RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 UFSP1Q6NVU6 142 aa9.42□□□□□ -0.9
SPG11-203ENST00000535302 LY6LH3BQJ8 138 aa9.42□□□□□ -0.9
SPG11-203ENST00000535302 FAM236DA0A1B0GTK5 79 aa9.42□□□□□ -0.9
SPG11-203ENST00000535302 TMEM89A2RUT3 159 aa9.42□□□□□ -0.9
SPG11-203ENST00000535302 FAM236CP0DP71 79 aa9.42□□□□□ -0.9
SPG11-203ENST00000535302 FBXL19-AS1Q494R0 122 aa9.42□□□□□ -0.9
SPG11-203ENST00000535302 Q6ZSV7 163 aa9.42□□□□□ -0.9
SPG11-203ENST00000535302 C11orf1Q9H5F2 150 aa9.42□□□□□ -0.9
SPG11-203ENST00000535302 KIAA1549LQ6ZVL6 1849 aa9.42□□□□□ -0.9
SPG11-203ENST00000535302 CLUHP3Q96NS8 147 aa9.42□□□□□ -0.9
SPG11-203ENST00000535302 C14orf177Q52M58 125 aa9.41□□□□□ -0.9
SPG11-203ENST00000535302 H3BQ85 93 aa9.41□□□□□ -0.9
SPG11-203ENST00000535302 Q6ZS46 218 aa9.41□□□□□ -0.9
SPG11-203ENST00000535302 NEXN-AS1Q8NBZ9 246 aa9.41□□□□□ -0.9
SPG11-203ENST00000535302 CIRBP-AS1Q8TBR5 109 aa9.41□□□□□ -0.9
SPG11-203ENST00000535302 COA6Q5JTJ3 125 aaKnown RBP9.41□□□□□ -0.9
SPG11-203ENST00000535302 UBE2D2P62837 147 aa9.41□□□□□ -0.9
SPG11-203ENST00000535302 C6orf99Q4VX62 202 aa9.41□□□□□ -0.9
SPG11-203ENST00000535302 INSL3P51460 131 aa9.4□□□□□ -0.9
SPG11-203ENST00000535302 SERP1Q9Y6X1 66 aa9.4□□□□□ -0.9
SPG11-203ENST00000535302 NUP210LQ5VU65 1888 aa9.4□□□□□ -0.9
SPG11-203ENST00000535302 SMR3AQ99954 134 aa9.4□□□□□ -0.9
SPG11-203ENST00000535302 PRR15LQ9BU68 103 aa9.39□□□□□ -0.91
SPG11-203ENST00000535302 CELA1Q9UNI1 258 aa9.39□□□□□ -0.91
SPG11-203ENST00000535302 CRIP3Q6Q6R5 217 aa9.39□□□□□ -0.91
SPG11-203ENST00000535302 SPINK1P00995 79 aa9.39□□□□□ -0.91
SPG11-203ENST00000535302 ZNF295-AS1Q8N0V1 137 aa9.39□□□□□ -0.91
SPG11-203ENST00000535302 MAPKAPK5-AS1Q8N8E1 139 aa9.39□□□□□ -0.91
SPG11-203ENST00000535302 ATG2AQ2TAZ0 1938 aa9.39□□□□□ -0.91
SPG11-203ENST00000535302 Q6ZVQ6 151 aa9.39□□□□□ -0.91
SPG11-203ENST00000535302 PTPRQQ9UMZ3 2332 aa9.38□□□□□ -0.91
SPG11-203ENST00000535302 P0C879 139 aa9.38□□□□□ -0.91
SPG11-203ENST00000535302 K7EQG2 157 aa9.38□□□□□ -0.91
SPG11-203ENST00000535302 TRIAP1O43715 76 aa9.38□□□□□ -0.91
SPG11-203ENST00000535302 CFAP126Q5VTH2 177 aa9.38□□□□□ -0.91
SPG11-203ENST00000535302 CRIP1P50238 77 aa9.37□□□□□ -0.91
SPG11-203ENST00000535302 PRRC2AP48634 2157 aaKnown RBP9.37□□□□□ -0.91
SPG11-203ENST00000535302 NDUFC2-KCTD14E9PQ53 114 aa9.37□□□□□ -0.91
SPG11-203ENST00000535302 KIR2DL5BQ8NHK3 375 aa9.37□□□□□ -0.91
SPG11-203ENST00000535302 TECTAO75443 2155 aa9.37□□□□□ -0.91
SPG11-203ENST00000535302 CDSNQ15517 529 aa9.37□□□□□ -0.91
SPG11-203ENST00000535302 LINC00643Q86TS7 51 aa9.37□□□□□ -0.91
SPG11-203ENST00000535302 EML5Q05BV3 1969 aa9.37□□□□□ -0.91
SPG11-203ENST00000535302 TRBV6-5A0A0K0K1A5 114 aa9.37□□□□□ -0.91
SPG11-203ENST00000535302 IGLV2-11P01706 119 aa9.37□□□□□ -0.91
SPG11-203ENST00000535302 HIGD1BQ9P298 99 aa9.37□□□□□ -0.91
SPG11-203ENST00000535302 CEP192Q8TEP8 1941 aa9.37□□□□□ -0.91
SPG11-203ENST00000535302 PLAC8L1A1L4L8 177 aa9.36□□□□□ -0.91
SPG11-203ENST00000535302 H3BT86 120 aa9.36□□□□□ -0.91
SPG11-203ENST00000535302 SPANXCQ9NY87 97 aa9.36□□□□□ -0.91
SPG11-203ENST00000535302 EDN2P20800 178 aa9.36□□□□□ -0.91
SPG11-203ENST00000535302 CREBBPQ92793 2442 aa9.36□□□□□ -0.91
SPG11-203ENST00000535302 FAM240AA0A1B0GVK7 77 aa9.36□□□□□ -0.91
SPG11-203ENST00000535302 LRRC75A-AS1Q8N1F1 130 aa9.36□□□□□ -0.91
SPG11-203ENST00000535302 A0A1B0GXF2 115 aa9.35□□□□□ -0.91
SPG11-203ENST00000535302 IGLV4-3A0A075B6K6 122 aa9.35□□□□□ -0.91
SPG11-203ENST00000535302 DEFB116Q30KQ4 102 aa9.35□□□□□ -0.91
SPG11-203ENST00000535302 TRBV27A0A0K0K1C4 114 aa9.35□□□□□ -0.91
SPG11-203ENST00000535302 TRBV6-8A0A0A6YYG3 113 aa9.34□□□□□ -0.91
SPG11-203ENST00000535302 FAM208BQ5VWN6 2430 aa9.34□□□□□ -0.91
SPG11-203ENST00000535302 TMEM223A0PJW6 202 aa9.34□□□□□ -0.91
SPG11-203ENST00000535302 SYCNQ0VAF6 134 aa9.34□□□□□ -0.91
SPG11-203ENST00000535302 IL17DQ8TAD2 202 aa9.34□□□□□ -0.91
SPG11-203ENST00000535302 ZNF702PQ9H963 129 aa9.34□□□□□ -0.91
SPG11-203ENST00000535302 COL4A4P53420 1690 aaPredicted RBP9.34□□□□□ -0.91
SPG11-203ENST00000535302 OTOGLQ3ZCN5 2332 aa9.34□□□□□ -0.91
SPG11-203ENST00000535302 RAI1Q7Z5J4 1906 aaPredicted RBP9.34□□□□□ -0.91
SPG11-203ENST00000535302 OXLD1Q5BKU9 147 aa9.34□□□□□ -0.91
SPG11-203ENST00000535302 KPRPQ5T749 579 aaPredicted RBP9.34□□□□□ -0.91
SPG11-203ENST00000535302 C11orf71Q6IPW1 123 aa9.34□□□□□ -0.91
SPG11-203ENST00000535302 LINC00308Q8TCZ7 52 aa9.34□□□□□ -0.91
SPG11-203ENST00000535302 MRPS12O15235 138 aaKnown RBP9.33□□□□□ -0.92
SPG11-203ENST00000535302 MUC6Q6W4X9 2439 aa9.33□□□□□ -0.92
SPG11-203ENST00000535302 LYRM9A8MSI8 78 aa9.33□□□□□ -0.92
SPG11-203ENST00000535302 PRR9Q5T870 116 aa9.33□□□□□ -0.92
SPG11-203ENST00000535302 SOSTDC1Q6X4U4 206 aa9.33□□□□□ -0.92
SPG11-203ENST00000535302 Q6ZQY7 126 aa9.32□□□□□ -0.92
SPG11-203ENST00000535302 EIF4EBP1Q13541 118 aaPredicted RBP9.32□□□□□ -0.92
SPG11-203ENST00000535302 ZNF22P17026 224 aaPredicted RBP9.32□□□□□ -0.92
SPG11-203ENST00000535302 NDUFA7O95182 113 aa9.32□□□□□ -0.92
SPG11-203ENST00000535302 C9orf116Q5BN46 136 aaPredicted RBP9.31□□□□□ -0.92
SPG11-203ENST00000535302 SPG11Q96JI7 2443 aa9.31□□□□□ -0.92
SPG11-203ENST00000535302 Q6Q795 121 aa9.31□□□□□ -0.92
SPG11-203ENST00000535302 ESRGQ1W209 222 aa9.31□□□□□ -0.92
SPG11-203ENST00000535302 SERP2Q8N6R1 65 aa9.31□□□□□ -0.92
SPG11-203ENST00000535302 M0QY20 66 aa9.31□□□□□ -0.92
SPG11-203ENST00000535302 Q8N9L7 120 aa9.31□□□□□ -0.92
SPG11-203ENST00000535302 TIMM17BO60830 172 aa9.3□□□□□ -0.92
SPG11-203ENST00000535302 SMIM11BQ8TCY0 68 aa9.3□□□□□ -0.92
SPG11-203ENST00000535302 RNF185Q96GF1 192 aa9.3□□□□□ -0.92
SPG11-203ENST00000535302 LINC00574Q9H8X3 128 aa9.3□□□□□ -0.92
SPG11-203ENST00000535302 LTBP2Q14767 1821 aa9.3□□□□□ -0.92
SPG11-203ENST00000535302 PRR3P79522 188 aaKnown RBP9.3□□□□□ -0.92
SPG11-203ENST00000535302 LINC01006Q8NI28 216 aa9.3□□□□□ -0.92
SPG11-203ENST00000535302 GAS8-AS1O95177 125 aa9.29□□□□□ -0.92
SPG11-203ENST00000535302 MBD6Q96DN6 1003 aa9.29□□□□□ -0.92
SPG11-203ENST00000535302 PCOTHQ58A44 107 aa9.29□□□□□ -0.92
SPG11-203ENST00000535302 CSPG4Q6UVK1 2322 aa9.29□□□□□ -0.92
SPG11-203ENST00000535302 ALPK3Q96L96 1907 aa9.29□□□□□ -0.92
SPG11-203ENST00000535302 PDE6GP18545 87 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms