RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-204ENST00000540803 C15orf56Q8N910 161 aa12.34□□□□□ -0.43
RAB35-204ENST00000540803 PPP1R2P9O14990 202 aa12.33□□□□□ -0.44
RAB35-204ENST00000540803 TRBV24-1A0A075B6N3 115 aa12.32□□□□□ -0.44
RAB35-204ENST00000540803 S100A8P05109 93 aa12.32□□□□□ -0.44
RAB35-204ENST00000540803 FCER1GP30273 86 aa12.32□□□□□ -0.44
RAB35-204ENST00000540803 CKS2P33552 79 aa12.32□□□□□ -0.44
RAB35-204ENST00000540803 CLLU1Q5K131 121 aa12.32□□□□□ -0.44
RAB35-204ENST00000540803 CDC42SE2Q9NRR3 84 aa12.32□□□□□ -0.44
RAB35-204ENST00000540803 FLG2Q5D862 2391 aaPredicted RBP12.32□□□□□ -0.44
RAB35-204ENST00000540803 LINC00959A0A1B0GUT2 108 aa12.31□□□□□ -0.44
RAB35-204ENST00000540803 F8W036 122 aa12.31□□□□□ -0.44
RAB35-204ENST00000540803 PNRC1Q12796 327 aaPredicted RBP12.31□□□□□ -0.44
RAB35-204ENST00000540803 FOXI1Q12951 378 aa12.31□□□□□ -0.44
RAB35-204ENST00000540803 SDIM1Q6ZPB5 146 aa12.31□□□□□ -0.44
RAB35-204ENST00000540803 KIR2DL4Q99706 377 aa12.31□□□□□ -0.44
RAB35-204ENST00000540803 C20orf78Q9BR46 151 aa12.31□□□□□ -0.44
RAB35-204ENST00000540803 AP5S1Q9NUS5 200 aa12.31□□□□□ -0.44
RAB35-204ENST00000540803 D6R8Y8 96 aa12.3□□□□□ -0.44
RAB35-204ENST00000540803 TNFRSF6BO95407 300 aa12.3□□□□□ -0.44
RAB35-204ENST00000540803 PLA2G1BP04054 148 aaKnown RBP12.3□□□□□ -0.44
RAB35-204ENST00000540803 RPL32P62910 135 aaKnown RBP12.3□□□□□ -0.44
RAB35-204ENST00000540803 CFAP161Q6P656 301 aa12.3□□□□□ -0.44
RAB35-204ENST00000540803 ATP5L2Q7Z4Y8 100 aa12.3□□□□□ -0.44
RAB35-204ENST00000540803 ZNF664Q8N3J9 261 aa12.3□□□□□ -0.44
RAB35-204ENST00000540803 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.3□□□□□ -0.44
RAB35-204ENST00000540803 HERC1Q15751 4861 aa12.29□□□□□ -0.44
RAB35-204ENST00000540803 PANO1I0J062 215 aa12.29□□□□□ -0.44
RAB35-204ENST00000540803 XCL1P47992 114 aa12.29□□□□□ -0.44
RAB35-204ENST00000540803 UBE2D4Q9Y2X8 147 aa12.29□□□□□ -0.44
RAB35-204ENST00000540803 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.28□□□□□ -0.44
RAB35-204ENST00000540803 CCL25O15444 150 aa12.28□□□□□ -0.44
RAB35-204ENST00000540803 HIGD2BQ4VC39 106 aa12.28□□□□□ -0.44
RAB35-204ENST00000540803 CSDC2Q9Y534 153 aaKnown RBP12.28□□□□□ -0.44
RAB35-204ENST00000540803 NPYP01303 97 aa12.27□□□□□ -0.45
RAB35-204ENST00000540803 IFITM2Q01629 132 aa12.27□□□□□ -0.45
RAB35-204ENST00000540803 ANAPC16Q96DE5 110 aa12.27□□□□□ -0.45
RAB35-204ENST00000540803 SMIM2Q9BVW6 85 aa12.27□□□□□ -0.45
RAB35-204ENST00000540803 PKHD1L1Q86WI1 4243 aa12.27□□□□□ -0.45
RAB35-204ENST00000540803 IGHV3-64A0A075B6Q5 118 aa12.26□□□□□ -0.45
RAB35-204ENST00000540803 GVQW2A0A096LPI5 108 aaPredicted RBP12.26□□□□□ -0.45
RAB35-204ENST00000540803 SS18Q15532 418 aa12.26□□□□□ -0.45
RAB35-204ENST00000540803 PHOX2AO14813 284 aa12.25□□□□□ -0.45
RAB35-204ENST00000540803 PPBPP02775 128 aa12.25□□□□□ -0.45
RAB35-204ENST00000540803 MT-ND4LP03901 98 aa12.25□□□□□ -0.45
RAB35-204ENST00000540803 KRTAP10-4P60372 401 aaPredicted RBP12.25□□□□□ -0.45
RAB35-204ENST00000540803 SMAGPQ0VAQ4 97 aa12.25□□□□□ -0.45
RAB35-204ENST00000540803 TCAPO15273 167 aa12.24□□□□□ -0.45
RAB35-204ENST00000540803 CIRBPQ14011 172 aaKnown RBP12.24□□□□□ -0.45
RAB35-204ENST00000540803 RNASE13Q5GAN3 156 aaKnown RBP12.24□□□□□ -0.45
RAB35-204ENST00000540803 CD164L2Q6UWJ8 174 aa12.24□□□□□ -0.45
RAB35-204ENST00000540803 ORMDL3Q8N138 153 aa12.24□□□□□ -0.45
RAB35-204ENST00000540803 Q6ZUT4 128 aa12.23□□□□□ -0.45
RAB35-204ENST00000540803 TMEM18Q96B42 140 aa12.23□□□□□ -0.45
RAB35-204ENST00000540803 TIMM21Q9BVV7 248 aa12.23□□□□□ -0.45
RAB35-204ENST00000540803 IGHV1-58A0A0C4DH39 117 aa12.22□□□□□ -0.45
RAB35-204ENST00000540803 ADCYAP1P18509 176 aa12.22□□□□□ -0.45
RAB35-204ENST00000540803 RPL39P62891 51 aaKnown RBP12.22□□□□□ -0.45
RAB35-204ENST00000540803 TMEM136Q6ZRR5 245 aa12.22□□□□□ -0.45
RAB35-204ENST00000540803 FAT3Q8TDW7 4589 aa12.21□□□□□ -0.45
RAB35-204ENST00000540803 CHTF8P0CG12 524 aa12.21□□□□□ -0.45
RAB35-204ENST00000540803 PRELID3AQ96N28 172 aa12.21□□□□□ -0.45
RAB35-204ENST00000540803 LRP1Q07954 4544 aaKnown RBP12.21□□□□□ -0.45
RAB35-204ENST00000540803 C1orf196B1AJZ1 125 aa12.2□□□□□ -0.46
RAB35-204ENST00000540803 UQCC3Q6UW78 93 aa12.2□□□□□ -0.46
RAB35-204ENST00000540803 SPACA4Q8TDM5 124 aa12.2□□□□□ -0.46
RAB35-204ENST00000540803 FAM104AQ969W3 186 aa12.2□□□□□ -0.46
RAB35-204ENST00000540803 DMBT1Q9UGM3 2413 aaPredicted RBP12.2□□□□□ -0.46
RAB35-204ENST00000540803 TRAV13-1A0A0B4J241 112 aa12.19□□□□□ -0.46
RAB35-204ENST00000540803 COX6A2Q02221 97 aa12.19□□□□□ -0.46
RAB35-204ENST00000540803 LINC00526Q96FQ7 95 aa12.19□□□□□ -0.46
RAB35-204ENST00000540803 TMEM218A2RU14 115 aa12.18□□□□□ -0.46
RAB35-204ENST00000540803 PRSS3P2Q8NHM4 247 aa12.18□□□□□ -0.46
RAB35-204ENST00000540803 PRSS47A8MTI9 375 aa12.17□□□□□ -0.46
RAB35-204ENST00000540803 RPL37AP61513 92 aaKnown RBP12.17□□□□□ -0.46
RAB35-204ENST00000540803 SPANXA1Q9NS26 97 aa12.17□□□□□ -0.46
RAB35-204ENST00000540803 A0A087WYN8 130 aa12.16□□□□□ -0.46
RAB35-204ENST00000540803 COX7A2LO14548 114 aa12.16□□□□□ -0.46
RAB35-204ENST00000540803 IMMP2LQ96T52 175 aa12.16□□□□□ -0.46
RAB35-204ENST00000540803 OPRPNQ99935 248 aaPredicted RBP12.16□□□□□ -0.46
RAB35-204ENST00000540803 LAMTOR2Q9Y2Q5 125 aa12.16□□□□□ -0.46
RAB35-204ENST00000540803 RAB5AP20339 215 aa12.15□□□□□ -0.46
RAB35-204ENST00000540803 MRPS36P82909 103 aaKnown RBP12.15□□□□□ -0.46
RAB35-204ENST00000540803 DPH3Q96FX2 82 aa12.15□□□□□ -0.46
RAB35-204ENST00000540803 LOC389332A0A1B0GUA5 103 aa12.14□□□□□ -0.47
RAB35-204ENST00000540803 ZNF561-AS1K7EIQ3 104 aa12.14□□□□□ -0.47
RAB35-204ENST00000540803 MALP21145 153 aa12.14□□□□□ -0.47
RAB35-204ENST00000540803 CARD19Q96LW7 228 aa12.14□□□□□ -0.47
RAB35-204ENST00000540803 MAP1LC3AQ9H492 121 aa12.14□□□□□ -0.47
RAB35-204ENST00000540803 IGKV2-24A0A0C4DH68 120 aa12.13□□□□□ -0.47
RAB35-204ENST00000540803 C5orf38Q86SI9 138 aa12.13□□□□□ -0.47
RAB35-204ENST00000540803 SEC11CQ9BY50 192 aa12.13□□□□□ -0.47
RAB35-204ENST00000540803 CTDSP1Q9GZU7 261 aa12.13□□□□□ -0.47
RAB35-204ENST00000540803 PLAC8Q9NZF1 115 aa12.13□□□□□ -0.47
RAB35-204ENST00000540803 SYCNQ0VAF6 134 aa12.12□□□□□ -0.47
RAB35-204ENST00000540803 COMMD7Q86VX2 200 aa12.12□□□□□ -0.47
RAB35-204ENST00000540803 IGLV4-69A0A075B6H9 119 aa12.11□□□□□ -0.47
RAB35-204ENST00000540803 A0A096LNI7 61 aa12.11□□□□□ -0.47
RAB35-204ENST00000540803 IFI27P40305 119 aaPredicted RBP12.11□□□□□ -0.47
RAB35-204ENST00000540803 MAJINQ3KP22 176 aa12.11□□□□□ -0.47
RAB35-204ENST00000540803 Q8N8P6 123 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms