RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 IGLV4-60A0A075B6I1 120 aa5.68□□□□□ -1.5
SMAD3-203ENST00000537194 GAGE12HA6NDE8 117 aa5.68□□□□□ -1.5
SMAD3-203ENST00000537194 K7EN84 100 aa5.68□□□□□ -1.5
SMAD3-203ENST00000537194 PHOX2AO14813 284 aa5.68□□□□□ -1.5
SMAD3-203ENST00000537194 MT1HL1P0DM35 61 aa5.68□□□□□ -1.5
SMAD3-203ENST00000537194 COX6A2Q02221 97 aa5.68□□□□□ -1.5
SMAD3-203ENST00000537194 COX19Q49B96 90 aa5.68□□□□□ -1.5
SMAD3-203ENST00000537194 REG3GQ6UW15 175 aa5.68□□□□□ -1.5
SMAD3-203ENST00000537194 IGKV2-24A0A0C4DH68 120 aa5.67□□□□□ -1.5
SMAD3-203ENST00000537194 LOC105371267A0A1B0GV96 52 aa5.67□□□□□ -1.5
SMAD3-203ENST00000537194 FAM231BA6NCW3 169 aa5.67□□□□□ -1.5
SMAD3-203ENST00000537194 CHTF8P0CG12 524 aa5.67□□□□□ -1.5
SMAD3-203ENST00000537194 RNASEKQ6P5S7 137 aaKnown RBP5.67□□□□□ -1.5
SMAD3-203ENST00000537194 V9GYV3 84 aa5.67□□□□□ -1.5
SMAD3-203ENST00000537194 IGLC6P0CF74 106 aa5.66□□□□□ -1.5
SMAD3-203ENST00000537194 NTF3P20783 257 aa5.66□□□□□ -1.5
SMAD3-203ENST00000537194 TWIST1Q15672 202 aa5.66□□□□□ -1.5
SMAD3-203ENST00000537194 HIGD2BQ4VC39 106 aa5.66□□□□□ -1.5
SMAD3-203ENST00000537194 STPG4Q8N801 248 aa5.66□□□□□ -1.5
SMAD3-203ENST00000537194 TMEM101Q96IK0 257 aa5.66□□□□□ -1.5
SMAD3-203ENST00000537194 TGIF2-C20orf24A0A0A6YYL0 155 aa5.65□□□□□ -1.5
SMAD3-203ENST00000537194 SMIM27A0A1W2PRY6 76 aa5.65□□□□□ -1.5
SMAD3-203ENST00000537194 C19orf71A6NCJ1 209 aa5.65□□□□□ -1.5
SMAD3-203ENST00000537194 H7C423 109 aa5.65□□□□□ -1.5
SMAD3-203ENST00000537194 NCR2O95944 276 aa5.65□□□□□ -1.5
SMAD3-203ENST00000537194 APCSP02743 223 aa5.65□□□□□ -1.5
SMAD3-203ENST00000537194 MT-ND6P03923 174 aa5.65□□□□□ -1.5
SMAD3-203ENST00000537194 LYZL1Q6UWQ5 148 aa5.65□□□□□ -1.5
SMAD3-203ENST00000537194 CHCHD10Q8WYQ3 142 aaPredicted RBP5.65□□□□□ -1.5
SMAD3-203ENST00000537194 LINC01600Q96MT4 127 aa5.65□□□□□ -1.5
SMAD3-203ENST00000537194 GFRA4Q9GZZ7 299 aa5.65□□□□□ -1.5
SMAD3-203ENST00000537194 SLPIP03973 132 aa5.64□□□□□ -1.51
SMAD3-203ENST00000537194 PRR3P79522 188 aaKnown RBP5.64□□□□□ -1.51
SMAD3-203ENST00000537194 ATP5L2Q7Z4Y8 100 aa5.64□□□□□ -1.51
SMAD3-203ENST00000537194 C15orf56Q8N910 161 aa5.64□□□□□ -1.51
SMAD3-203ENST00000537194 PRSS3P2Q8NHM4 247 aa5.64□□□□□ -1.51
SMAD3-203ENST00000537194 GVQW2A0A096LPI5 108 aaPredicted RBP5.63□□□□□ -1.51
SMAD3-203ENST00000537194 C5orf52A6NGY3 159 aa5.63□□□□□ -1.51
SMAD3-203ENST00000537194 ZNF561-AS1K7EIQ3 104 aa5.63□□□□□ -1.51
SMAD3-203ENST00000537194 S100A6P06703 90 aa5.63□□□□□ -1.51
SMAD3-203ENST00000537194 ZNF25P17030 456 aaPredicted RBP5.63□□□□□ -1.51
SMAD3-203ENST00000537194 PMCHP20382 165 aa5.63□□□□□ -1.51
SMAD3-203ENST00000537194 COA6Q5JTJ3 125 aaKnown RBP5.63□□□□□ -1.51
SMAD3-203ENST00000537194 SPINK6Q6UWN8 80 aa5.63□□□□□ -1.51
SMAD3-203ENST00000537194 Q6ZRP5 223 aa5.63□□□□□ -1.51
SMAD3-203ENST00000537194 TSKUQ8WUA8 353 aa5.63□□□□□ -1.51
SMAD3-203ENST00000537194 GNB1LQ9BYB4 327 aa5.63□□□□□ -1.51
SMAD3-203ENST00000537194 RPP21Q9H633 154 aaKnown RBP5.63□□□□□ -1.51
SMAD3-203ENST00000537194 IGHV1-58A0A0C4DH39 117 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 A8MWL6 223 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 GATCO43716 136 aaKnown RBP5.62□□□□□ -1.51
SMAD3-203ENST00000537194 HIST1H2BKO60814 126 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 TRGC2P03986 189 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 HIST1H2BJP06899 126 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 FGF6P10767 208 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 HIST1H2BOP23527 126 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 HIST1H2BBP33778 126 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 FOXA3P55318 350 aaPredicted RBP5.62□□□□□ -1.51
SMAD3-203ENST00000537194 HIST1H2BDP58876 126 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 HIST1H2BCP62807 126 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 SMAGPQ0VAQ4 97 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 SS18Q15532 418 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 HIST2H2BEQ16778 126 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.62□□□□□ -1.51
SMAD3-203ENST00000537194 NUDT10Q8NFP7 164 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 OR5A1Q8NGJ0 315 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 HIST1H2BHQ93079 126 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 BORCS7Q96B45 105 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 NUDT11Q96G61 164 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 CARD19Q96LW7 228 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 HIST1H2BNQ99877 126 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 HIST1H2BMQ99879 126 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 RNASE7Q9H1E1 156 aaKnown RBP5.62□□□□□ -1.51
SMAD3-203ENST00000537194 NAT8BQ9UHF3 227 aa5.62□□□□□ -1.51
SMAD3-203ENST00000537194 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.61□□□□□ -1.51
SMAD3-203ENST00000537194 A0A0J9YXV3 536 aa5.61□□□□□ -1.51
SMAD3-203ENST00000537194 IGKV2-29A2NJV5 120 aaPredicted RBP5.61□□□□□ -1.51
SMAD3-203ENST00000537194 I3L3M4 83 aa5.61□□□□□ -1.51
SMAD3-203ENST00000537194 S100A8P05109 93 aa5.61□□□□□ -1.51
SMAD3-203ENST00000537194 CTRLP40313 264 aa5.61□□□□□ -1.51
SMAD3-203ENST00000537194 XCL1P47992 114 aa5.61□□□□□ -1.51
SMAD3-203ENST00000537194 GATD1Q8NB37 220 aa5.61□□□□□ -1.51
SMAD3-203ENST00000537194 A0A096LNI7 61 aa5.6□□□□□ -1.51
SMAD3-203ENST00000537194 TRAV26-2A0A0B4J265 109 aa5.6□□□□□ -1.51
SMAD3-203ENST00000537194 A0A1B0GW15 77 aa5.6□□□□□ -1.51
SMAD3-203ENST00000537194 A0A1B0GXF2 115 aa5.6□□□□□ -1.51
SMAD3-203ENST00000537194 SDHAF1A6NFY7 115 aa5.6□□□□□ -1.51
SMAD3-203ENST00000537194 MALP21145 153 aa5.6□□□□□ -1.51
SMAD3-203ENST00000537194 SYCNQ0VAF6 134 aa5.6□□□□□ -1.51
SMAD3-203ENST00000537194 MRAP2Q96G30 205 aa5.6□□□□□ -1.51
SMAD3-203ENST00000537194 LOC107984640A0A0U1RRK4 108 aa5.59□□□□□ -1.51
SMAD3-203ENST00000537194 LINC00959A0A1B0GUT2 108 aa5.59□□□□□ -1.51
SMAD3-203ENST00000537194 HIGD1CA8MV81 97 aa5.59□□□□□ -1.51
SMAD3-203ENST00000537194 CCL25O15444 150 aa5.59□□□□□ -1.51
SMAD3-203ENST00000537194 FOXI1Q12951 378 aa5.59□□□□□ -1.51
SMAD3-203ENST00000537194 ODF1Q14990 250 aa5.59□□□□□ -1.51
SMAD3-203ENST00000537194 RPL39LQ96EH5 51 aaKnown RBP5.59□□□□□ -1.51
SMAD3-203ENST00000537194 CNFNQ9BYD5 112 aa5.59□□□□□ -1.51
SMAD3-203ENST00000537194 ST20Q9HBF5 79 aa5.59□□□□□ -1.51
SMAD3-203ENST00000537194 HBBP68871 147 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms