RNA–Protein interactions for RNA: ENST00000540828.6

PTMS-205, Transcript of parathymosin, humanhuman

TSL 1 (best)

Gene PTMS, Length 644 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMS-205ENST00000540828 LINC00862A6NCI5 91 aa13.56□□□□□ -0.24
PTMS-205ENST00000540828 DMBT1Q9UGM3 2413 aaPredicted RBP13.55□□□□□ -0.24
PTMS-205ENST00000540828 C7orf77A4D0Y5 90 aa13.55□□□□□ -0.24
PTMS-205ENST00000540828 CDC42SE2Q9NRR3 84 aa13.55□□□□□ -0.24
PTMS-205ENST00000540828 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.55□□□□□ -0.24
PTMS-205ENST00000540828 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.54□□□□□ -0.24
PTMS-205ENST00000540828 LINC00959A0A1B0GUT2 108 aa13.54□□□□□ -0.24
PTMS-205ENST00000540828 PPP1R2P9O14990 202 aa13.54□□□□□ -0.24
PTMS-205ENST00000540828 FOXI1Q12951 378 aa13.54□□□□□ -0.24
PTMS-205ENST00000540828 TRBV24-1A0A075B6N3 115 aa13.53□□□□□ -0.24
PTMS-205ENST00000540828 A0A1B0GXF2 115 aa13.53□□□□□ -0.24
PTMS-205ENST00000540828 PANO1I0J062 215 aa13.53□□□□□ -0.24
PTMS-205ENST00000540828 FCER1GP30273 86 aa13.53□□□□□ -0.24
PTMS-205ENST00000540828 KRTAP10-4P60372 401 aaPredicted RBP13.53□□□□□ -0.24
PTMS-205ENST00000540828 C20orf78Q9BR46 151 aa13.53□□□□□ -0.24
PTMS-205ENST00000540828 HERC1Q15751 4861 aa13.53□□□□□ -0.24
PTMS-205ENST00000540828 IGHV3-64A0A075B6Q5 118 aa13.52□□□□□ -0.25
PTMS-205ENST00000540828 S100A8P05109 93 aa13.52□□□□□ -0.25
PTMS-205ENST00000540828 CKS2P33552 79 aa13.52□□□□□ -0.25
PTMS-205ENST00000540828 HBBP68871 147 aa13.52□□□□□ -0.25
PTMS-205ENST00000540828 MRPL54Q6P161 138 aaKnown RBP13.52□□□□□ -0.25
PTMS-205ENST00000540828 ZNF664Q8N3J9 261 aa13.52□□□□□ -0.25
PTMS-205ENST00000540828 KIR2DL4Q99706 377 aa13.52□□□□□ -0.25
PTMS-205ENST00000540828 RAB14P61106 215 aa13.51□□□□□ -0.25
PTMS-205ENST00000540828 RPL32P62910 135 aaKnown RBP13.51□□□□□ -0.25
PTMS-205ENST00000540828 CIRBPQ14011 172 aaKnown RBP13.51□□□□□ -0.25
PTMS-205ENST00000540828 CSDC2Q9Y534 153 aaKnown RBP13.51□□□□□ -0.25
PTMS-205ENST00000540828 F8W036 122 aa13.5□□□□□ -0.25
PTMS-205ENST00000540828 CCL25O15444 150 aa13.5□□□□□ -0.25
PTMS-205ENST00000540828 XCL1P47992 114 aa13.5□□□□□ -0.25
PTMS-205ENST00000540828 SS18Q15532 418 aa13.5□□□□□ -0.25
PTMS-205ENST00000540828 HIGD2BQ4VC39 106 aa13.5□□□□□ -0.25
PTMS-205ENST00000540828 GVQW2A0A096LPI5 108 aaPredicted RBP13.49□□□□□ -0.25
PTMS-205ENST00000540828 TNFRSF6BO95407 300 aa13.49□□□□□ -0.25
PTMS-205ENST00000540828 SMAGPQ0VAQ4 97 aa13.49□□□□□ -0.25
PTMS-205ENST00000540828 UBE2D4Q9Y2X8 147 aa13.48□□□□□ -0.25
PTMS-205ENST00000540828 D6R8Y8 96 aa13.47□□□□□ -0.25
PTMS-205ENST00000540828 CD164L2Q6UWJ8 174 aa13.47□□□□□ -0.25
PTMS-205ENST00000540828 PPBPP02775 128 aa13.46□□□□□ -0.25
PTMS-205ENST00000540828 PNRC1Q12796 327 aaPredicted RBP13.46□□□□□ -0.25
PTMS-205ENST00000540828 ATP5L2Q7Z4Y8 100 aa13.46□□□□□ -0.25
PTMS-205ENST00000540828 TIMM21Q9BVV7 248 aa13.46□□□□□ -0.25
PTMS-205ENST00000540828 IGHV1-58A0A0C4DH39 117 aa13.45□□□□□ -0.26
PTMS-205ENST00000540828 PHOX2AO14813 284 aa13.45□□□□□ -0.26
PTMS-205ENST00000540828 TCAPO15273 167 aa13.45□□□□□ -0.26
PTMS-205ENST00000540828 TMEM18Q96B42 140 aa13.45□□□□□ -0.26
PTMS-205ENST00000540828 SMIM2Q9BVW6 85 aa13.45□□□□□ -0.26
PTMS-205ENST00000540828 NPYP01303 97 aa13.44□□□□□ -0.26
PTMS-205ENST00000540828 CLLU1Q5K131 121 aa13.44□□□□□ -0.26
PTMS-205ENST00000540828 C1orf196B1AJZ1 125 aa13.43□□□□□ -0.26
PTMS-205ENST00000540828 MT-ND4LP03901 98 aa13.43□□□□□ -0.26
PTMS-205ENST00000540828 CHTF8P0CG12 524 aa13.43□□□□□ -0.26
PTMS-205ENST00000540828 RPL37AP61513 92 aaKnown RBP13.43□□□□□ -0.26
PTMS-205ENST00000540828 SPACA4Q8TDM5 124 aa13.43□□□□□ -0.26
PTMS-205ENST00000540828 ANAPC16Q96DE5 110 aa13.43□□□□□ -0.26
PTMS-205ENST00000540828 DPH3Q96FX2 82 aa13.43□□□□□ -0.26
PTMS-205ENST00000540828 KRTAP29-1A8MX34 341 aaPredicted RBP13.42□□□□□ -0.26
PTMS-205ENST00000540828 COX6A2Q02221 97 aa13.42□□□□□ -0.26
PTMS-205ENST00000540828 TMEM136Q6ZRR5 245 aa13.42□□□□□ -0.26
PTMS-205ENST00000540828 A0A087WYN8 130 aa13.41□□□□□ -0.26
PTMS-205ENST00000540828 RNASE13Q5GAN3 156 aaKnown RBP13.41□□□□□ -0.26
PTMS-205ENST00000540828 ORMDL3Q8N138 153 aa13.41□□□□□ -0.26
PTMS-205ENST00000540828 PRSS3P2Q8NHM4 247 aa13.41□□□□□ -0.26
PTMS-205ENST00000540828 Q6ZUT4 128 aa13.4□□□□□ -0.26
PTMS-205ENST00000540828 TRAV13-1A0A0B4J241 112 aa13.39□□□□□ -0.27
PTMS-205ENST00000540828 J3QL48 77 aa13.39□□□□□ -0.27
PTMS-205ENST00000540828 RPL39P62891 51 aaKnown RBP13.39□□□□□ -0.27
PTMS-205ENST00000540828 FAM104AQ969W3 186 aa13.39□□□□□ -0.27
PTMS-205ENST00000540828 LINC00526Q96FQ7 95 aa13.39□□□□□ -0.27
PTMS-205ENST00000540828 PRELID3AQ96N28 172 aa13.39□□□□□ -0.27
PTMS-205ENST00000540828 PLAC8Q9NZF1 115 aa13.39□□□□□ -0.27
PTMS-205ENST00000540828 PRSS47A8MTI9 375 aa13.37□□□□□ -0.27
PTMS-205ENST00000540828 COX7A2LO14548 114 aa13.37□□□□□ -0.27
PTMS-205ENST00000540828 IFITM2Q01629 132 aa13.37□□□□□ -0.27
PTMS-205ENST00000540828 SPANXA1Q9NS26 97 aa13.37□□□□□ -0.27
PTMS-205ENST00000540828 ZNF561-AS1K7EIQ3 104 aa13.36□□□□□ -0.27
PTMS-205ENST00000540828 MRPS36P82909 103 aaKnown RBP13.36□□□□□ -0.27
PTMS-205ENST00000540828 MALP21145 153 aa13.35□□□□□ -0.27
PTMS-205ENST00000540828 CARD19Q96LW7 228 aa13.35□□□□□ -0.27
PTMS-205ENST00000540828 LAMTOR2Q9Y2Q5 125 aa13.35□□□□□ -0.27
PTMS-205ENST00000540828 IGKV2-24A0A0C4DH68 120 aa13.34□□□□□ -0.27
PTMS-205ENST00000540828 RAB5AP20339 215 aa13.34□□□□□ -0.27
PTMS-205ENST00000540828 SYCNQ0VAF6 134 aa13.34□□□□□ -0.27
PTMS-205ENST00000540828 MAJINQ3KP22 176 aa13.34□□□□□ -0.27
PTMS-205ENST00000540828 OPRPNQ99935 248 aaPredicted RBP13.34□□□□□ -0.27
PTMS-205ENST00000540828 LRP1Q07954 4544 aaKnown RBP13.33□□□□□ -0.27
PTMS-205ENST00000540828 A0A096LNI7 61 aa13.33□□□□□ -0.28
PTMS-205ENST00000540828 HNRNPA3P51991 378 aaKnown RBP13.33□□□□□ -0.28
PTMS-205ENST00000540828 UQCC3Q6UW78 93 aa13.33□□□□□ -0.28
PTMS-205ENST00000540828 C5orf38Q86SI9 138 aa13.33□□□□□ -0.28
PTMS-205ENST00000540828 PKIGQ9Y2B9 76 aa13.33□□□□□ -0.28
PTMS-205ENST00000540828 PKHD1L1Q86WI1 4243 aa13.32□□□□□ -0.28
PTMS-205ENST00000540828 IGLV4-69A0A075B6H9 119 aa13.32□□□□□ -0.28
PTMS-205ENST00000540828 OXTP01178 125 aa13.32□□□□□ -0.28
PTMS-205ENST00000540828 IMMP2LQ96T52 175 aa13.32□□□□□ -0.28
PTMS-205ENST00000540828 TMEM218A2RU14 115 aa13.31□□□□□ -0.28
PTMS-205ENST00000540828 LINC00474Q9P2X8 69 aa13.31□□□□□ -0.28
PTMS-205ENST00000540828 PYGO1Q9Y3Y4 419 aa13.31□□□□□ -0.28
PTMS-205ENST00000540828 LOC389332A0A1B0GUA5 103 aa13.3□□□□□ -0.28
PTMS-205ENST00000540828 APOMO95445 188 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms