RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 DAND5Q8N907 189 aa10.3□□□□□ -0.76
LIG1-203ENST00000536218 TIMM17AQ99595 171 aa10.3□□□□□ -0.76
LIG1-203ENST00000536218 DAZ1Q9NQZ3 744 aaKnown RBP10.3□□□□□ -0.76
LIG1-203ENST00000536218 ITPR3Q14573 2671 aa10.3□□□□□ -0.76
LIG1-203ENST00000536218 CFHR3Q02985 330 aa10.3□□□□□ -0.76
LIG1-203ENST00000536218 FAM74A4Q5TZK3 123 aa10.3□□□□□ -0.76
LIG1-203ENST00000536218 C2orf48Q96LS8 159 aa10.3□□□□□ -0.76
LIG1-203ENST00000536218 VCYO14598 125 aa10.29□□□□□ -0.76
LIG1-203ENST00000536218 ATP5G1P05496 136 aa10.29□□□□□ -0.76
LIG1-203ENST00000536218 PSMB8P28062 276 aa10.29□□□□□ -0.76
LIG1-203ENST00000536218 OXTP01178 125 aa10.29□□□□□ -0.76
LIG1-203ENST00000536218 RNASE4P34096 147 aaKnown RBP10.29□□□□□ -0.76
LIG1-203ENST00000536218 C9orf47Q6ZRZ4 202 aa10.28□□□□□ -0.76
LIG1-203ENST00000536218 FLNAP21333 2647 aaKnown RBP10.28□□□□□ -0.76
LIG1-203ENST00000536218 CR1P17927 2039 aa10.28□□□□□ -0.76
LIG1-203ENST00000536218 IGHV3-30-3P0DP02 117 aa10.28□□□□□ -0.76
LIG1-203ENST00000536218 SDIM1Q6ZPB5 146 aa10.28□□□□□ -0.76
LIG1-203ENST00000536218 TENM4Q6N022 2769 aa10.28□□□□□ -0.76
LIG1-203ENST00000536218 HELZ2Q9BYK8 2649 aaKnown RBP10.28□□□□□ -0.76
LIG1-203ENST00000536218 MTORP42345 2549 aa10.28□□□□□ -0.76
LIG1-203ENST00000536218 ATOX1O00244 68 aa10.28□□□□□ -0.76
LIG1-203ENST00000536218 A8MZ25 164 aa10.27□□□□□ -0.77
LIG1-203ENST00000536218 SYNJ2BPP57105 145 aa10.27□□□□□ -0.77
LIG1-203ENST00000536218 DAZ2Q13117 558 aaKnown RBP10.27□□□□□ -0.77
LIG1-203ENST00000536218 DAZ4Q86SG3 579 aaKnown RBP10.27□□□□□ -0.77
LIG1-203ENST00000536218 TIMM21Q9BVV7 248 aa10.27□□□□□ -0.77
LIG1-203ENST00000536218 DAZ3Q9NR90 486 aaKnown RBP10.27□□□□□ -0.77
LIG1-203ENST00000536218 PEMTQ9UBM1 199 aa10.27□□□□□ -0.77
LIG1-203ENST00000536218 IGKV3-20P01619 116 aa10.27□□□□□ -0.77
LIG1-203ENST00000536218 SUMO4Q6EEV6 95 aa10.26□□□□□ -0.77
LIG1-203ENST00000536218 Q6YL49 198 aa10.26□□□□□ -0.77
LIG1-203ENST00000536218 WFDC11Q8NEX6 87 aa10.26□□□□□ -0.77
LIG1-203ENST00000536218 MRPL53Q96EL3 112 aaKnown RBP10.26□□□□□ -0.77
LIG1-203ENST00000536218 NACAE9PAV3 2078 aa10.26□□□□□ -0.77
LIG1-203ENST00000536218 TRAV21A0A0B4J279 112 aa10.26□□□□□ -0.77
LIG1-203ENST00000536218 SPANXDQ9BXN6 97 aa10.26□□□□□ -0.77
LIG1-203ENST00000536218 NDUFA12Q9UI09 145 aa10.26□□□□□ -0.77
LIG1-203ENST00000536218 IGKV3D-7A0A0C4DH55 119 aa10.26□□□□□ -0.77
LIG1-203ENST00000536218 POLR2KP53803 58 aaKnown RBP10.26□□□□□ -0.77
LIG1-203ENST00000536218 FAM19A4Q96LR4 140 aa10.26□□□□□ -0.77
LIG1-203ENST00000536218 WNK1Q9H4A3 2382 aa10.26□□□□□ -0.77
LIG1-203ENST00000536218 A0A0U1RRA0 63 aa10.25□□□□□ -0.77
LIG1-203ENST00000536218 SOCS3O14543 225 aa10.25□□□□□ -0.77
LIG1-203ENST00000536218 DEFB136Q30KP8 78 aa10.25□□□□□ -0.77
LIG1-203ENST00000536218 KHDC1LQ5JSQ8 128 aa10.25□□□□□ -0.77
LIG1-203ENST00000536218 DCANP1Q8TF63 244 aa10.25□□□□□ -0.77
LIG1-203ENST00000536218 NF1P21359 2839 aa10.25□□□□□ -0.77
LIG1-203ENST00000536218 RNASE13Q5GAN3 156 aaKnown RBP10.25□□□□□ -0.77
LIG1-203ENST00000536218 TMEM61Q8N0U2 210 aa10.25□□□□□ -0.77
LIG1-203ENST00000536218 LITAFQ99732 161 aa10.25□□□□□ -0.77
LIG1-203ENST00000536218 TMEM258P61165 79 aa10.24□□□□□ -0.77
LIG1-203ENST00000536218 C18orf65Q6ZTR6 163 aa10.24□□□□□ -0.77
LIG1-203ENST00000536218 C5orf38Q86SI9 138 aa10.24□□□□□ -0.77
LIG1-203ENST00000536218 LINC00477Q96M19 166 aa10.24□□□□□ -0.77
LIG1-203ENST00000536218 ZNF702PQ9H963 129 aa10.24□□□□□ -0.77
LIG1-203ENST00000536218 ITPR2Q14571 2701 aa10.24□□□□□ -0.77
LIG1-203ENST00000536218 IGHV4OR15-8A0A075B7B6 117 aa10.24□□□□□ -0.77
LIG1-203ENST00000536218 A0A087WW49 117 aa10.24□□□□□ -0.77
LIG1-203ENST00000536218 ZFAND2AQ8N6M9 145 aa10.24□□□□□ -0.77
LIG1-203ENST00000536218 BAALC-AS2P0C853 105 aa10.23□□□□□ -0.77
LIG1-203ENST00000536218 TIRAPP58753 221 aa10.23□□□□□ -0.77
LIG1-203ENST00000536218 MIAQ16674 131 aa10.23□□□□□ -0.77
LIG1-203ENST00000536218 SPANXCQ9NY87 97 aa10.23□□□□□ -0.77
LIG1-203ENST00000536218 A0A087WVE0 104 aa10.22□□□□□ -0.77
LIG1-203ENST00000536218 NXPH4O95158 308 aa10.22□□□□□ -0.77
LIG1-203ENST00000536218 CXCL5P42830 114 aa10.22□□□□□ -0.77
LIG1-203ENST00000536218 FSHBP01225 129 aa10.22□□□□□ -0.77
LIG1-203ENST00000536218 RNASE3P12724 160 aaKnown RBP10.22□□□□□ -0.77
LIG1-203ENST00000536218 Q5XG85 94 aa10.22□□□□□ -0.77
LIG1-203ENST00000536218 KRTAP1-3Q8IUG1 177 aa10.22□□□□□ -0.77
LIG1-203ENST00000536218 A0A0J9YX75 114 aa10.21□□□□□ -0.77
LIG1-203ENST00000536218 RPL18AQ02543 176 aaKnown RBP10.21□□□□□ -0.77
LIG1-203ENST00000536218 C11orf44Q8N8P7 122 aa10.21□□□□□ -0.77
LIG1-203ENST00000536218 C1orf43Q9BWL3 253 aa10.21□□□□□ -0.77
LIG1-203ENST00000536218 HOXD3P31249 432 aaPredicted RBP10.21□□□□□ -0.78
LIG1-203ENST00000536218 PYGO1Q9Y3Y4 419 aa10.21□□□□□ -0.78
LIG1-203ENST00000536218 LINC00315P59091 139 aa10.2□□□□□ -0.78
LIG1-203ENST00000536218 K7EMT4 169 aa10.2□□□□□ -0.78
LIG1-203ENST00000536218 SLURP1P55000 103 aa10.2□□□□□ -0.78
LIG1-203ENST00000536218 TRAV12-2A0A075B6T6 113 aa10.19□□□□□ -0.78
LIG1-203ENST00000536218 CD28P10747 220 aa10.19□□□□□ -0.78
LIG1-203ENST00000536218 SERP2Q8N6R1 65 aa10.19□□□□□ -0.78
LIG1-203ENST00000536218 MRAPQ8TCY5 172 aa10.19□□□□□ -0.78
LIG1-203ENST00000536218 ZNF625Q96I27 306 aaPredicted RBP10.19□□□□□ -0.78
LIG1-203ENST00000536218 CITED2Q99967 270 aaPredicted RBP10.19□□□□□ -0.78
LIG1-203ENST00000536218 LENEPQ9Y5L5 61 aa10.18□□□□□ -0.78
LIG1-203ENST00000536218 KIF25-AS1Q9Y6Z4 181 aa10.18□□□□□ -0.78
LIG1-203ENST00000536218 IGLV4-3A0A075B6K6 122 aa10.18□□□□□ -0.78
LIG1-203ENST00000536218 Q9HAA7 133 aa10.18□□□□□ -0.78
LIG1-203ENST00000536218 TRBV27A0A0K0K1C4 114 aa10.18□□□□□ -0.78
LIG1-203ENST00000536218 PKIGQ9Y2B9 76 aa10.18□□□□□ -0.78
LIG1-203ENST00000536218 FASNP49327 2511 aaKnown RBP10.18□□□□□ -0.78
LIG1-203ENST00000536218 UBE2E2Q96LR5 201 aa10.17□□□□□ -0.78
LIG1-203ENST00000536218 HECTD1Q9ULT8 2610 aa10.17□□□□□ -0.78
LIG1-203ENST00000536218 MUC4Q99102 2169 aa10.17□□□□□ -0.78
LIG1-203ENST00000536218 COX7A2LO14548 114 aa10.17□□□□□ -0.78
LIG1-203ENST00000536218 DNAL4O96015 105 aa10.17□□□□□ -0.78
LIG1-203ENST00000536218 SNRPD3P62318 126 aaKnown RBP10.16□□□□□ -0.78
LIG1-203ENST00000536218 C20orf203Q8NBC4 194 aa10.16□□□□□ -0.78
LIG1-203ENST00000536218 IGHV1-58A0A0C4DH39 117 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms