RNA–Protein interactions for RNA: ENST00000536000.1

VPS37C-203, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-203ENST00000536000 PRELID3AQ96N28 172 aa8.32□□□□□ -1.08
VPS37C-203ENST00000536000 IMMP2LQ96T52 175 aa8.32□□□□□ -1.08
VPS37C-203ENST00000536000 CDC42SE2Q9NRR3 84 aa8.32□□□□□ -1.08
VPS37C-203ENST00000536000 FAM30AQ9NZY2 134 aa8.32□□□□□ -1.08
VPS37C-203ENST00000536000 LINC01620Q4KN68 170 aa8.31□□□□□ -1.08
VPS37C-203ENST00000536000 CFAP161Q6P656 301 aa8.31□□□□□ -1.08
VPS37C-203ENST00000536000 ZNF664Q8N3J9 261 aa8.31□□□□□ -1.08
VPS37C-203ENST00000536000 CHCHD10Q8WYQ3 142 aaPredicted RBP8.31□□□□□ -1.08
VPS37C-203ENST00000536000 SMIM2Q9BVW6 85 aa8.31□□□□□ -1.08
VPS37C-203ENST00000536000 KRTAP17-1Q9BYP8 105 aa8.31□□□□□ -1.08
VPS37C-203ENST00000536000 KRTAP4-5Q9BYR2 181 aa8.31□□□□□ -1.08
VPS37C-203ENST00000536000 LINC00959A0A1B0GUT2 108 aa8.3□□□□□ -1.08
VPS37C-203ENST00000536000 SS18Q15532 418 aa8.3□□□□□ -1.08
VPS37C-203ENST00000536000 AP5S1Q9NUS5 200 aa8.3□□□□□ -1.08
VPS37C-203ENST00000536000 CSDC2Q9Y534 153 aaKnown RBP8.3□□□□□ -1.08
VPS37C-203ENST00000536000 DNAH5Q8TE73 4624 aa8.3□□□□□ -1.08
VPS37C-203ENST00000536000 RYR1P21817 5038 aa8.29□□□□□ -1.08
VPS37C-203ENST00000536000 hDV102S1A0JD36 115 aa8.29□□□□□ -1.08
VPS37C-203ENST00000536000 RAB5AP20339 215 aa8.29□□□□□ -1.08
VPS37C-203ENST00000536000 LAMTOR2Q9Y2Q5 125 aa8.29□□□□□ -1.08
VPS37C-203ENST00000536000 EPM2AB3EWF7 344 aa8.28□□□□□ -1.08
VPS37C-203ENST00000536000 SMR3BP02814 79 aaPredicted RBP8.28□□□□□ -1.08
VPS37C-203ENST00000536000 S100PP25815 95 aa8.28□□□□□ -1.08
VPS37C-203ENST00000536000 HAMPP81172 84 aa8.28□□□□□ -1.08
VPS37C-203ENST00000536000 TIMM21Q9BVV7 248 aa8.28□□□□□ -1.08
VPS37C-203ENST00000536000 UBE2D4Q9Y2X8 147 aa8.28□□□□□ -1.08
VPS37C-203ENST00000536000 TRAV9-1A0A075B6T8 112 aa8.27□□□□□ -1.09
VPS37C-203ENST00000536000 LOC389332A0A1B0GUA5 103 aa8.27□□□□□ -1.09
VPS37C-203ENST00000536000 PRSS47A8MTI9 375 aa8.27□□□□□ -1.09
VPS37C-203ENST00000536000 CCL25O15444 150 aa8.27□□□□□ -1.09
VPS37C-203ENST00000536000 XCL1P47992 114 aa8.27□□□□□ -1.09
VPS37C-203ENST00000536000 C10orf91Q5T1B1 145 aa8.27□□□□□ -1.09
VPS37C-203ENST00000536000 Q6ZSA8 131 aa8.27□□□□□ -1.09
VPS37C-203ENST00000536000 C9orf163Q8N9P6 203 aa8.27□□□□□ -1.09
VPS37C-203ENST00000536000 MAP1LC3AQ9H492 121 aa8.27□□□□□ -1.09
VPS37C-203ENST00000536000 C1orf196B1AJZ1 125 aa8.26□□□□□ -1.09
VPS37C-203ENST00000536000 RPL39P62891 51 aaKnown RBP8.26□□□□□ -1.09
VPS37C-203ENST00000536000 FOXI1Q12951 378 aa8.26□□□□□ -1.09
VPS37C-203ENST00000536000 RPS10P5Q9NQ39 176 aa8.26□□□□□ -1.09
VPS37C-203ENST00000536000 CARHSP1Q9Y2V2 147 aaKnown RBP8.26□□□□□ -1.09
VPS37C-203ENST00000536000 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.25□□□□□ -1.09
VPS37C-203ENST00000536000 FAM229AH3BQW9 127 aa8.25□□□□□ -1.09
VPS37C-203ENST00000536000 RNASE13Q5GAN3 156 aaKnown RBP8.25□□□□□ -1.09
VPS37C-203ENST00000536000 CD164L2Q6UWJ8 174 aa8.25□□□□□ -1.09
VPS37C-203ENST00000536000 C15orf56Q8N910 161 aa8.25□□□□□ -1.09
VPS37C-203ENST00000536000 TRAV13-1A0A0B4J241 112 aa8.24□□□□□ -1.09
VPS37C-203ENST00000536000 CNBPP62633 177 aaKnown RBP8.24□□□□□ -1.09
VPS37C-203ENST00000536000 HIGD2BQ4VC39 106 aa8.24□□□□□ -1.09
VPS37C-203ENST00000536000 Q8N8P6 123 aa8.24□□□□□ -1.09
VPS37C-203ENST00000536000 SPANXA1Q9NS26 97 aa8.24□□□□□ -1.09
VPS37C-203ENST00000536000 HSPG2P98160 4391 aa8.24□□□□□ -1.09
VPS37C-203ENST00000536000 IGHV1-58A0A0C4DH39 117 aa8.23□□□□□ -1.09
VPS37C-203ENST00000536000 SLPIP03973 132 aa8.23□□□□□ -1.09
VPS37C-203ENST00000536000 RHEBQ15382 184 aa8.23□□□□□ -1.09
VPS37C-203ENST00000536000 KIAA1644Q3SXP7 199 aa8.23□□□□□ -1.09
VPS37C-203ENST00000536000 COX19Q49B96 90 aa8.23□□□□□ -1.09
VPS37C-203ENST00000536000 Q5VSD8 79 aa8.23□□□□□ -1.09
VPS37C-203ENST00000536000 Q6ZUT4 128 aa8.23□□□□□ -1.09
VPS37C-203ENST00000536000 CHAC1Q9BUX1 264 aa8.23□□□□□ -1.09
VPS37C-203ENST00000536000 APOBP04114 4563 aaKnown RBP8.23□□□□□ -1.09
VPS37C-203ENST00000536000 APOC3P02656 99 aa8.22□□□□□ -1.09
VPS37C-203ENST00000536000 IFI27P40305 119 aaPredicted RBP8.22□□□□□ -1.09
VPS37C-203ENST00000536000 MRPS36P82909 103 aaKnown RBP8.22□□□□□ -1.09
VPS37C-203ENST00000536000 NDUFA5Q16718 116 aa8.22□□□□□ -1.09
VPS37C-203ENST00000536000 SDIM1Q6ZPB5 146 aa8.22□□□□□ -1.09
VPS37C-203ENST00000536000 OPRPNQ99935 248 aaPredicted RBP8.22□□□□□ -1.09
VPS37C-203ENST00000536000 GNB1LQ9BYB4 327 aa8.22□□□□□ -1.09
VPS37C-203ENST00000536000 IGHV3-64A0A075B6Q5 118 aa8.21□□□□□ -1.1
VPS37C-203ENST00000536000 MALP21145 153 aa8.21□□□□□ -1.1
VPS37C-203ENST00000536000 ORMDL2Q53FV1 153 aa8.21□□□□□ -1.1
VPS37C-203ENST00000536000 SCXQ7RTU7 201 aa8.21□□□□□ -1.1
VPS37C-203ENST00000536000 DPH3Q96FX2 82 aa8.21□□□□□ -1.1
VPS37C-203ENST00000536000 NXT2Q9NPJ8 142 aaKnown RBP8.21□□□□□ -1.1
VPS37C-203ENST00000536000 PYGO1Q9Y3Y4 419 aa8.21□□□□□ -1.1
VPS37C-203ENST00000536000 GVQW2A0A096LPI5 108 aaPredicted RBP8.2□□□□□ -1.1
VPS37C-203ENST00000536000 ZNF561-AS1K7EIQ3 104 aa8.2□□□□□ -1.1
VPS37C-203ENST00000536000 K7EMI3 77 aa8.2□□□□□ -1.1
VPS37C-203ENST00000536000 COX7A2LO14548 114 aa8.2□□□□□ -1.1
VPS37C-203ENST00000536000 CIRBP-AS1Q8TBR5 109 aa8.2□□□□□ -1.1
VPS37C-203ENST00000536000 FAM104AQ969W3 186 aa8.2□□□□□ -1.1
VPS37C-203ENST00000536000 CYSLTR1Q9Y271 337 aa8.2□□□□□ -1.1
VPS37C-203ENST00000536000 SNAPINO95295 136 aa8.19□□□□□ -1.1
VPS37C-203ENST00000536000 G0S2P27469 103 aa8.19□□□□□ -1.1
VPS37C-203ENST00000536000 FABP9Q0Z7S8 132 aa8.19□□□□□ -1.1
VPS37C-203ENST00000536000 C2orf66Q6UXQ4 117 aa8.19□□□□□ -1.1
VPS37C-203ENST00000536000 C5orf38Q86SI9 138 aa8.19□□□□□ -1.1
VPS37C-203ENST00000536000 SVBPQ8N300 66 aa8.19□□□□□ -1.1
VPS37C-203ENST00000536000 PRSS3P2Q8NHM4 247 aa8.19□□□□□ -1.1
VPS37C-203ENST00000536000 IFITM10A6NMD0 228 aa8.18□□□□□ -1.1
VPS37C-203ENST00000536000 APOMO95445 188 aa8.18□□□□□ -1.1
VPS37C-203ENST00000536000 MT-ND6P03923 174 aa8.18□□□□□ -1.1
VPS37C-203ENST00000536000 INAFM2P0DMQ5 153 aa8.18□□□□□ -1.1
VPS37C-203ENST00000536000 LINC00528Q8N1L1 170 aa8.18□□□□□ -1.1
VPS37C-203ENST00000536000 LINC00526Q96FQ7 95 aa8.18□□□□□ -1.1
VPS37C-203ENST00000536000 IGLV4-3A0A075B6K6 122 aa8.17□□□□□ -1.1
VPS37C-203ENST00000536000 PLA2G1BP04054 148 aaKnown RBP8.17□□□□□ -1.1
VPS37C-203ENST00000536000 TMEM141Q96I45 108 aa8.17□□□□□ -1.1
VPS37C-203ENST00000536000 ALKBH7Q9BT30 221 aaPredicted RBP8.17□□□□□ -1.1
VPS37C-203ENST00000536000 MRPL18Q9H0U6 180 aaKnown RBP8.17□□□□□ -1.1
VPS37C-203ENST00000536000 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms