RNA–Protein interactions for RNA: ENST00000540781.5

RAP1B-222, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-222	ENST00000540781	CIRBP-AS1	Q8TBR5	109 aa		12.86	□□□□□ -0.35
RAP1B-222	ENST00000540781	CNBP	P62633	177 aa	Known RBP	12.85	□□□□□ -0.35
RAP1B-222	ENST00000540781	MRPL52	Q86TS9	123 aa	Known RBP	12.85	□□□□□ -0.35
RAP1B-222	ENST00000540781	KIR2DL4	Q99706	377 aa		12.85	□□□□□ -0.35
RAP1B-222	ENST00000540781		A0A1B0GXF2	115 aa		12.84	□□□□□ -0.35
RAP1B-222	ENST00000540781		F8W036	122 aa		12.84	□□□□□ -0.35
RAP1B-222	ENST00000540781	PLA2G1B	P04054	148 aa	Known RBP	12.84	□□□□□ -0.35
RAP1B-222	ENST00000540781	PNRC1	Q12796	327 aa	Predicted RBP	12.83	□□□□□ -0.36
RAP1B-222	ENST00000540781	C15orf56	Q8N910	161 aa		12.83	□□□□□ -0.36
RAP1B-222	ENST00000540781	C20orf78	Q9BR46	151 aa		12.83	□□□□□ -0.36
RAP1B-222	ENST00000540781	CDC42SE2	Q9NRR3	84 aa		12.83	□□□□□ -0.36
RAP1B-222	ENST00000540781	TRBV24-1	A0A075B6N3	115 aa		12.82	□□□□□ -0.36
RAP1B-222	ENST00000540781	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	12.82	□□□□□ -0.36
RAP1B-222	ENST00000540781	LINC00959	A0A1B0GUT2	108 aa		12.82	□□□□□ -0.36
RAP1B-222	ENST00000540781	CLLU1	Q5K131	121 aa		12.82	□□□□□ -0.36
RAP1B-222	ENST00000540781	SDIM1	Q6ZPB5	146 aa		12.82	□□□□□ -0.36
RAP1B-222	ENST00000540781	FLG2	Q5D862	2391 aa	Predicted RBP	12.82	□□□□□ -0.36
RAP1B-222	ENST00000540781		D6R8Y8	96 aa		12.81	□□□□□ -0.36
RAP1B-222	ENST00000540781	TNFRSF6B	O95407	300 aa		12.81	□□□□□ -0.36
RAP1B-222	ENST00000540781	SLPI	P03973	132 aa		12.81	□□□□□ -0.36
RAP1B-222	ENST00000540781	SMAGP	Q0VAQ4	97 aa		12.81	□□□□□ -0.36
RAP1B-222	ENST00000540781	ZNF664	Q8N3J9	261 aa		12.81	□□□□□ -0.36
RAP1B-222	ENST00000540781	CCL25	O15444	150 aa		12.8	□□□□□ -0.36
RAP1B-222	ENST00000540781	MT-ND4L	P03901	98 aa		12.8	□□□□□ -0.36
RAP1B-222	ENST00000540781	XCL1	P47992	114 aa		12.8	□□□□□ -0.36
RAP1B-222	ENST00000540781	RPL32	P62910	135 aa	Known RBP	12.8	□□□□□ -0.36
RAP1B-222	ENST00000540781	FOXI1	Q12951	378 aa		12.8	□□□□□ -0.36
RAP1B-222	ENST00000540781	SS18	Q15532	418 aa		12.8	□□□□□ -0.36
RAP1B-222	ENST00000540781	HIGD2B	Q4VC39	106 aa		12.8	□□□□□ -0.36
RAP1B-222	ENST00000540781	ATP5L2	Q7Z4Y8	100 aa		12.8	□□□□□ -0.36
RAP1B-222	ENST00000540781	IGHV3-64	A0A075B6Q5	118 aa		12.79	□□□□□ -0.36
RAP1B-222	ENST00000540781	ANAPC16	Q96DE5	110 aa		12.79	□□□□□ -0.36
RAP1B-222	ENST00000540781	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	12.79	□□□□□ -0.36
RAP1B-222	ENST00000540781	TCAP	O15273	167 aa		12.78	□□□□□ -0.36
RAP1B-222	ENST00000540781	NPY	P01303	97 aa		12.78	□□□□□ -0.36
RAP1B-222	ENST00000540781	PPBP	P02775	128 aa		12.78	□□□□□ -0.36
RAP1B-222	ENST00000540781	TMEM18	Q96B42	140 aa		12.78	□□□□□ -0.36
RAP1B-222	ENST00000540781	UBE2D4	Q9Y2X8	147 aa		12.78	□□□□□ -0.36
RAP1B-222	ENST00000540781	CSDC2	Q9Y534	153 aa	Known RBP	12.78	□□□□□ -0.36
RAP1B-222	ENST00000540781	SMIM2	Q9BVW6	85 aa		12.77	□□□□□ -0.37
RAP1B-222	ENST00000540781	GVQW2	A0A096LPI5	108 aa	Predicted RBP	12.76	□□□□□ -0.37
RAP1B-222	ENST00000540781	PANO1	I0J062	215 aa		12.76	□□□□□ -0.37
RAP1B-222	ENST00000540781	PHOX2A	O14813	284 aa		12.76	□□□□□ -0.37
RAP1B-222	ENST00000540781	TIMM21	Q9BVV7	248 aa		12.76	□□□□□ -0.37
RAP1B-222	ENST00000540781	IFITM2	Q01629	132 aa		12.75	□□□□□ -0.37
RAP1B-222	ENST00000540781	CD164L2	Q6UWJ8	174 aa		12.75	□□□□□ -0.37
RAP1B-222	ENST00000540781	TMEM136	Q6ZRR5	245 aa		12.75	□□□□□ -0.37
RAP1B-222	ENST00000540781	ORMDL3	Q8N138	153 aa		12.75	□□□□□ -0.37
RAP1B-222	ENST00000540781	IGHV1-58	A0A0C4DH39	117 aa		12.74	□□□□□ -0.37
RAP1B-222	ENST00000540781	RNASE13	Q5GAN3	156 aa	Known RBP	12.74	□□□□□ -0.37
RAP1B-222	ENST00000540781	PRELID3A	Q96N28	172 aa		12.74	□□□□□ -0.37
RAP1B-222	ENST00000540781	DMBT1	Q9UGM3	2413 aa	Predicted RBP	12.74	□□□□□ -0.37
RAP1B-222	ENST00000540781	C1orf196	B1AJZ1	125 aa		12.73	□□□□□ -0.37
RAP1B-222	ENST00000540781	DPH3	Q96FX2	82 aa		12.73	□□□□□ -0.37
RAP1B-222	ENST00000540781	RPL39	P62891	51 aa	Known RBP	12.72	□□□□□ -0.37
RAP1B-222	ENST00000540781	CIRBP	Q14011	172 aa	Known RBP	12.72	□□□□□ -0.37
RAP1B-222	ENST00000540781	UQCC3	Q6UW78	93 aa		12.72	□□□□□ -0.37
RAP1B-222	ENST00000540781		Q6ZUT4	128 aa		12.72	□□□□□ -0.37
RAP1B-222	ENST00000540781	TRAV13-1	A0A0B4J241	112 aa		12.71	□□□□□ -0.37
RAP1B-222	ENST00000540781	CHTF8	P0CG12	524 aa		12.71	□□□□□ -0.37
RAP1B-222	ENST00000540781	KRTAP10-4	P60372	401 aa	Predicted RBP	12.7	□□□□□ -0.38
RAP1B-222	ENST00000540781	COX6A2	Q02221	97 aa		12.7	□□□□□ -0.38
RAP1B-222	ENST00000540781	TMEM218	A2RU14	115 aa		12.69	□□□□□ -0.38
RAP1B-222	ENST00000540781	RAB5A	P20339	215 aa		12.69	□□□□□ -0.38
RAP1B-222	ENST00000540781	LINC00526	Q96FQ7	95 aa		12.69	□□□□□ -0.38
RAP1B-222	ENST00000540781	SPANXA1	Q9NS26	97 aa		12.69	□□□□□ -0.38
RAP1B-222	ENST00000540781	COX7A2L	O14548	114 aa		12.68	□□□□□ -0.38
RAP1B-222	ENST00000540781	ADCYAP1	P18509	176 aa		12.68	□□□□□ -0.38
RAP1B-222	ENST00000540781	MAL	P21145	153 aa		12.68	□□□□□ -0.38
RAP1B-222	ENST00000540781	RPL37A	P61513	92 aa	Known RBP	12.68	□□□□□ -0.38
RAP1B-222	ENST00000540781	PRSS3P2	Q8NHM4	247 aa		12.68	□□□□□ -0.38
RAP1B-222	ENST00000540781	SPACA4	Q8TDM5	124 aa		12.68	□□□□□ -0.38
RAP1B-222	ENST00000540781	LAMTOR2	Q9Y2Q5	125 aa		12.68	□□□□□ -0.38
RAP1B-222	ENST00000540781	MYCBP2	O75592	4640 aa		12.67	□□□□□ -0.38
RAP1B-222	ENST00000540781	ZNF561-AS1	K7EIQ3	104 aa		12.67	□□□□□ -0.38
RAP1B-222	ENST00000540781		A0A087WYN8	130 aa		12.66	□□□□□ -0.38
RAP1B-222	ENST00000540781	LOC389332	A0A1B0GUA5	103 aa		12.66	□□□□□ -0.38
RAP1B-222	ENST00000540781	PRSS47	A8MTI9	375 aa		12.66	□□□□□ -0.38
RAP1B-222	ENST00000540781	FAM104A	Q969W3	186 aa		12.66	□□□□□ -0.38
RAP1B-222	ENST00000540781	IMMP2L	Q96T52	175 aa		12.66	□□□□□ -0.38
RAP1B-222	ENST00000540781	OPRPN	Q99935	248 aa	Predicted RBP	12.66	□□□□□ -0.38
RAP1B-222	ENST00000540781	MAP1LC3A	Q9H492	121 aa		12.66	□□□□□ -0.38
RAP1B-222	ENST00000540781	MRPS36	P82909	103 aa	Known RBP	12.65	□□□□□ -0.38
RAP1B-222	ENST00000540781	C5orf38	Q86SI9	138 aa		12.65	□□□□□ -0.38
RAP1B-222	ENST00000540781	CARD19	Q96LW7	228 aa		12.65	□□□□□ -0.38
RAP1B-222	ENST00000540781	CTDSP1	Q9GZU7	261 aa		12.65	□□□□□ -0.38
RAP1B-222	ENST00000540781	IGKV2-24	A0A0C4DH68	120 aa		12.64	□□□□□ -0.39
RAP1B-222	ENST00000540781	SYCN	Q0VAF6	134 aa		12.64	□□□□□ -0.39
RAP1B-222	ENST00000540781	MAJIN	Q3KP22	176 aa		12.64	□□□□□ -0.39
RAP1B-222	ENST00000540781	IFI27	P40305	119 aa	Predicted RBP	12.63	□□□□□ -0.39
RAP1B-222	ENST00000540781	COMMD7	Q86VX2	200 aa		12.63	□□□□□ -0.39
RAP1B-222	ENST00000540781		Q8N8P6	123 aa		12.63	□□□□□ -0.39
RAP1B-222	ENST00000540781	SEC11C	Q9BY50	192 aa		12.63	□□□□□ -0.39
RAP1B-222	ENST00000540781	PKIG	Q9Y2B9	76 aa		12.63	□□□□□ -0.39
RAP1B-222	ENST00000540781	IGLV4-69	A0A075B6H9	119 aa		12.62	□□□□□ -0.39
RAP1B-222	ENST00000540781	IFITM10	A6NMD0	228 aa		12.62	□□□□□ -0.39
RAP1B-222	ENST00000540781		J3QL48	77 aa		12.62	□□□□□ -0.39
RAP1B-222	ENST00000540781	PLAC8	Q9NZF1	115 aa		12.62	□□□□□ -0.39
RAP1B-222	ENST00000540781		A0A096LNI7	61 aa		12.61	□□□□□ -0.39
RAP1B-222	ENST00000540781	APOM	O95445	188 aa		12.61	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms