RNA–Protein interactions for RNA: ENST00000540725.5

SNHG1-213, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 1 (best) BASIC

Gene SNHG1, Length 1,374 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-213ENST00000540725 FAM231BA6NCW3 169 aa8.87□□□□□ -0.99
SNHG1-213ENST00000540725 A8MWL6 223 aa8.87□□□□□ -0.99
SNHG1-213ENST00000540725 TMEM250H0YL14 139 aa8.87□□□□□ -0.99
SNHG1-213ENST00000540725 I3L3M4 83 aa8.87□□□□□ -0.99
SNHG1-213ENST00000540725 SCO1O75880 301 aa8.87□□□□□ -0.99
SNHG1-213ENST00000540725 XCL1P47992 114 aa8.87□□□□□ -0.99
SNHG1-213ENST00000540725 FAM231DQ6ZW35 169 aa8.87□□□□□ -0.99
SNHG1-213ENST00000540725 TMEM101Q96IK0 257 aa8.87□□□□□ -0.99
SNHG1-213ENST00000540725 BTF3L4Q96K17 158 aa8.87□□□□□ -0.99
SNHG1-213ENST00000540725 APOC3P02656 99 aa8.86□□□□□ -0.99
SNHG1-213ENST00000540725 PRR3P79522 188 aaKnown RBP8.86□□□□□ -0.99
SNHG1-213ENST00000540725 LINC00959A0A1B0GUT2 108 aa8.86□□□□□ -0.99
SNHG1-213ENST00000540725 CCL25O15444 150 aa8.86□□□□□ -0.99
SNHG1-213ENST00000540725 GAS8-AS1O95177 125 aa8.86□□□□□ -0.99
SNHG1-213ENST00000540725 TSHBP01222 138 aa8.86□□□□□ -0.99
SNHG1-213ENST00000540725 ESDP10768 282 aa8.86□□□□□ -0.99
SNHG1-213ENST00000540725 CT83Q5H943 113 aa8.86□□□□□ -0.99
SNHG1-213ENST00000540725 TMEM242Q9NWH2 141 aa8.86□□□□□ -0.99
SNHG1-213ENST00000540725 LRP2P98164 4655 aa8.85□□□□□ -0.99
SNHG1-213ENST00000540725 IGHV1-58A0A0C4DH39 117 aa8.85□□□□□ -0.99
SNHG1-213ENST00000540725 SNAPINO95295 136 aa8.85□□□□□ -0.99
SNHG1-213ENST00000540725 BORCS7Q96B45 105 aa8.85□□□□□ -0.99
SNHG1-213ENST00000540725 LINC00526Q96FQ7 95 aa8.85□□□□□ -0.99
SNHG1-213ENST00000540725 MRAP2Q96G30 205 aa8.85□□□□□ -0.99
SNHG1-213ENST00000540725 ST20Q9HBF5 79 aa8.85□□□□□ -0.99
SNHG1-213ENST00000540725 TMA7Q9Y2S6 64 aaKnown RBP8.85□□□□□ -0.99
SNHG1-213ENST00000540725 LOC105371267A0A1B0GV96 52 aa8.84□□□□□ -0.99
SNHG1-213ENST00000540725 F8W036 122 aa8.84□□□□□ -0.99
SNHG1-213ENST00000540725 CEBPGP53567 150 aa8.84□□□□□ -0.99
SNHG1-213ENST00000540725 PEA15Q15121 130 aa8.84□□□□□ -0.99
SNHG1-213ENST00000540725 CARD19Q96LW7 228 aa8.84□□□□□ -0.99
SNHG1-213ENST00000540725 LINC00474Q9P2X8 69 aa8.84□□□□□ -0.99
SNHG1-213ENST00000540725 PKIGQ9Y2B9 76 aa8.84□□□□□ -0.99
SNHG1-213ENST00000540725 ADCYAP1P18509 176 aa8.83□□□□□ -1
SNHG1-213ENST00000540725 SS18Q15532 418 aa8.83□□□□□ -1
SNHG1-213ENST00000540725 MRPL52Q86TS9 123 aaKnown RBP8.83□□□□□ -1
SNHG1-213ENST00000540725 LINC01600Q96MT4 127 aa8.83□□□□□ -1
SNHG1-213ENST00000540725 TMEM191AQ9H0A3 160 aa8.83□□□□□ -1
SNHG1-213ENST00000540725 CDC42SE2Q9NRR3 84 aa8.83□□□□□ -1
SNHG1-213ENST00000540725 A0A1B0GUT8 65 aa8.82□□□□□ -1
SNHG1-213ENST00000540725 HIGD1CA8MV81 97 aa8.82□□□□□ -1
SNHG1-213ENST00000540725 POLR2KP53803 58 aaKnown RBP8.82□□□□□ -1
SNHG1-213ENST00000540725 TRBV27A0A0K0K1C4 114 aa8.81□□□□□ -1
SNHG1-213ENST00000540725 C7orf77A4D0Y5 90 aa8.81□□□□□ -1
SNHG1-213ENST00000540725 SRSF3P84103 164 aaKnown RBP8.81□□□□□ -1
SNHG1-213ENST00000540725 SYCNQ0VAF6 134 aa8.81□□□□□ -1
SNHG1-213ENST00000540725 CD164L2Q6UWJ8 174 aa8.81□□□□□ -1
SNHG1-213ENST00000540725 TSKUQ8WUA8 353 aa8.81□□□□□ -1
SNHG1-213ENST00000540725 SMIM7Q9BQ49 75 aa8.81□□□□□ -1
SNHG1-213ENST00000540725 ZNF561-AS1K7EIQ3 104 aa8.8□□□□□ -1
SNHG1-213ENST00000540725 RAB4AP20338 218 aa8.8□□□□□ -1
SNHG1-213ENST00000540725 LINC01551Q86U37 167 aa8.8□□□□□ -1
SNHG1-213ENST00000540725 AMN1Q8IY45 258 aa8.8□□□□□ -1
SNHG1-213ENST00000540725 ZNF664Q8N3J9 261 aa8.8□□□□□ -1
SNHG1-213ENST00000540725 CAMPP49913 170 aa8.79□□□□□ -1
SNHG1-213ENST00000540725 OSTCQ9NRP0 149 aa8.79□□□□□ -1
SNHG1-213ENST00000540725 A0A0J9YXV3 536 aa8.78□□□□□ -1
SNHG1-213ENST00000540725 SMKR1H3BMG3 65 aa8.78□□□□□ -1
SNHG1-213ENST00000540725 SPINK6Q6UWN8 80 aa8.78□□□□□ -1
SNHG1-213ENST00000540725 EIF5A2Q9GZV4 153 aaKnown RBP8.78□□□□□ -1
SNHG1-213ENST00000540725 ZNF727A8MUV8 499 aa8.77□□□□□ -1.01
SNHG1-213ENST00000540725 VCYO14598 125 aa8.77□□□□□ -1.01
SNHG1-213ENST00000540725 FCER1GP30273 86 aa8.77□□□□□ -1.01
SNHG1-213ENST00000540725 PTTG1IPP53801 180 aa8.77□□□□□ -1.01
SNHG1-213ENST00000540725 ODF1Q14990 250 aa8.77□□□□□ -1.01
SNHG1-213ENST00000540725 REG3GQ6UW15 175 aa8.77□□□□□ -1.01
SNHG1-213ENST00000540725 Q6ZRP5 223 aa8.77□□□□□ -1.01
SNHG1-213ENST00000540725 RNF213Q63HN8 5207 aa8.77□□□□□ -1.01
SNHG1-213ENST00000540725 IGLV4-69A0A075B6H9 119 aa8.76□□□□□ -1.01
SNHG1-213ENST00000540725 LOC107984640A0A0U1RRK4 108 aa8.76□□□□□ -1.01
SNHG1-213ENST00000540725 C1orf196B1AJZ1 125 aa8.76□□□□□ -1.01
SNHG1-213ENST00000540725 C9JQL5 133 aa8.76□□□□□ -1.01
SNHG1-213ENST00000540725 COX7A2LO14548 114 aa8.76□□□□□ -1.01
SNHG1-213ENST00000540725 MALP21145 153 aa8.76□□□□□ -1.01
SNHG1-213ENST00000540725 FAM74A3Q4VXF1 159 aa8.76□□□□□ -1.01
SNHG1-213ENST00000540725 ISOC2Q96AB3 205 aa8.76□□□□□ -1.01
SNHG1-213ENST00000540725 SUMO2P61956 95 aaKnown RBP8.75□□□□□ -1.01
SNHG1-213ENST00000540725 SMAGPQ0VAQ4 97 aa8.75□□□□□ -1.01
SNHG1-213ENST00000540725 GAGE2BQ13066 116 aa8.75□□□□□ -1.01
SNHG1-213ENST00000540725 SRSF9Q13242 221 aaKnown RBP eCLIP8.75□□□□□ -1.01
SNHG1-213ENST00000540725 RIGQ13278 110 aa8.75□□□□□ -1.01
SNHG1-213ENST00000540725 RNASE13Q5GAN3 156 aaKnown RBP8.75□□□□□ -1.01
SNHG1-213ENST00000540725 NRACQ8N912 160 aa8.75□□□□□ -1.01
SNHG1-213ENST00000540725 NUP35Q8NFH5 326 aa8.75□□□□□ -1.01
SNHG1-213ENST00000540725 UBE2D4Q9Y2X8 147 aa8.75□□□□□ -1.01
SNHG1-213ENST00000540725 CSDC2Q9Y534 153 aaKnown RBP8.75□□□□□ -1.01
SNHG1-213ENST00000540725 V9GYV3 84 aa8.75□□□□□ -1.01
SNHG1-213ENST00000540725 PPP1R17O96001 155 aa8.74□□□□□ -1.01
SNHG1-213ENST00000540725 SRP19P09132 144 aaKnown RBP8.74□□□□□ -1.01
SNHG1-213ENST00000540725 KRTAP10-8P60410 259 aa8.74□□□□□ -1.01
SNHG1-213ENST00000540725 RHEBQ15382 184 aa8.74□□□□□ -1.01
SNHG1-213ENST00000540725 CAMK2N2Q96S95 79 aa8.74□□□□□ -1.01
SNHG1-213ENST00000540725 KIR2DL4Q99706 377 aa8.74□□□□□ -1.01
SNHG1-213ENST00000540725 SMCO4Q9NRQ5 59 aa8.74□□□□□ -1.01
SNHG1-213ENST00000540725 TRAV13-1A0A0B4J241 112 aa8.73□□□□□ -1.01
SNHG1-213ENST00000540725 PPP1R2P9O14990 202 aa8.73□□□□□ -1.01
SNHG1-213ENST00000540725 Q6ZUT4 128 aa8.73□□□□□ -1.01
SNHG1-213ENST00000540725 C5orf38Q86SI9 138 aa8.73□□□□□ -1.01
SNHG1-213ENST00000540725 A0A1W2PNN7 141 aa8.72□□□□□ -1.01
SNHG1-213ENST00000540725 APOMO95445 188 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms