RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 DOPEY1Q5JWR5 2465 aa14.03□□□□□ -0.16
SMPD1-210ENST00000534405 PIEZO1Q92508 2521 aa14.03□□□□□ -0.16
SMPD1-210ENST00000534405 NPC2P61916 151 aa14.02□□□□□ -0.16
SMPD1-210ENST00000534405 FAM222AQ5U5X8 452 aa14.02□□□□□ -0.16
SMPD1-210ENST00000534405 C10orf99Q6UWK7 81 aa14.01□□□□□ -0.17
SMPD1-210ENST00000534405 CRYBG3Q68DQ2 2970 aa14.01□□□□□ -0.17
SMPD1-210ENST00000534405 IGHV1-58A0A0C4DH39 117 aa14.01□□□□□ -0.17
SMPD1-210ENST00000534405 TIMM17BO60830 172 aa14.01□□□□□ -0.17
SMPD1-210ENST00000534405 IGLV4-3A0A075B6K6 122 aa14□□□□□ -0.17
SMPD1-210ENST00000534405 BAALC-AS2P0C853 105 aa14□□□□□ -0.17
SMPD1-210ENST00000534405 J3QLI3 93 aa13.99□□□□□ -0.17
SMPD1-210ENST00000534405 UTP20O75691 2785 aaKnown RBP13.99□□□□□ -0.17
SMPD1-210ENST00000534405 TRAV12-3A0A0B4J271 114 aa13.99□□□□□ -0.17
SMPD1-210ENST00000534405 NDUFC2-KCTD14E9PQ53 114 aa13.98□□□□□ -0.17
SMPD1-210ENST00000534405 C20orf203Q8NBC4 194 aa13.98□□□□□ -0.17
SMPD1-210ENST00000534405 KLLNB2CW77 178 aa13.98□□□□□ -0.17
SMPD1-210ENST00000534405 IGHV4-59P01825 116 aa13.98□□□□□ -0.17
SMPD1-210ENST00000534405 MRPS36P82909 103 aaKnown RBP13.98□□□□□ -0.17
SMPD1-210ENST00000534405 Q6JHZ5 121 aa13.98□□□□□ -0.17
SMPD1-210ENST00000534405 IGSF10Q6WRI0 2623 aa13.97□□□□□ -0.17
SMPD1-210ENST00000534405 B4DSR2 109 aa13.97□□□□□ -0.17
SMPD1-210ENST00000534405 SYNJ2BPP57105 145 aa13.97□□□□□ -0.17
SMPD1-210ENST00000534405 PSMB8P28062 276 aa13.96□□□□□ -0.17
SMPD1-210ENST00000534405 PFN2P35080 140 aa13.96□□□□□ -0.17
SMPD1-210ENST00000534405 F5H697 171 aa13.95□□□□□ -0.18
SMPD1-210ENST00000534405 DEFB112Q30KQ8 113 aa13.95□□□□□ -0.18
SMPD1-210ENST00000534405 VSIG2Q96IQ7 327 aa13.95□□□□□ -0.18
SMPD1-210ENST00000534405 K7EMT4 169 aa13.95□□□□□ -0.18
SMPD1-210ENST00000534405 USP17L23D6RBM5 183 aa13.94□□□□□ -0.18
SMPD1-210ENST00000534405 DOPEY2Q9Y3R5 2298 aa13.94□□□□□ -0.18
SMPD1-210ENST00000534405 A0A087WWL8 130 aa13.94□□□□□ -0.18
SMPD1-210ENST00000534405 CACNA1AO00555 2505 aa13.94□□□□□ -0.18
SMPD1-210ENST00000534405 USP9YO00507 2555 aaPredicted RBP13.93□□□□□ -0.18
SMPD1-210ENST00000534405 LINC01561Q8N1V8 128 aa13.93□□□□□ -0.18
SMPD1-210ENST00000534405 EPM2AB3EWF7 344 aa13.93□□□□□ -0.18
SMPD1-210ENST00000534405 NDUFC2O95298 119 aa13.93□□□□□ -0.18
SMPD1-210ENST00000534405 LINC00336Q6ZUF6 198 aa13.93□□□□□ -0.18
SMPD1-210ENST00000534405 FHL2Q14192 279 aa13.92□□□□□ -0.18
SMPD1-210ENST00000534405 TINCRA0A1B0GVN0 87 aa13.92□□□□□ -0.18
SMPD1-210ENST00000534405 ZANQ9Y493 2812 aa13.92□□□□□ -0.18
SMPD1-210ENST00000534405 IGKV3D-7A0A0C4DH55 119 aa13.91□□□□□ -0.18
SMPD1-210ENST00000534405 MAPK1IP1LQ8NDC0 245 aa13.91□□□□□ -0.18
SMPD1-210ENST00000534405 M0QY20 66 aa13.9□□□□□ -0.18
SMPD1-210ENST00000534405 IGKV3-20P01619 116 aa13.9□□□□□ -0.18
SMPD1-210ENST00000534405 POLQO75417 2590 aa13.9□□□□□ -0.18
SMPD1-210ENST00000534405 TRAV12-2A0A075B6T6 113 aa13.9□□□□□ -0.18
SMPD1-210ENST00000534405 A0A087WVE0 104 aa13.9□□□□□ -0.18
SMPD1-210ENST00000534405 Q8N2B8 174 aa13.9□□□□□ -0.18
SMPD1-210ENST00000534405 FAM104AQ969W3 186 aa13.9□□□□□ -0.18
SMPD1-210ENST00000534405 SORL1Q92673 2214 aa13.9□□□□□ -0.19
SMPD1-210ENST00000534405 PRRC2AP48634 2157 aaKnown RBP13.89□□□□□ -0.19
SMPD1-210ENST00000534405 MYO18BQ8IUG5 2567 aa13.89□□□□□ -0.19
SMPD1-210ENST00000534405 A8MZ25 164 aa13.89□□□□□ -0.19
SMPD1-210ENST00000534405 RS1O15537 224 aa13.89□□□□□ -0.19
SMPD1-210ENST00000534405 ZNF415Q09FC8 603 aa13.89□□□□□ -0.19
SMPD1-210ENST00000534405 A0A096LNT2 108 aa13.88□□□□□ -0.19
SMPD1-210ENST00000534405 DNAL4O96015 105 aa13.88□□□□□ -0.19
SMPD1-210ENST00000534405 PRIMA1Q86XR5 153 aa13.88□□□□□ -0.19
SMPD1-210ENST00000534405 LINC00308Q8TCZ7 52 aa13.88□□□□□ -0.19
SMPD1-210ENST00000534405 C1orf43Q9BWL3 253 aa13.88□□□□□ -0.19
SMPD1-210ENST00000534405 FBN2P35556 2912 aa13.88□□□□□ -0.19
SMPD1-210ENST00000534405 C9orf85Q96MD7 179 aa13.88□□□□□ -0.19
SMPD1-210ENST00000534405 FAM218AQ96MZ4 157 aa13.88□□□□□ -0.19
SMPD1-210ENST00000534405 CD28P10747 220 aa13.87□□□□□ -0.19
SMPD1-210ENST00000534405 LINC01356Q8N9X3 169 aa13.86□□□□□ -0.19
SMPD1-210ENST00000534405 IGHV3-16A0A0C4DH30 117 aa13.85□□□□□ -0.19
SMPD1-210ENST00000534405 ACACBO00763 2458 aa13.85□□□□□ -0.19
SMPD1-210ENST00000534405 NDUFA1O15239 70 aa13.85□□□□□ -0.19
SMPD1-210ENST00000534405 ANKRD17O75179 2603 aaKnown RBP13.85□□□□□ -0.19
SMPD1-210ENST00000534405 UBE2D4Q9Y2X8 147 aa13.85□□□□□ -0.19
SMPD1-210ENST00000534405 K7EQG2 157 aa13.85□□□□□ -0.19
SMPD1-210ENST00000534405 LINC00846Q9NV44 126 aa13.85□□□□□ -0.19
SMPD1-210ENST00000534405 CIRBPQ14011 172 aaKnown RBP13.84□□□□□ -0.19
SMPD1-210ENST00000534405 FAM74A4Q5TZK3 123 aa13.84□□□□□ -0.19
SMPD1-210ENST00000534405 RPL35AP18077 110 aaKnown RBP13.84□□□□□ -0.19
SMPD1-210ENST00000534405 DSCR9P59020 149 aa13.84□□□□□ -0.19
SMPD1-210ENST00000534405 SPINK13Q1W4C9 94 aa13.84□□□□□ -0.19
SMPD1-210ENST00000534405 SERP1Q9Y6X1 66 aa13.84□□□□□ -0.19
SMPD1-210ENST00000534405 FAM236DA0A1B0GTK5 79 aa13.83□□□□□ -0.19
SMPD1-210ENST00000534405 FAM236CP0DP71 79 aa13.83□□□□□ -0.19
SMPD1-210ENST00000534405 TMEM86BQ8N661 226 aa13.83□□□□□ -0.19
SMPD1-210ENST00000534405 SNRPD3P62318 126 aaKnown RBP13.82□□□□□ -0.2
SMPD1-210ENST00000534405 FAM208BQ5VWN6 2430 aa13.82□□□□□ -0.2
SMPD1-210ENST00000534405 OBSCN-AS1Q96MR7 158 aa13.82□□□□□ -0.2
SMPD1-210ENST00000534405 TMEM89A2RUT3 159 aa13.81□□□□□ -0.2
SMPD1-210ENST00000534405 COPS9Q8WXC6 57 aa13.81□□□□□ -0.2
SMPD1-210ENST00000534405 TMEM243Q9BU79 118 aa13.81□□□□□ -0.2
SMPD1-210ENST00000534405 CREBBPQ92793 2442 aa13.81□□□□□ -0.2
SMPD1-210ENST00000534405 ZFYVE26Q68DK2 2539 aa13.81□□□□□ -0.2
SMPD1-210ENST00000534405 CENPEQ02224 2701 aa13.8□□□□□ -0.2
SMPD1-210ENST00000534405 MXRA5Q9NR99 2828 aa13.8□□□□□ -0.2
SMPD1-210ENST00000534405 HOXD3P31249 432 aaPredicted RBP13.8□□□□□ -0.2
SMPD1-210ENST00000534405 Q9HAA7 133 aa13.8□□□□□ -0.2
SMPD1-210ENST00000534405 IGHV1OR15-1A0A075B7D0 117 aa13.79□□□□□ -0.2
SMPD1-210ENST00000534405 ZNF702PQ9H963 129 aa13.79□□□□□ -0.2
SMPD1-210ENST00000534405 NACAE9PAV3 2078 aa13.79□□□□□ -0.2
SMPD1-210ENST00000534405 SOSTDC1Q6X4U4 206 aa13.79□□□□□ -0.2
SMPD1-210ENST00000534405 C14orf132Q9NPU4 83 aa13.79□□□□□ -0.2
SMPD1-210ENST00000534405 PRB1P04280 392 aa13.78□□□□□ -0.2
SMPD1-210ENST00000534405 C16orf95Q9H693 158 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms