RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 RNASEKQ6P5S7 137 aaKnown RBP6.36□□□□□ -1.39
CLSTN3-203ENST00000534830 MRPL52Q86TS9 123 aaKnown RBP6.36□□□□□ -1.39
CLSTN3-203ENST00000534830 ST20Q9HBF5 79 aa6.36□□□□□ -1.39
CLSTN3-203ENST00000534830 PLAC8Q9NZF1 115 aa6.36□□□□□ -1.39
CLSTN3-203ENST00000534830 LINC00959A0A1B0GUT2 108 aa6.35□□□□□ -1.39
CLSTN3-203ENST00000534830 AMN1Q8IY45 258 aa6.35□□□□□ -1.39
CLSTN3-203ENST00000534830 NUP35Q8NFH5 326 aa6.35□□□□□ -1.39
CLSTN3-203ENST00000534830 ISOC2Q96AB3 205 aa6.35□□□□□ -1.39
CLSTN3-203ENST00000534830 MRAP2Q96G30 205 aa6.35□□□□□ -1.39
CLSTN3-203ENST00000534830 CDC42SE2Q9NRR3 84 aa6.35□□□□□ -1.39
CLSTN3-203ENST00000534830 COX6A2Q02221 97 aa6.34□□□□□ -1.39
CLSTN3-203ENST00000534830 HIGD2BQ4VC39 106 aa6.34□□□□□ -1.39
CLSTN3-203ENST00000534830 NRACQ8N912 160 aa6.34□□□□□ -1.39
CLSTN3-203ENST00000534830 PRSS3P2Q8NHM4 247 aa6.34□□□□□ -1.39
CLSTN3-203ENST00000534830 BORCS7Q96B45 105 aa6.34□□□□□ -1.39
CLSTN3-203ENST00000534830 TMEM242Q9NWH2 141 aa6.34□□□□□ -1.39
CLSTN3-203ENST00000534830 C9JQL5 133 aa6.33□□□□□ -1.4
CLSTN3-203ENST00000534830 RPL23P62829 140 aaKnown RBP6.33□□□□□ -1.4
CLSTN3-203ENST00000534830 ODF1Q14990 250 aa6.33□□□□□ -1.4
CLSTN3-203ENST00000534830 TMEM241Q24JQ0 296 aa6.33□□□□□ -1.4
CLSTN3-203ENST00000534830 FAM74A3Q4VXF1 159 aa6.33□□□□□ -1.4
CLSTN3-203ENST00000534830 TMEM101Q96IK0 257 aa6.33□□□□□ -1.4
CLSTN3-203ENST00000534830 CSDC2Q9Y534 153 aaKnown RBP6.33□□□□□ -1.4
CLSTN3-203ENST00000534830 C7orf77A4D0Y5 90 aa6.32□□□□□ -1.4
CLSTN3-203ENST00000534830 CCL25O15444 150 aa6.32□□□□□ -1.4
CLSTN3-203ENST00000534830 RIGQ13278 110 aa6.32□□□□□ -1.4
CLSTN3-203ENST00000534830 ZNF664Q8N3J9 261 aa6.32□□□□□ -1.4
CLSTN3-203ENST00000534830 BTF3L4Q96K17 158 aa6.32□□□□□ -1.4
CLSTN3-203ENST00000534830 IGHV1-58A0A0C4DH39 117 aa6.31□□□□□ -1.4
CLSTN3-203ENST00000534830 SMIM27A0A1W2PRY6 76 aa6.31□□□□□ -1.4
CLSTN3-203ENST00000534830 SMKR1H3BMG3 65 aa6.31□□□□□ -1.4
CLSTN3-203ENST00000534830 VCYO14598 125 aa6.31□□□□□ -1.4
CLSTN3-203ENST00000534830 PPP1R17O96001 155 aa6.31□□□□□ -1.4
CLSTN3-203ENST00000534830 XCL1P47992 114 aa6.31□□□□□ -1.4
CLSTN3-203ENST00000534830 SUMO2P61956 95 aaKnown RBP6.31□□□□□ -1.4
CLSTN3-203ENST00000534830 SRSF3P84103 164 aaKnown RBP6.31□□□□□ -1.4
CLSTN3-203ENST00000534830 FAM104BQ5XKR9 115 aa6.31□□□□□ -1.4
CLSTN3-203ENST00000534830 CD164L2Q6UWJ8 174 aa6.31□□□□□ -1.4
CLSTN3-203ENST00000534830 DPH3Q96FX2 82 aa6.31□□□□□ -1.4
CLSTN3-203ENST00000534830 NAT8BQ9UHF3 227 aa6.31□□□□□ -1.4
CLSTN3-203ENST00000534830 UBE2D4Q9Y2X8 147 aa6.31□□□□□ -1.4
CLSTN3-203ENST00000534830 TRBV24-1A0A075B6N3 115 aa6.3□□□□□ -1.4
CLSTN3-203ENST00000534830 A0A096LNI7 61 aa6.3□□□□□ -1.4
CLSTN3-203ENST00000534830 PHOX2AO14813 284 aa6.3□□□□□ -1.4
CLSTN3-203ENST00000534830 RPL32P62910 135 aaKnown RBP6.3□□□□□ -1.4
CLSTN3-203ENST00000534830 SS18Q15532 418 aa6.3□□□□□ -1.4
CLSTN3-203ENST00000534830 MAJINQ3KP22 176 aa6.3□□□□□ -1.4
CLSTN3-203ENST00000534830 MRPL51Q4U2R6 128 aaKnown RBP6.3□□□□□ -1.4
CLSTN3-203ENST00000534830 SMDT1Q9H4I9 107 aa6.3□□□□□ -1.4
CLSTN3-203ENST00000534830 NAT8Q9UHE5 227 aa6.3□□□□□ -1.4
CLSTN3-203ENST00000534830 IGKV2-24A0A0C4DH68 120 aa6.29□□□□□ -1.4
CLSTN3-203ENST00000534830 LINC00862A6NCI5 91 aa6.29□□□□□ -1.4
CLSTN3-203ENST00000534830 PPP1R2P9O14990 202 aa6.29□□□□□ -1.4
CLSTN3-203ENST00000534830 STPG4Q8N801 248 aa6.29□□□□□ -1.4
CLSTN3-203ENST00000534830 FAM104AQ969W3 186 aa6.29□□□□□ -1.4
CLSTN3-203ENST00000534830 LINC00526Q96FQ7 95 aa6.29□□□□□ -1.4
CLSTN3-203ENST00000534830 C1orf196B1AJZ1 125 aa6.28□□□□□ -1.4
CLSTN3-203ENST00000534830 ADIRFQ15847 76 aa6.28□□□□□ -1.4
CLSTN3-203ENST00000534830 C7orf33Q8WU49 177 aa6.28□□□□□ -1.4
CLSTN3-203ENST00000534830 CARD19Q96LW7 228 aa6.28□□□□□ -1.4
CLSTN3-203ENST00000534830 KIR2DL4Q99706 377 aa6.28□□□□□ -1.4
CLSTN3-203ENST00000534830 C20orf78Q9BR46 151 aa6.28□□□□□ -1.4
CLSTN3-203ENST00000534830 TIMM21Q9BVV7 248 aa6.28□□□□□ -1.4
CLSTN3-203ENST00000534830 LINC00474Q9P2X8 69 aa6.28□□□□□ -1.4
CLSTN3-203ENST00000534830 A0A1B0GW15 77 aa6.27□□□□□ -1.41
CLSTN3-203ENST00000534830 A0A1B0GXF2 115 aa6.27□□□□□ -1.41
CLSTN3-203ENST00000534830 FCER1GP30273 86 aa6.27□□□□□ -1.41
CLSTN3-203ENST00000534830 PRR3P79522 188 aaKnown RBP6.27□□□□□ -1.41
CLSTN3-203ENST00000534830 PEA15Q15121 130 aa6.27□□□□□ -1.41
CLSTN3-203ENST00000534830 IGLV4-69A0A075B6H9 119 aa6.26□□□□□ -1.41
CLSTN3-203ENST00000534830 ZNF561-AS1K7EIQ3 104 aa6.26□□□□□ -1.41
CLSTN3-203ENST00000534830 CAMPP49913 170 aa6.26□□□□□ -1.41
CLSTN3-203ENST00000534830 SYCNQ0VAF6 134 aa6.26□□□□□ -1.41
CLSTN3-203ENST00000534830 SMAGPQ0VAQ4 97 aa6.26□□□□□ -1.41
CLSTN3-203ENST00000534830 RNASE13Q5GAN3 156 aaKnown RBP6.26□□□□□ -1.41
CLSTN3-203ENST00000534830 PKIGQ9Y2B9 76 aa6.26□□□□□ -1.41
CLSTN3-203ENST00000534830 LPAP08519 4548 aa6.26□□□□□ -1.41
CLSTN3-203ENST00000534830 COX7A2LO14548 114 aa6.25□□□□□ -1.41
CLSTN3-203ENST00000534830 TCAPO15273 167 aa6.25□□□□□ -1.41
CLSTN3-203ENST00000534830 TNFRSF6BO95407 300 aa6.25□□□□□ -1.41
CLSTN3-203ENST00000534830 CKS2P33552 79 aa6.25□□□□□ -1.41
CLSTN3-203ENST00000534830 PTTG1IPP53801 180 aa6.25□□□□□ -1.41
CLSTN3-203ENST00000534830 Q6ZUT4 128 aa6.25□□□□□ -1.41
CLSTN3-203ENST00000534830 TMEM18Q96B42 140 aa6.25□□□□□ -1.41
CLSTN3-203ENST00000534830 LINC01600Q96MT4 127 aa6.25□□□□□ -1.41
CLSTN3-203ENST00000534830 FAT4Q6V0I7 4981 aa6.25□□□□□ -1.41
CLSTN3-203ENST00000534830 TRAV13-1A0A0B4J241 112 aa6.24□□□□□ -1.41
CLSTN3-203ENST00000534830 D6R8Y8 96 aa6.24□□□□□ -1.41
CLSTN3-203ENST00000534830 RPL39P62891 51 aaKnown RBP6.24□□□□□ -1.41
CLSTN3-203ENST00000534830 HBBP68871 147 aa6.24□□□□□ -1.41
CLSTN3-203ENST00000534830 MRPS36P82909 103 aaKnown RBP6.24□□□□□ -1.41
CLSTN3-203ENST00000534830 SRSF9Q13242 221 aaKnown RBP eCLIP6.24□□□□□ -1.41
CLSTN3-203ENST00000534830 C2orf48Q96LS8 159 aa6.24□□□□□ -1.41
CLSTN3-203ENST00000534830 SMIM2Q9BVW6 85 aa6.24□□□□□ -1.41
CLSTN3-203ENST00000534830 IGHV3OR16-9A0A0B4J2B5 98 aa6.23□□□□□ -1.41
CLSTN3-203ENST00000534830 A0A0U1RQV1 116 aa6.23□□□□□ -1.41
CLSTN3-203ENST00000534830 LOC107984640A0A0U1RRK4 108 aa6.23□□□□□ -1.41
CLSTN3-203ENST00000534830 A0A1W2PNN7 141 aa6.23□□□□□ -1.41
CLSTN3-203ENST00000534830 PRSS47A8MTI9 375 aa6.23□□□□□ -1.41
CLSTN3-203ENST00000534830 F8W036 122 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms