RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 Q6Q795 121 aa5.75□□□□□ -1.49
COL21A1-212ENST00000535941 C11orf44Q8N8P7 122 aa5.75□□□□□ -1.49
COL21A1-212ENST00000535941 NTN5Q8WTR8 489 aaPredicted RBP5.75□□□□□ -1.49
COL21A1-212ENST00000535941 OVOL2Q9BRP0 275 aa5.75□□□□□ -1.49
COL21A1-212ENST00000535941 ZNF815PA8K554 130 aa5.75□□□□□ -1.49
COL21A1-212ENST00000535941 CD7P09564 240 aa5.75□□□□□ -1.49
COL21A1-212ENST00000535941 KHDC1LQ5JSQ8 128 aa5.75□□□□□ -1.49
COL21A1-212ENST00000535941 C9orf153Q5TBE3 101 aa5.75□□□□□ -1.49
COL21A1-212ENST00000535941 PHLDA3Q9Y5J5 127 aa5.75□□□□□ -1.49
COL21A1-212ENST00000535941 ACANP16112 2415 aa5.75□□□□□ -1.49
COL21A1-212ENST00000535941 TRAV26-2A0A0B4J265 109 aa5.75□□□□□ -1.49
COL21A1-212ENST00000535941 H7C2G1 150 aa5.75□□□□□ -1.49
COL21A1-212ENST00000535941 PPP1R17O96001 155 aa5.75□□□□□ -1.49
COL21A1-212ENST00000535941 M0R2P5 195 aa5.74□□□□□ -1.49
COL21A1-212ENST00000535941 DAZ2Q13117 558 aaKnown RBP5.74□□□□□ -1.49
COL21A1-212ENST00000535941 TOMM6Q96B49 74 aa5.74□□□□□ -1.49
COL21A1-212ENST00000535941 JPT2Q9H910 190 aa5.74□□□□□ -1.49
COL21A1-212ENST00000535941 UBE2D3P61077 147 aa5.74□□□□□ -1.49
COL21A1-212ENST00000535941 UBE2D2P62837 147 aa5.74□□□□□ -1.49
COL21A1-212ENST00000535941 EGFEM1PQ0D2K5 195 aa5.74□□□□□ -1.49
COL21A1-212ENST00000535941 NSUN5P1Q3KNT7 163 aa5.74□□□□□ -1.49
COL21A1-212ENST00000535941 C9orf66Q5T8R8 295 aa5.74□□□□□ -1.49
COL21A1-212ENST00000535941 C14orf178Q8N769 122 aaPredicted RBP5.74□□□□□ -1.49
COL21A1-212ENST00000535941 FAM104AQ969W3 186 aa5.74□□□□□ -1.49
COL21A1-212ENST00000535941 TMEM101Q96IK0 257 aa5.74□□□□□ -1.49
COL21A1-212ENST00000535941 J3KT08 172 aa5.73□□□□□ -1.49
COL21A1-212ENST00000535941 RPL35AP18077 110 aaKnown RBP5.73□□□□□ -1.49
COL21A1-212ENST00000535941 SUMO2P61956 95 aaKnown RBP5.73□□□□□ -1.49
COL21A1-212ENST00000535941 Q1RN00 199 aa5.73□□□□□ -1.49
COL21A1-212ENST00000535941 KRTAP24-1Q3LI83 254 aa5.73□□□□□ -1.49
COL21A1-212ENST00000535941 RPL39LQ96EH5 51 aaKnown RBP5.73□□□□□ -1.49
COL21A1-212ENST00000535941 FAM236AA0A1B0GUQ0 79 aa5.73□□□□□ -1.49
COL21A1-212ENST00000535941 FAM236BA0A1B0GV22 79 aa5.73□□□□□ -1.49
COL21A1-212ENST00000535941 A8MZ25 164 aa5.73□□□□□ -1.49
COL21A1-212ENST00000535941 ZNF415Q09FC8 603 aa5.73□□□□□ -1.49
COL21A1-212ENST00000535941 ZNF56Q15929 161 aa5.73□□□□□ -1.49
COL21A1-212ENST00000535941 HERVK_113P63121 156 aa5.73□□□□□ -1.49
COL21A1-212ENST00000535941 PRIMA1Q86XR5 153 aa5.73□□□□□ -1.49
COL21A1-212ENST00000535941 TMEM263Q8WUH6 116 aaKnown RBP5.73□□□□□ -1.49
COL21A1-212ENST00000535941 F8WDY8 70 aa5.72□□□□□ -1.49
COL21A1-212ENST00000535941 PRADC1Q9BSG0 188 aa5.72□□□□□ -1.49
COL21A1-212ENST00000535941 H7C1H1 209 aa5.72□□□□□ -1.49
COL21A1-212ENST00000535941 LAGE3Q14657 143 aa5.72□□□□□ -1.49
COL21A1-212ENST00000535941 TRAV12-1A0A0B4J245 112 aa5.72□□□□□ -1.49
COL21A1-212ENST00000535941 UBE2D1P51668 147 aa5.72□□□□□ -1.49
COL21A1-212ENST00000535941 STHQ8IWL8 128 aa5.72□□□□□ -1.49
COL21A1-212ENST00000535941 KIR2DL5BQ8NHK3 375 aa5.72□□□□□ -1.49
COL21A1-212ENST00000535941 WFDC10AQ9H1F0 79 aa5.72□□□□□ -1.49
COL21A1-212ENST00000535941 HUWE1Q7Z6Z7 4374 aaKnown RBP5.72□□□□□ -1.49
COL21A1-212ENST00000535941 TEX49A0A1B0GTD5 131 aa5.71□□□□□ -1.5
COL21A1-212ENST00000535941 F8VRH5 84 aa5.71□□□□□ -1.5
COL21A1-212ENST00000535941 TSHBP01222 138 aa5.71□□□□□ -1.5
COL21A1-212ENST00000535941 IGKV3-20P01619 116 aa5.71□□□□□ -1.5
COL21A1-212ENST00000535941 IGIPA6NJ69 53 aa5.71□□□□□ -1.5
COL21A1-212ENST00000535941 IGHV3-53P01767 116 aa5.71□□□□□ -1.5
COL21A1-212ENST00000535941 S100A4P26447 101 aaKnown RBP5.71□□□□□ -1.5
COL21A1-212ENST00000535941 SBSPONQ8IVN8 264 aa5.71□□□□□ -1.5
COL21A1-212ENST00000535941 LINC01587Q99440 93 aa5.71□□□□□ -1.5
COL21A1-212ENST00000535941 X6R8D5 127 aa5.71□□□□□ -1.5
COL21A1-212ENST00000535941 CCDC168Q8NDH2 2452 aa5.71□□□□□ -1.5
COL21A1-212ENST00000535941 DNAH7Q8WXX0 4024 aa5.7□□□□□ -1.5
COL21A1-212ENST00000535941 HERVK_113P61574 105 aa5.7□□□□□ -1.5
COL21A1-212ENST00000535941 Q6ZSN1 163 aa5.7□□□□□ -1.5
COL21A1-212ENST00000535941 C16orf74Q96GX8 76 aa5.7□□□□□ -1.5
COL21A1-212ENST00000535941 PRO1854Q9UHT4 67 aa5.7□□□□□ -1.5
COL21A1-212ENST00000535941 PRM2P04554 102 aa5.7□□□□□ -1.5
COL21A1-212ENST00000535941 ORMDL2Q53FV1 153 aa5.7□□□□□ -1.5
COL21A1-212ENST00000535941 NEXN-AS1Q8NBZ9 246 aa5.7□□□□□ -1.5
COL21A1-212ENST00000535941 UBE2WQ96B02 151 aa5.7□□□□□ -1.5
COL21A1-212ENST00000535941 SONP18583 2426 aaKnown RBP5.7□□□□□ -1.5
COL21A1-212ENST00000535941 TLN2Q9Y4G6 2542 aa5.7□□□□□ -1.5
COL21A1-212ENST00000535941 A0A0U1RQV1 116 aa5.7□□□□□ -1.5
COL21A1-212ENST00000535941 PMVKQ15126 192 aa5.7□□□□□ -1.5
COL21A1-212ENST00000535941 RHOHQ15669 191 aa5.7□□□□□ -1.5
COL21A1-212ENST00000535941 PLEKHB2Q96CS7 222 aa5.7□□□□□ -1.5
COL21A1-212ENST00000535941 SCGB3A1Q96QR1 104 aa5.7□□□□□ -1.5
COL21A1-212ENST00000535941 P0DMU3 169 aa5.69□□□□□ -1.5
COL21A1-212ENST00000535941 FAM231AP0DMU4 169 aa5.69□□□□□ -1.5
COL21A1-212ENST00000535941 FAM231CP0DMU5 169 aa5.69□□□□□ -1.5
COL21A1-212ENST00000535941 ZNF876PQ49A33 203 aa5.69□□□□□ -1.5
COL21A1-212ENST00000535941 BAHCC1Q9P281 2608 aa5.69□□□□□ -1.5
COL21A1-212ENST00000535941 TINCRA0A1B0GVN0 87 aa5.69□□□□□ -1.5
COL21A1-212ENST00000535941 HIVEP2P31629 2446 aa5.68□□□□□ -1.5
COL21A1-212ENST00000535941 TEP1Q99973 2627 aaKnown RBP5.68□□□□□ -1.5
COL21A1-212ENST00000535941 A0A087WWL8 130 aa5.68□□□□□ -1.5
COL21A1-212ENST00000535941 PF4P02776 101 aa5.68□□□□□ -1.5
COL21A1-212ENST00000535941 ATXN8Q156A1 80 aa5.68□□□□□ -1.5
COL21A1-212ENST00000535941 FAM19A3Q7Z5A8 133 aa5.68□□□□□ -1.5
COL21A1-212ENST00000535941 TIMM17AQ99595 171 aa5.68□□□□□ -1.5
COL21A1-212ENST00000535941 CFC1BP0CG36 223 aa5.68□□□□□ -1.5
COL21A1-212ENST00000535941 CFC1P0CG37 223 aa5.68□□□□□ -1.5
COL21A1-212ENST00000535941 RPL13AP40429 203 aaKnown RBP5.68□□□□□ -1.5
COL21A1-212ENST00000535941 C2orf82Q6UX34 121 aa5.68□□□□□ -1.5
COL21A1-212ENST00000535941 LINC01620Q4KN68 170 aa5.67□□□□□ -1.5
COL21A1-212ENST00000535941 XCL2Q9UBD3 114 aa5.67□□□□□ -1.5
COL21A1-212ENST00000535941 PYGO1Q9Y3Y4 419 aa5.67□□□□□ -1.5
COL21A1-212ENST00000535941 VCYO14598 125 aa5.67□□□□□ -1.5
COL21A1-212ENST00000535941 GAGE2AQ6NT46 116 aa5.67□□□□□ -1.5
COL21A1-212ENST00000535941 C3orf22Q8N5N4 141 aa5.67□□□□□ -1.5
COL21A1-212ENST00000535941 CHCHD7Q9BUK0 85 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms