RNA–Protein interactions for RNA: ENST00000538439.1

NPIPB3-209, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-209ENST00000538439 PCLOQ9Y6V0 5065 aa6.98□□□□□ -1.29
NPIPB3-209ENST00000538439 TRBV25-1A0A075B6N4 114 aa6.98□□□□□ -1.29
NPIPB3-209ENST00000538439 TRBV6-8A0A0A6YYG3 113 aa6.98□□□□□ -1.29
NPIPB3-209ENST00000538439 IGLL5B9A064 214 aa6.98□□□□□ -1.29
NPIPB3-209ENST00000538439 SMAGPQ0VAQ4 97 aa6.98□□□□□ -1.29
NPIPB3-209ENST00000538439 CEMP1Q6PRD7 247 aaPredicted RBP6.98□□□□□ -1.29
NPIPB3-209ENST00000538439 C2orf66Q6UXQ4 117 aa6.98□□□□□ -1.29
NPIPB3-209ENST00000538439 PACRGQ96M98 296 aaPredicted RBP6.98□□□□□ -1.29
NPIPB3-209ENST00000538439 TMEM243Q9BU79 118 aa6.98□□□□□ -1.29
NPIPB3-209ENST00000538439 KLK5Q9Y337 293 aaPredicted RBP6.98□□□□□ -1.29
NPIPB3-209ENST00000538439 STAB2Q8WWQ8 2551 aa6.98□□□□□ -1.29
NPIPB3-209ENST00000538439 NUPR2A6NF83 97 aa6.97□□□□□ -1.29
NPIPB3-209ENST00000538439 LEPROTL1O95214 131 aa6.97□□□□□ -1.29
NPIPB3-209ENST00000538439 FABP4P15090 132 aa6.97□□□□□ -1.29
NPIPB3-209ENST00000538439 RYR1P21817 5038 aa6.97□□□□□ -1.29
NPIPB3-209ENST00000538439 NTM-AS1Q6ZSK4 140 aa6.97□□□□□ -1.29
NPIPB3-209ENST00000538439 C20orf203Q8NBC4 194 aa6.97□□□□□ -1.29
NPIPB3-209ENST00000538439 TOMM6Q96B49 74 aa6.97□□□□□ -1.29
NPIPB3-209ENST00000538439 CHCHD7Q9BUK0 85 aa6.97□□□□□ -1.29
NPIPB3-209ENST00000538439 HSPB8Q9UJY1 196 aa6.97□□□□□ -1.29
NPIPB3-209ENST00000538439 A0A096LNJ9 63 aa6.96□□□□□ -1.3
NPIPB3-209ENST00000538439 H7C423 109 aa6.96□□□□□ -1.3
NPIPB3-209ENST00000538439 UBE2L6O14933 153 aa6.96□□□□□ -1.3
NPIPB3-209ENST00000538439 ATP5LO75964 103 aa6.96□□□□□ -1.3
NPIPB3-209ENST00000538439 KRTAP10-2P60368 255 aa6.96□□□□□ -1.3
NPIPB3-209ENST00000538439 SCGB3A1Q96QR1 104 aa6.96□□□□□ -1.3
NPIPB3-209ENST00000538439 HIST1H2BLQ99880 126 aa6.96□□□□□ -1.3
NPIPB3-209ENST00000538439 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.95□□□□□ -1.3
NPIPB3-209ENST00000538439 TRAV8-6A0A0B4J262 113 aa6.95□□□□□ -1.3
NPIPB3-209ENST00000538439 IGKV2-29A2NJV5 120 aaPredicted RBP6.95□□□□□ -1.3
NPIPB3-209ENST00000538439 PKIAP61925 76 aa6.95□□□□□ -1.3
NPIPB3-209ENST00000538439 LELP1Q5T871 98 aa6.95□□□□□ -1.3
NPIPB3-209ENST00000538439 AMMECR1LQ6DCA0 310 aa6.95□□□□□ -1.3
NPIPB3-209ENST00000538439 LYPD5Q6UWN5 251 aa6.95□□□□□ -1.3
NPIPB3-209ENST00000538439 ERASQ7Z444 233 aa6.95□□□□□ -1.3
NPIPB3-209ENST00000538439 CHCHD5Q9BSY4 110 aa6.95□□□□□ -1.3
NPIPB3-209ENST00000538439 HUWE1Q7Z6Z7 4374 aaKnown RBP6.95□□□□□ -1.3
NPIPB3-209ENST00000538439 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.94□□□□□ -1.3
NPIPB3-209ENST00000538439 TCTAP57738 103 aa6.94□□□□□ -1.3
NPIPB3-209ENST00000538439 RPL39P62891 51 aaKnown RBP6.94□□□□□ -1.3
NPIPB3-209ENST00000538439 PAPPA-AS1Q5QFB9 102 aa6.94□□□□□ -1.3
NPIPB3-209ENST00000538439 IFI27L1Q96BM0 104 aa6.94□□□□□ -1.3
NPIPB3-209ENST00000538439 TMEM141Q96I45 108 aa6.94□□□□□ -1.3
NPIPB3-209ENST00000538439 TMEM101Q96IK0 257 aa6.94□□□□□ -1.3
NPIPB3-209ENST00000538439 TIMM21Q9BVV7 248 aa6.94□□□□□ -1.3
NPIPB3-209ENST00000538439 SPANXA1Q9NS26 97 aa6.94□□□□□ -1.3
NPIPB3-209ENST00000538439 STARD9Q9P2P6 4700 aa6.93□□□□□ -1.3
NPIPB3-209ENST00000538439 IFITM10A6NMD0 228 aa6.93□□□□□ -1.3
NPIPB3-209ENST00000538439 TMEM262E9PQX1 116 aa6.93□□□□□ -1.3
NPIPB3-209ENST00000538439 FGF6P10767 208 aa6.93□□□□□ -1.3
NPIPB3-209ENST00000538439 CCL18P55774 89 aa6.93□□□□□ -1.3
NPIPB3-209ENST00000538439 GAGE6Q13070 117 aa6.93□□□□□ -1.3
NPIPB3-209ENST00000538439 Q6ZN92 141 aa6.93□□□□□ -1.3
NPIPB3-209ENST00000538439 OR10D4PQ8NGN7 298 aa6.93□□□□□ -1.3
NPIPB3-209ENST00000538439 TIMM17AQ99595 171 aa6.93□□□□□ -1.3
NPIPB3-209ENST00000538439 MAP1LC3CQ9BXW4 147 aa6.93□□□□□ -1.3
NPIPB3-209ENST00000538439 PYGO1Q9Y3Y4 419 aa6.93□□□□□ -1.3
NPIPB3-209ENST00000538439 CSMD3Q7Z407 3707 aa6.93□□□□□ -1.3
NPIPB3-209ENST00000538439 IGIPA6NJ69 53 aa6.92□□□□□ -1.3
NPIPB3-209ENST00000538439 PRSS1P07477 247 aa6.92□□□□□ -1.3
NPIPB3-209ENST00000538439 ZNF25P17030 456 aaPredicted RBP6.92□□□□□ -1.3
NPIPB3-209ENST00000538439 AKR1D1P51857 326 aa6.92□□□□□ -1.3
NPIPB3-209ENST00000538439 KRTDAPP60985 99 aa6.92□□□□□ -1.3
NPIPB3-209ENST00000538439 ESRGQ1W209 222 aa6.92□□□□□ -1.3
NPIPB3-209ENST00000538439 MRPL52Q86TS9 123 aaKnown RBP6.92□□□□□ -1.3
NPIPB3-209ENST00000538439 MUC7Q8TAX7 377 aa6.92□□□□□ -1.3
NPIPB3-209ENST00000538439 UBE2D4Q9Y2X8 147 aa6.92□□□□□ -1.3
NPIPB3-209ENST00000538439 CSDC2Q9Y534 153 aaKnown RBP6.92□□□□□ -1.3
NPIPB3-209ENST00000538439 LINC00173Q6ZV60 143 aa6.91□□□□□ -1.3
NPIPB3-209ENST00000538439 OR5A1Q8NGJ0 315 aa6.91□□□□□ -1.3
NPIPB3-209ENST00000538439 VCX2Q9H322 139 aa6.91□□□□□ -1.3
NPIPB3-209ENST00000538439 APLNQ9ULZ1 77 aa6.91□□□□□ -1.3
NPIPB3-209ENST00000538439 A0A087WX48 190 aa6.9□□□□□ -1.3
NPIPB3-209ENST00000538439 A0A1B0GUV1 79 aa6.9□□□□□ -1.3
NPIPB3-209ENST00000538439 LOC105371267A0A1B0GV96 52 aa6.9□□□□□ -1.3
NPIPB3-209ENST00000538439 H0Y8G0 127 aa6.9□□□□□ -1.3
NPIPB3-209ENST00000538439 C3orf79P0CE67 100 aa6.9□□□□□ -1.3
NPIPB3-209ENST00000538439 MRPS36P82909 103 aaKnown RBP6.9□□□□□ -1.3
NPIPB3-209ENST00000538439 ZFAND6Q6FIF0 208 aa6.9□□□□□ -1.3
NPIPB3-209ENST00000538439 PLECQ15149 4684 aaKnown RBP6.89□□□□□ -1.31
NPIPB3-209ENST00000538439 IGLV4-3A0A075B6K6 122 aa6.89□□□□□ -1.31
NPIPB3-209ENST00000538439 C20orf202A1L168 122 aa6.89□□□□□ -1.31
NPIPB3-209ENST00000538439 SYS1-DBNDD2H3BUS1 97 aa6.89□□□□□ -1.31
NPIPB3-209ENST00000538439 RBX1P62877 108 aa6.89□□□□□ -1.31
NPIPB3-209ENST00000538439 PMVKQ15126 192 aa6.89□□□□□ -1.31
NPIPB3-209ENST00000538439 PET117Q6UWS5 81 aa6.89□□□□□ -1.31
NPIPB3-209ENST00000538439 TEX43Q6ZNM6 134 aa6.89□□□□□ -1.31
NPIPB3-209ENST00000538439 UBE2DNLQ8IWF7 75 aa6.89□□□□□ -1.31
NPIPB3-209ENST00000538439 BAALCQ8WXS3 180 aa6.89□□□□□ -1.31
NPIPB3-209ENST00000538439 MRPS16Q9Y3D3 137 aaKnown RBP6.89□□□□□ -1.31
NPIPB3-209ENST00000538439 TRAV12-1A0A0B4J245 112 aa6.88□□□□□ -1.31
NPIPB3-209ENST00000538439 Q6ZUT4 128 aa6.88□□□□□ -1.31
NPIPB3-209ENST00000538439 SPATA12Q7Z6I5 190 aa6.88□□□□□ -1.31
NPIPB3-209ENST00000538439 ZNF664Q8N3J9 261 aa6.88□□□□□ -1.31
NPIPB3-209ENST00000538439 OPRPNQ99935 248 aaPredicted RBP6.88□□□□□ -1.31
NPIPB3-209ENST00000538439 C2orf88Q9BSF0 95 aa6.88□□□□□ -1.31
NPIPB3-209ENST00000538439 CDC42SE2Q9NRR3 84 aa6.88□□□□□ -1.31
NPIPB3-209ENST00000538439 LINC00588Q9Y4M8 146 aa6.88□□□□□ -1.31
NPIPB3-209ENST00000538439 IGLV4-60A0A075B6I1 120 aa6.87□□□□□ -1.31
NPIPB3-209ENST00000538439 ANGP03950 147 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms