AP0DP74 79 aa6.18□□□□□ -1.42
THBS3-210ENST00000541576 RPL39P62891 51 aaKnown RBP6.18□□□□□ -1.42
THBS3-210ENST00000541576 DEFB4AO15263 64 aa6.17□□□□□ -1.42
THBS3-210ENST00000541576 PRB2P02812 416 aaPredicted RBP6.17□□□□□ -1.42
THBS3-210ENST00000541576 Q8NAQ8 132 aa6.17□□□□□ -1.42
THBS3-210ENST00000541576 OPRPNQ99935 248 aaPredicted RBP6.17□□□□□ -1.42
THBS3-210ENST00000541576 TRBV27A0A0K0K1C4 114 aa6.17□□□□□ -1.42
THBS3-210ENST00000541576 LYRM9A8MSI8 78 aa6.17□□□□□ -1.42
THBS3-210ENST00000541576 FAM222AQ5U5X8 452 aa6.17□□□□□ -1.42
THBS3-210ENST00000541576 LINC00612Q8N6U2 182 aa6.17□□□□□ -1.42
THBS3-210ENST00000541576 TP53TG1Q9Y2A0 90 aa6.17□□□□□ -1.42
THBS3-210ENST00000541576 TNFRSF18Q9Y5U5 241 aa6.17□□□□□ -1.42
THBS3-210ENST00000541576 GAGE12JA6NER3 117 aa6.16□□□□□ -1.42
THBS3-210ENST00000541576 GAGE4Q13068 117 aa6.16□□□□□ -1.42
THBS3-210ENST00000541576 ORMDL2Q53FV1 153 aa6.16□□□□□ -1.42
THBS3-210ENST00000541576 KPRPQ5T749 579 aaPredicted RBP6.16□□□□□ -1.42
THBS3-210ENST00000541576 C11orf86A6NJI1 115 aa6.16□□□□□ -1.42
THBS3-210ENST00000541576 NEXN-AS1Q8NBZ9 246 aa6.16□□□□□ -1.42
THBS3-210ENST00000541576 K7EQD1 137 aa6.16□□□□□ -1.42
THBS3-210ENST00000541576 NDUFV3P56181 108 aaKnown RBP6.16□□□□□ -1.42
THBS3-210ENST00000541576 C15orf53Q8NAA6 179 aa6.16□□□□□ -1.42
THBS3-210ENST00000541576 BAALCQ8WXS3 180 aa6.16□□□□□ -1.42
THBS3-210ENST00000541576 DNAJC30Q96LL9 226 aa6.16□□□□□ -1.42
THBS3-210ENST00000541576 TRGV4A0A0C4DH28 118 aa6.15□□□□□ -1.42
THBS3-210ENST00000541576 A0A0U1RRA0 63 aa6.15□□□□□ -1.42
THBS3-210ENST00000541576 MEIG1Q5JSS6 88 aa6.15□□□□□ -1.42
THBS3-210ENST00000541576 SLC25A29Q8N8R3 303 aa6.15□□□□□ -1.42
THBS3-210ENST00000541576 CHCHD5Q9BSY4 110 aa6.15□□□□□ -1.42
THBS3-210ENST00000541576 RETNQ9HD89 108 aa6.15□□□□□ -1.42
THBS3-210ENST00000541576 A4D1N5 150 aa6.15□□□□□ -1.43
THBS3-210ENST00000541576 I3L3M4 83 aa6.15□□□□□ -1.43
THBS3-210ENST00000541576 K7EIL1 84 aa6.15□□□□□ -1.43
THBS3-210ENST00000541576 NHLRC4P0CG21 123 aaPredicted RBP6.15□□□□□ -1.43
THBS3-210ENST00000541576 CFC1BP0CG36 223 aa6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms