RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 C6orf99Q4VX62 202 aa11.1□□□□□ -0.63
SMARCA4-207ENST00000541122 COX8CQ7Z4L0 72 aa11.1□□□□□ -0.63
SMARCA4-207ENST00000541122 LINC00269Q8N2A0 174 aa11.09□□□□□ -0.63
SMARCA4-207ENST00000541122 Q8N6K4 173 aa11.09□□□□□ -0.63
SMARCA4-207ENST00000541122 C2orf16Q68DN1 1984 aa11.09□□□□□ -0.63
SMARCA4-207ENST00000541122 TRBV6-8A0A0A6YYG3 113 aa11.09□□□□□ -0.63
SMARCA4-207ENST00000541122 SERP1Q9Y6X1 66 aa11.09□□□□□ -0.63
SMARCA4-207ENST00000541122 PRR9Q5T870 116 aa11.09□□□□□ -0.63
SMARCA4-207ENST00000541122 MUC7Q8TAX7 377 aa11.08□□□□□ -0.64
SMARCA4-207ENST00000541122 SCXQ7RTU7 201 aa11.08□□□□□ -0.64
SMARCA4-207ENST00000541122 PSMG3-AS1Q96PY0 264 aa11.08□□□□□ -0.64
SMARCA4-207ENST00000541122 WISP2O76076 250 aa11.08□□□□□ -0.64
SMARCA4-207ENST00000541122 CRYGDP07320 174 aa11.08□□□□□ -0.64
SMARCA4-207ENST00000541122 ESM1Q9NQ30 184 aa11.08□□□□□ -0.64
SMARCA4-207ENST00000541122 KIAA1549Q9HCM3 1950 aa11.07□□□□□ -0.64
SMARCA4-207ENST00000541122 SMIM11BQ8TCY0 68 aa11.07□□□□□ -0.64
SMARCA4-207ENST00000541122 H0Y9J4 135 aa11.07□□□□□ -0.64
SMARCA4-207ENST00000541122 LYRM9A8MSI8 78 aa11.07□□□□□ -0.64
SMARCA4-207ENST00000541122 HCFC1P51610 2035 aa11.07□□□□□ -0.64
SMARCA4-207ENST00000541122 TRAV7A0A075B6U4 112 aa11.07□□□□□ -0.64
SMARCA4-207ENST00000541122 C1orf195Q5TG92 126 aa11.07□□□□□ -0.64
SMARCA4-207ENST00000541122 A8MZ25 164 aa11.06□□□□□ -0.64
SMARCA4-207ENST00000541122 A0A096LNJ9 63 aa11.06□□□□□ -0.64
SMARCA4-207ENST00000541122 DEFB114Q30KQ6 69 aa11.06□□□□□ -0.64
SMARCA4-207ENST00000541122 CCKP06307 115 aa11.05□□□□□ -0.64
SMARCA4-207ENST00000541122 IGLV4-69A0A075B6H9 119 aa11.05□□□□□ -0.64
SMARCA4-207ENST00000541122 SNURFQ9Y675 71 aa11.05□□□□□ -0.64
SMARCA4-207ENST00000541122 DEFB135Q30KP9 77 aa11.04□□□□□ -0.64
SMARCA4-207ENST00000541122 WFDC11Q8NEX6 87 aa11.04□□□□□ -0.64
SMARCA4-207ENST00000541122 COX17Q14061 63 aa11.04□□□□□ -0.64
SMARCA4-207ENST00000541122 POM121L12Q8N7R1 296 aa11.04□□□□□ -0.64
SMARCA4-207ENST00000541122 B9D2Q9BPU9 175 aa11.03□□□□□ -0.64
SMARCA4-207ENST00000541122 PROK1P58294 105 aa11.03□□□□□ -0.64
SMARCA4-207ENST00000541122 SEC61GP60059 68 aa11.03□□□□□ -0.64
SMARCA4-207ENST00000541122 MRGPRG-AS1Q2M3A8 158 aa11.03□□□□□ -0.64
SMARCA4-207ENST00000541122 PLXNB1O43157 2135 aa11.02□□□□□ -0.64
SMARCA4-207ENST00000541122 Q8NA96 180 aa11.02□□□□□ -0.64
SMARCA4-207ENST00000541122 RPL28P46779 137 aaKnown RBP11.02□□□□□ -0.65
SMARCA4-207ENST00000541122 Q6ZQY7 126 aa11.02□□□□□ -0.65
SMARCA4-207ENST00000541122 MIFP14174 115 aa11.01□□□□□ -0.65
SMARCA4-207ENST00000541122 HRCT1Q6UXD1 115 aa11.01□□□□□ -0.65
SMARCA4-207ENST00000541122 CD164L2Q6UWJ8 174 aa11.01□□□□□ -0.65
SMARCA4-207ENST00000541122 MUC22E2RYF6 1773 aaPredicted RBP11.01□□□□□ -0.65
SMARCA4-207ENST00000541122 CRIP2P52943 208 aaPredicted RBP11.01□□□□□ -0.65
SMARCA4-207ENST00000541122 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.01□□□□□ -0.65
SMARCA4-207ENST00000541122 F8W735 103 aaPredicted RBP11.01□□□□□ -0.65
SMARCA4-207ENST00000541122 IGKV4-1P06312 121 aa11□□□□□ -0.65
SMARCA4-207ENST00000541122 C22orf34Q6ZV56 151 aa11□□□□□ -0.65
SMARCA4-207ENST00000541122 IGLV2-18A0A075B6J9 118 aa10.99□□□□□ -0.65
SMARCA4-207ENST00000541122 Q6YL49 198 aa10.98□□□□□ -0.65
SMARCA4-207ENST00000541122 CDIP1Q9H305 208 aa10.98□□□□□ -0.65
SMARCA4-207ENST00000541122 Q8IZM0 81 aa10.98□□□□□ -0.65
SMARCA4-207ENST00000541122 ANKHD1Q8IWZ3 2542 aaKnown RBP10.98□□□□□ -0.65
SMARCA4-207ENST00000541122 TSPEAR-AS2P59090 65 aa10.98□□□□□ -0.65
SMARCA4-207ENST00000541122 PRO3102Q9H379 93 aa10.98□□□□□ -0.65
SMARCA4-207ENST00000541122 DHRS4-AS1Q9P1J3 65 aa10.98□□□□□ -0.65
SMARCA4-207ENST00000541122 TRBV7-7A0A0K0K1E9 115 aa10.97□□□□□ -0.65
SMARCA4-207ENST00000541122 M0R378 163 aa10.97□□□□□ -0.65
SMARCA4-207ENST00000541122 FAM19A5Q7Z5A7 132 aaPredicted RBP10.97□□□□□ -0.65
SMARCA4-207ENST00000541122 PCDH15Q96QU1 1955 aa10.97□□□□□ -0.65
SMARCA4-207ENST00000541122 C14orf177Q52M58 125 aa10.97□□□□□ -0.65
SMARCA4-207ENST00000541122 PRORYQ9H606 182 aa10.97□□□□□ -0.65
SMARCA4-207ENST00000541122 CDC42SE2Q9NRR3 84 aa10.97□□□□□ -0.65
SMARCA4-207ENST00000541122 LINC00959A0A1B0GUT2 108 aa10.97□□□□□ -0.65
SMARCA4-207ENST00000541122 NTM-AS1Q6ZSK4 140 aa10.97□□□□□ -0.65
SMARCA4-207ENST00000541122 PRR15LQ9BU68 103 aa10.97□□□□□ -0.65
SMARCA4-207ENST00000541122 DEFB4AO15263 64 aa10.96□□□□□ -0.65
SMARCA4-207ENST00000541122 DCANP1Q8TF63 244 aa10.96□□□□□ -0.66
SMARCA4-207ENST00000541122 LINC00242Q5T6M2 205 aa10.96□□□□□ -0.66
SMARCA4-207ENST00000541122 C11orf71Q6IPW1 123 aa10.96□□□□□ -0.66
SMARCA4-207ENST00000541122 C1orf158Q8N1D5 194 aa10.95□□□□□ -0.66
SMARCA4-207ENST00000541122 EML5Q05BV3 1969 aa10.95□□□□□ -0.66
SMARCA4-207ENST00000541122 AMELXQ99217 191 aa10.94□□□□□ -0.66
SMARCA4-207ENST00000541122 XAGE1AQ9HD64 81 aa10.94□□□□□ -0.66
SMARCA4-207ENST00000541122 C10orf142B7Z368 130 aa10.94□□□□□ -0.66
SMARCA4-207ENST00000541122 SMIM1B2RUZ4 78 aa10.94□□□□□ -0.66
SMARCA4-207ENST00000541122 C3orf84H3BNL1 204 aa10.94□□□□□ -0.66
SMARCA4-207ENST00000541122 HIGD2AQ9BW72 106 aa10.94□□□□□ -0.66
SMARCA4-207ENST00000541122 TANC2Q9HCD6 1990 aa10.94□□□□□ -0.66
SMARCA4-207ENST00000541122 LINC01546A6NGU7 62 aa10.93□□□□□ -0.66
SMARCA4-207ENST00000541122 IGLV1-40P01703 118 aa10.93□□□□□ -0.66
SMARCA4-207ENST00000541122 DNAJC9-AS1A6NH13 148 aa10.93□□□□□ -0.66
SMARCA4-207ENST00000541122 A6NED7 52 aa10.93□□□□□ -0.66
SMARCA4-207ENST00000541122 CSDC2Q9Y534 153 aaKnown RBP10.93□□□□□ -0.66
SMARCA4-207ENST00000541122 NRGNQ92686 78 aa10.92□□□□□ -0.66
SMARCA4-207ENST00000541122 Q8N814 137 aa10.92□□□□□ -0.66
SMARCA4-207ENST00000541122 ZNF73O43830 326 aaPredicted RBP10.92□□□□□ -0.66
SMARCA4-207ENST00000541122 SYCNQ0VAF6 134 aa10.92□□□□□ -0.66
SMARCA4-207ENST00000541122 KLK5Q9Y337 293 aaPredicted RBP10.92□□□□□ -0.66
SMARCA4-207ENST00000541122 J3QKU1 62 aa10.91□□□□□ -0.66
SMARCA4-207ENST00000541122 WFDC10BQ8IUB3 73 aa10.91□□□□□ -0.66
SMARCA4-207ENST00000541122 FAM19A1Q7Z5A9 133 aa10.91□□□□□ -0.66
SMARCA4-207ENST00000541122 A0A087WVE0 104 aa10.9□□□□□ -0.66
SMARCA4-207ENST00000541122 CHCHD7Q9BUK0 85 aa10.9□□□□□ -0.67
SMARCA4-207ENST00000541122 KIR2DL5BQ8NHK3 375 aa10.89□□□□□ -0.67
SMARCA4-207ENST00000541122 ADAMTSL4-AS1Q5T5F5 129 aa10.89□□□□□ -0.67
SMARCA4-207ENST00000541122 LOC107984640A0A0U1RRK4 108 aa10.88□□□□□ -0.67
SMARCA4-207ENST00000541122 PRYO14603 147 aa10.87□□□□□ -0.67
SMARCA4-207ENST00000541122 A0A087WYN8 130 aa10.86□□□□□ -0.67
SMARCA4-207ENST00000541122 CASC2Q6XLA1 102 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms