RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 XCL1P47992 114 aa15.05■□□□□ -0
LEMD3-203ENST00000541171 PRR3P79522 188 aaKnown RBP15.05■□□□□ -0
LEMD3-203ENST00000541171 FOXI1Q12951 378 aa15.05■□□□□ -0
LEMD3-203ENST00000541171 TSKUQ8WUA8 353 aa15.05■□□□□ -0
LEMD3-203ENST00000541171 TNXBP22105 4242 aa15.04■□□□□ -0
LEMD3-203ENST00000541171 RPL23P62829 140 aaKnown RBP15.04■□□□□ -0
LEMD3-203ENST00000541171 LINC00526Q96FQ7 95 aa15.04■□□□□ -0
LEMD3-203ENST00000541171 OR5A1Q8NGJ0 315 aa15.03■□□□□ -0
LEMD3-203ENST00000541171 BTF3L4Q96K17 158 aa15.03■□□□□ -0
LEMD3-203ENST00000541171 ADIRFQ15847 76 aa15.02■□□□□ -0
LEMD3-203ENST00000541171 CLLU1Q5K131 121 aa15.02■□□□□ -0
LEMD3-203ENST00000541171 TMEM101Q96IK0 257 aa15.02■□□□□ -0
LEMD3-203ENST00000541171 LINC01600Q96MT4 127 aa15.02■□□□□ -0
LEMD3-203ENST00000541171 I3L3M4 83 aa15.01□□□□□ -0.01
LEMD3-203ENST00000541171 CCL25O15444 150 aa15.01□□□□□ -0.01
LEMD3-203ENST00000541171 ODF1Q14990 250 aa15.01□□□□□ -0.01
LEMD3-203ENST00000541171 BORCS7Q96B45 105 aa15.01□□□□□ -0.01
LEMD3-203ENST00000541171 V9GYV3 84 aa15.01□□□□□ -0.01
LEMD3-203ENST00000541171 LINC00959A0A1B0GUT2 108 aa15□□□□□ -0.01
LEMD3-203ENST00000541171 HIGD1CA8MV81 97 aa15□□□□□ -0.01
LEMD3-203ENST00000541171 ZNF25P17030 456 aaPredicted RBP15□□□□□ -0.01
LEMD3-203ENST00000541171 LRP2P98164 4655 aa15□□□□□ -0.01
LEMD3-203ENST00000541171 IGHV1-58A0A0C4DH39 117 aa14.98□□□□□ -0.01
LEMD3-203ENST00000541171 GAS8-AS1O95177 125 aa14.98□□□□□ -0.01
LEMD3-203ENST00000541171 TMEM242Q9NWH2 141 aa14.98□□□□□ -0.01
LEMD3-203ENST00000541171 A0A1B0GUT8 65 aa14.97□□□□□ -0.01
LEMD3-203ENST00000541171 CARD19Q96LW7 228 aa14.97□□□□□ -0.01
LEMD3-203ENST00000541171 LINC00474Q9P2X8 69 aa14.97□□□□□ -0.01
LEMD3-203ENST00000541171 TRBV6-5A0A0K0K1A5 114 aa14.96□□□□□ -0.01
LEMD3-203ENST00000541171 TSHBP01222 138 aa14.96□□□□□ -0.01
LEMD3-203ENST00000541171 IFITM2Q01629 132 aa14.96□□□□□ -0.01
LEMD3-203ENST00000541171 SS18Q15532 418 aa14.96□□□□□ -0.01
LEMD3-203ENST00000541171 ST20Q9HBF5 79 aa14.96□□□□□ -0.01
LEMD3-203ENST00000541171 ESDP10768 282 aa14.95□□□□□ -0.02
LEMD3-203ENST00000541171 MRAP2Q96G30 205 aa14.95□□□□□ -0.02
LEMD3-203ENST00000541171 RNF213Q63HN8 5207 aa14.94□□□□□ -0.02
LEMD3-203ENST00000541171 ZNF561-AS1K7EIQ3 104 aa14.94□□□□□ -0.02
LEMD3-203ENST00000541171 NAT8BQ9UHF3 227 aa14.94□□□□□ -0.02
LEMD3-203ENST00000541171 PKIGQ9Y2B9 76 aa14.94□□□□□ -0.02
LEMD3-203ENST00000541171 A0A0J9YXV3 536 aa14.93□□□□□ -0.02
LEMD3-203ENST00000541171 SYCNQ0VAF6 134 aa14.93□□□□□ -0.02
LEMD3-203ENST00000541171 SPINK6Q6UWN8 80 aa14.93□□□□□ -0.02
LEMD3-203ENST00000541171 NUP35Q8NFH5 326 aa14.93□□□□□ -0.02
LEMD3-203ENST00000541171 SMIM27A0A1W2PRY6 76 aa14.92□□□□□ -0.02
LEMD3-203ENST00000541171 TMEM191AQ9H0A3 160 aa14.92□□□□□ -0.02
LEMD3-203ENST00000541171 CDC42SE2Q9NRR3 84 aa14.92□□□□□ -0.02
LEMD3-203ENST00000541171 PNRC1Q12796 327 aaPredicted RBP14.91□□□□□ -0.02
LEMD3-203ENST00000541171 RIGQ13278 110 aa14.91□□□□□ -0.02
LEMD3-203ENST00000541171 REG3GQ6UW15 175 aa14.91□□□□□ -0.02
LEMD3-203ENST00000541171 CD164L2Q6UWJ8 174 aa14.91□□□□□ -0.02
LEMD3-203ENST00000541171 Q6ZRP5 223 aa14.9□□□□□ -0.02
LEMD3-203ENST00000541171 ZNF664Q8N3J9 261 aa14.9□□□□□ -0.02
LEMD3-203ENST00000541171 POLR2KP53803 58 aaKnown RBP14.89□□□□□ -0.03
LEMD3-203ENST00000541171 GAGE2BQ13066 116 aa14.89□□□□□ -0.03
LEMD3-203ENST00000541171 UQCC3Q6UW78 93 aa14.89□□□□□ -0.03
LEMD3-203ENST00000541171 MRPL52Q86TS9 123 aaKnown RBP14.89□□□□□ -0.03
LEMD3-203ENST00000541171 C7orf77A4D0Y5 90 aa14.88□□□□□ -0.03
LEMD3-203ENST00000541171 CAMPP49913 170 aa14.88□□□□□ -0.03
LEMD3-203ENST00000541171 KRTAP10-8P60410 259 aa14.88□□□□□ -0.03
LEMD3-203ENST00000541171 PPP1R2P9O14990 202 aa14.87□□□□□ -0.03
LEMD3-203ENST00000541171 RAB4AP20338 218 aa14.87□□□□□ -0.03
LEMD3-203ENST00000541171 SRSF9Q13242 221 aaKnown RBP eCLIP14.87□□□□□ -0.03
LEMD3-203ENST00000541171 IGLV4-69A0A075B6H9 119 aa14.86□□□□□ -0.03
LEMD3-203ENST00000541171 TRBV27A0A0K0K1C4 114 aa14.86□□□□□ -0.03
LEMD3-203ENST00000541171 A0A1B0GW15 77 aa14.86□□□□□ -0.03
LEMD3-203ENST00000541171 MALP21145 153 aa14.86□□□□□ -0.03
LEMD3-203ENST00000541171 PTTG1IPP53801 180 aa14.86□□□□□ -0.03
LEMD3-203ENST00000541171 AMN1Q8IY45 258 aa14.86□□□□□ -0.03
LEMD3-203ENST00000541171 LOC107984640A0A0U1RRK4 108 aa14.85□□□□□ -0.03
LEMD3-203ENST00000541171 SMKR1H3BMG3 65 aa14.85□□□□□ -0.03
LEMD3-203ENST00000541171 FCER1GP30273 86 aa14.84□□□□□ -0.03
LEMD3-203ENST00000541171 RNASE13Q5GAN3 156 aaKnown RBP14.84□□□□□ -0.03
LEMD3-203ENST00000541171 COX7A2LO14548 114 aa14.83□□□□□ -0.04
LEMD3-203ENST00000541171 A0A1W2PNN7 141 aa14.82□□□□□ -0.04
LEMD3-203ENST00000541171 C1orf196B1AJZ1 125 aa14.82□□□□□ -0.04
LEMD3-203ENST00000541171 VCYO14598 125 aa14.82□□□□□ -0.04
LEMD3-203ENST00000541171 CAMK2N2Q96S95 79 aa14.82□□□□□ -0.04
LEMD3-203ENST00000541171 S100A8P05109 93 aa14.81□□□□□ -0.04
LEMD3-203ENST00000541171 ANAPC16Q96DE5 110 aa14.81□□□□□ -0.04
LEMD3-203ENST00000541171 TRAV13-1A0A0B4J241 112 aa14.8□□□□□ -0.04
LEMD3-203ENST00000541171 MT-ND4LP03901 98 aa14.8□□□□□ -0.04
LEMD3-203ENST00000541171 A0A1B0GXF2 115 aa14.79□□□□□ -0.04
LEMD3-203ENST00000541171 TMEM218A2RU14 115 aa14.79□□□□□ -0.04
LEMD3-203ENST00000541171 PPP1R17O96001 155 aa14.79□□□□□ -0.04
LEMD3-203ENST00000541171 HBBP68871 147 aa14.79□□□□□ -0.04
LEMD3-203ENST00000541171 ATP5L2Q7Z4Y8 100 aa14.79□□□□□ -0.04
LEMD3-203ENST00000541171 C5orf38Q86SI9 138 aa14.79□□□□□ -0.04
LEMD3-203ENST00000541171 UBE2D4Q9Y2X8 147 aa14.79□□□□□ -0.04
LEMD3-203ENST00000541171 ADCYAP1P18509 176 aa14.78□□□□□ -0.04
LEMD3-203ENST00000541171 FAM104BQ5XKR9 115 aa14.78□□□□□ -0.04
LEMD3-203ENST00000541171 APOMO95445 188 aa14.77□□□□□ -0.05
LEMD3-203ENST00000541171 SUMO2P61956 95 aaKnown RBP14.77□□□□□ -0.05
LEMD3-203ENST00000541171 RPL18AQ02543 176 aaKnown RBP14.77□□□□□ -0.05
LEMD3-203ENST00000541171 SMAGPQ0VAQ4 97 aa14.77□□□□□ -0.05
LEMD3-203ENST00000541171 C9orf116Q5BN46 136 aaPredicted RBP14.77□□□□□ -0.05
LEMD3-203ENST00000541171 KIR2DL4Q99706 377 aa14.77□□□□□ -0.05
LEMD3-203ENST00000541171 CSDC2Q9Y534 153 aaKnown RBP14.77□□□□□ -0.05
LEMD3-203ENST00000541171 MRPL54Q6P161 138 aaKnown RBP14.76□□□□□ -0.05
LEMD3-203ENST00000541171 COMMD7Q86VX2 200 aa14.76□□□□□ -0.05
LEMD3-203ENST00000541171 NRACQ8N912 160 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms