RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 BPESC1Q9GZL8 116 aa0.45□□□□□ -2.34
PRKDC-205ENST00000535375 RPRMQ9NS64 109 aa0.45□□□□□ -2.34
PRKDC-205ENST00000535375 RIMS1Q86UR5 1692 aaKnown RBP0.44□□□□□ -2.34
PRKDC-205ENST00000535375 PIPP12273 146 aaPredicted RBP0.44□□□□□ -2.34
PRKDC-205ENST00000535375 CBLN1P23435 193 aa0.44□□□□□ -2.34
PRKDC-205ENST00000535375 FAM74A4Q5TZK3 123 aa0.44□□□□□ -2.34
PRKDC-205ENST00000535375 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.44□□□□□ -2.34
PRKDC-205ENST00000535375 SPTSSAQ969W0 71 aa0.44□□□□□ -2.34
PRKDC-205ENST00000535375 LINC00470Q9BZP3 86 aa0.44□□□□□ -2.34
PRKDC-205ENST00000535375 ALKQ9UM73 1620 aa0.44□□□□□ -2.34
PRKDC-205ENST00000535375 NRXN2Q9P2S2 1712 aa0.44□□□□□ -2.34
PRKDC-205ENST00000535375 IBTKQ9P2D0 1353 aaPredicted RBP0.44□□□□□ -2.34
PRKDC-205ENST00000535375 PHIPQ8WWQ0 1821 aa0.43□□□□□ -2.34
PRKDC-205ENST00000535375 VMO1Q7Z5L0 202 aa0.43□□□□□ -2.34
PRKDC-205ENST00000535375 V9GYV3 84 aa0.43□□□□□ -2.34
PRKDC-205ENST00000535375 SSC5DA1L4H1 1573 aa0.43□□□□□ -2.34
PRKDC-205ENST00000535375 NBASA2RRP1 2371 aa0.42□□□□□ -2.34
PRKDC-205ENST00000535375 LRP1Q07954 4544 aaKnown RBP0.42□□□□□ -2.34
PRKDC-205ENST00000535375 TNS1Q9HBL0 1735 aaKnown RBP0.42□□□□□ -2.34
PRKDC-205ENST00000535375 DOPEY2Q9Y3R5 2298 aa0.42□□□□□ -2.34
PRKDC-205ENST00000535375 TRBV7-1A0A0A6YYK4 115 aa0.42□□□□□ -2.34
PRKDC-205ENST00000535375 F2Z2F3 143 aa0.42□□□□□ -2.34
PRKDC-205ENST00000535375 IFNA17P01571 189 aa0.42□□□□□ -2.34
PRKDC-205ENST00000535375 SMIM11BQ8TCY0 68 aa0.42□□□□□ -2.34
PRKDC-205ENST00000535375 FAM107BQ9H098 131 aa0.42□□□□□ -2.34
PRKDC-205ENST00000535375 PROK2Q9HC23 129 aa0.42□□□□□ -2.34
PRKDC-205ENST00000535375 LRP1BQ9NZR2 4599 aa0.42□□□□□ -2.34
PRKDC-205ENST00000535375 ZNF518AQ6AHZ1 1483 aa0.41□□□□□ -2.34
PRKDC-205ENST00000535375 PRKDCP78527 4128 aaKnown RBP0.41□□□□□ -2.34
PRKDC-205ENST00000535375 FAM92AA1XBS5 289 aa0.41□□□□□ -2.34
PRKDC-205ENST00000535375 RPL7L1Q6DKI1 246 aaKnown RBP0.41□□□□□ -2.34
PRKDC-205ENST00000535375 ZNF818PQ6ZRF7 136 aa0.41□□□□□ -2.34
PRKDC-205ENST00000535375 ARL11Q969Q4 196 aa0.41□□□□□ -2.34
PRKDC-205ENST00000535375 PRR15LQ9BU68 103 aa0.41□□□□□ -2.34
PRKDC-205ENST00000535375 SNRNP25Q9BV90 132 aaKnown RBP0.41□□□□□ -2.34
PRKDC-205ENST00000535375 AGPAT4-IT1Q9H0P7 198 aa0.41□□□□□ -2.34
PRKDC-205ENST00000535375 STARD9Q9P2P6 4700 aa0.4□□□□□ -2.35
PRKDC-205ENST00000535375 CLASP1Q7Z460 1538 aa0.4□□□□□ -2.35
PRKDC-205ENST00000535375 A6NIN4 97 aa0.4□□□□□ -2.35
PRKDC-205ENST00000535375 EDDM3BP56851 147 aa0.4□□□□□ -2.35
PRKDC-205ENST00000535375 CCL8P80075 99 aa0.4□□□□□ -2.35
PRKDC-205ENST00000535375 IFT140Q96RY7 1462 aa0.4□□□□□ -2.35
PRKDC-205ENST00000535375 F5P12259 2224 aa0.4□□□□□ -2.35
PRKDC-205ENST00000535375 GNG7O60262 68 aa0.39□□□□□ -2.35
PRKDC-205ENST00000535375 SNCGO76070 127 aa0.39□□□□□ -2.35
PRKDC-205ENST00000535375 HIST1H1DP16402 221 aaKnown RBP0.39□□□□□ -2.35
PRKDC-205ENST00000535375 WFDC6Q9BQY6 131 aa0.39□□□□□ -2.35
PRKDC-205ENST00000535375 SEC11CQ9BY50 192 aa0.39□□□□□ -2.35
PRKDC-205ENST00000535375 TNCP24821 2201 aa0.39□□□□□ -2.35
PRKDC-205ENST00000535375 DMDP11532 3685 aa0.39□□□□□ -2.35
PRKDC-205ENST00000535375 SACSQ9NZJ4 4579 aa0.38□□□□□ -2.35
PRKDC-205ENST00000535375 CFTRP13569 1480 aa0.38□□□□□ -2.35
PRKDC-205ENST00000535375 TRGV1A0A0A0MS02 117 aa0.38□□□□□ -2.35
PRKDC-205ENST00000535375 TRBV10-3A0A0K0K1G6 114 aa0.38□□□□□ -2.35
PRKDC-205ENST00000535375 SPINK6Q6UWN8 80 aa0.38□□□□□ -2.35
PRKDC-205ENST00000535375 SPTSSBQ8NFR3 76 aa0.38□□□□□ -2.35
PRKDC-205ENST00000535375 LSM10Q969L4 123 aaKnown RBP0.38□□□□□ -2.35
PRKDC-205ENST00000535375 TSC22D3Q99576 134 aa0.38□□□□□ -2.35
PRKDC-205ENST00000535375 PDCD10Q9BUL8 212 aa0.38□□□□□ -2.35
PRKDC-205ENST00000535375 RERGLQ9H628 205 aa0.38□□□□□ -2.35
PRKDC-205ENST00000535375 LRP2P98164 4655 aa0.38□□□□□ -2.35
PRKDC-205ENST00000535375 PKHD1P08F94 4074 aa0.38□□□□□ -2.35
PRKDC-205ENST00000535375 PTPRQQ9UMZ3 2332 aa0.38□□□□□ -2.35
PRKDC-205ENST00000535375 LRRC7Q96NW7 1537 aa0.38□□□□□ -2.35
PRKDC-205ENST00000535375 CACNA1EQ15878 2313 aa0.37□□□□□ -2.35
PRKDC-205ENST00000535375 CADP27708 2225 aa0.37□□□□□ -2.35
PRKDC-205ENST00000535375 LAMC3Q9Y6N6 1575 aa0.37□□□□□ -2.35
PRKDC-205ENST00000535375 HECTD4Q9Y4D8 3996 aa0.37□□□□□ -2.35
PRKDC-205ENST00000535375 APOC4-APOC2K7ER74 178 aa0.37□□□□□ -2.35
PRKDC-205ENST00000535375 BTG2P78543 158 aa0.37□□□□□ -2.35
PRKDC-205ENST00000535375 INSL4Q14641 139 aa0.37□□□□□ -2.35
PRKDC-205ENST00000535375 S100A7L2Q5SY68 101 aa0.37□□□□□ -2.35
PRKDC-205ENST00000535375 C1orf54Q8WWF1 131 aa0.37□□□□□ -2.35
PRKDC-205ENST00000535375 CSMD3Q7Z407 3707 aa0.37□□□□□ -2.35
PRKDC-205ENST00000535375 MBD5Q9P267 1494 aa0.36□□□□□ -2.35
PRKDC-205ENST00000535375 PKD1P98161 4303 aa0.36□□□□□ -2.35
PRKDC-205ENST00000535375 PHLPP1O60346 1717 aa0.36□□□□□ -2.35
PRKDC-205ENST00000535375 HSPG2P98160 4391 aa0.36□□□□□ -2.35
PRKDC-205ENST00000535375 SPAARA0A1B0GVQ0 90 aa0.36□□□□□ -2.35
PRKDC-205ENST00000535375 TMEM14DPA8MWL7 114 aa0.36□□□□□ -2.35
PRKDC-205ENST00000535375 ACYP2P14621 99 aa0.36□□□□□ -2.35
PRKDC-205ENST00000535375 Q6AWC8 147 aa0.36□□□□□ -2.35
PRKDC-205ENST00000535375 Q6ZRX8 168 aa0.36□□□□□ -2.35
PRKDC-205ENST00000535375 Q8N8P6 123 aa0.36□□□□□ -2.35
PRKDC-205ENST00000535375 COPS9Q8WXC6 57 aa0.36□□□□□ -2.35
PRKDC-205ENST00000535375 LINC00312Q9Y6C7 94 aa0.36□□□□□ -2.35
PRKDC-205ENST00000535375 SERP1Q9Y6X1 66 aa0.36□□□□□ -2.35
PRKDC-205ENST00000535375 EHBP1L1Q8N3D4 1523 aa0.36□□□□□ -2.35
PRKDC-205ENST00000535375 CASKIN1Q8WXD9 1431 aa0.36□□□□□ -2.35
PRKDC-205ENST00000535375 PXDNQ92626 1479 aa0.35□□□□□ -2.35
PRKDC-205ENST00000535375 SIPA1L3O60292 1781 aaPredicted RBP0.35□□□□□ -2.35
PRKDC-205ENST00000535375 SIX6O95475 246 aa0.35□□□□□ -2.35
PRKDC-205ENST00000535375 APODP05090 189 aa0.35□□□□□ -2.35
PRKDC-205ENST00000535375 Q5VV11 94 aa0.35□□□□□ -2.35
PRKDC-205ENST00000535375 LRRC37A3O60309 1634 aa0.35□□□□□ -2.35
PRKDC-205ENST00000535375 TOP2BQ02880 1626 aa0.35□□□□□ -2.35
PRKDC-205ENST00000535375 ZMYM4Q5VZL5 1548 aa0.34□□□□□ -2.35
PRKDC-205ENST00000535375 PARP14Q460N5 1801 aa0.34□□□□□ -2.35
PRKDC-205ENST00000535375 SYNE1Q8NF91 8797 aaKnown RBP0.34□□□□□ -2.35
PRKDC-205ENST00000535375 MEIG1Q5JSS6 88 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms