RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 PPP1R2P9O14990 202 aa12.21□□□□□ -0.45
LRRK1-210ENST00000534045 XCL1P47992 114 aa12.21□□□□□ -0.45
LRRK1-210ENST00000534045 FLG2Q5D862 2391 aaPredicted RBP12.21□□□□□ -0.46
LRRK1-210ENST00000534045 S100A8P05109 93 aa12.2□□□□□ -0.46
LRRK1-210ENST00000534045 SUMO2P61956 95 aaKnown RBP12.2□□□□□ -0.46
LRRK1-210ENST00000534045 HIGD2BQ4VC39 106 aa12.2□□□□□ -0.46
LRRK1-210ENST00000534045 FAM104BQ5XKR9 115 aa12.2□□□□□ -0.46
LRRK1-210ENST00000534045 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.2□□□□□ -0.46
LRRK1-210ENST00000534045 LINC00959A0A1B0GUT2 108 aa12.19□□□□□ -0.46
LRRK1-210ENST00000534045 LINC00862A6NCI5 91 aa12.19□□□□□ -0.46
LRRK1-210ENST00000534045 CKS2P33552 79 aa12.19□□□□□ -0.46
LRRK1-210ENST00000534045 RAB14P61106 215 aa12.19□□□□□ -0.46
LRRK1-210ENST00000534045 RPL37AP61513 92 aaKnown RBP12.19□□□□□ -0.46
LRRK1-210ENST00000534045 ZNF664Q8N3J9 261 aa12.19□□□□□ -0.46
LRRK1-210ENST00000534045 TMEM18Q96B42 140 aa12.19□□□□□ -0.46
LRRK1-210ENST00000534045 F8W036 122 aa12.18□□□□□ -0.46
LRRK1-210ENST00000534045 CCL25O15444 150 aa12.18□□□□□ -0.46
LRRK1-210ENST00000534045 MRPL51Q4U2R6 128 aaKnown RBP12.18□□□□□ -0.46
LRRK1-210ENST00000534045 MRPL52Q86TS9 123 aaKnown RBP12.18□□□□□ -0.46
LRRK1-210ENST00000534045 C15orf56Q8N910 161 aa12.18□□□□□ -0.46
LRRK1-210ENST00000534045 VPS13BQ7Z7G8 4022 aa12.17□□□□□ -0.46
LRRK1-210ENST00000534045 SLPIP03973 132 aa12.17□□□□□ -0.46
LRRK1-210ENST00000534045 CDC42SE2Q9NRR3 84 aa12.17□□□□□ -0.46
LRRK1-210ENST00000534045 FOXI1Q12951 378 aa12.16□□□□□ -0.46
LRRK1-210ENST00000534045 MRPL54Q6P161 138 aaKnown RBP12.16□□□□□ -0.46
LRRK1-210ENST00000534045 NRACQ8N912 160 aa12.16□□□□□ -0.46
LRRK1-210ENST00000534045 TCAPO15273 167 aa12.15□□□□□ -0.46
LRRK1-210ENST00000534045 HBBP68871 147 aa12.15□□□□□ -0.46
LRRK1-210ENST00000534045 C20orf78Q9BR46 151 aa12.15□□□□□ -0.46
LRRK1-210ENST00000534045 IGHV1-58A0A0C4DH39 117 aa12.14□□□□□ -0.47
LRRK1-210ENST00000534045 COX6A2Q02221 97 aa12.14□□□□□ -0.47
LRRK1-210ENST00000534045 GVQW2A0A096LPI5 108 aaPredicted RBP12.13□□□□□ -0.47
LRRK1-210ENST00000534045 C1orf196B1AJZ1 125 aa12.13□□□□□ -0.47
LRRK1-210ENST00000534045 PANO1I0J062 215 aa12.13□□□□□ -0.47
LRRK1-210ENST00000534045 ZNF561-AS1K7EIQ3 104 aa12.13□□□□□ -0.47
LRRK1-210ENST00000534045 MALP21145 153 aa12.13□□□□□ -0.47
LRRK1-210ENST00000534045 CD164L2Q6UWJ8 174 aa12.13□□□□□ -0.47
LRRK1-210ENST00000534045 TNFRSF6BO95407 300 aa12.12□□□□□ -0.47
LRRK1-210ENST00000534045 CHTF8P0CG12 524 aa12.12□□□□□ -0.47
LRRK1-210ENST00000534045 PKIGQ9Y2B9 76 aa12.12□□□□□ -0.47
LRRK1-210ENST00000534045 CSDC2Q9Y534 153 aaKnown RBP12.12□□□□□ -0.47
LRRK1-210ENST00000534045 TRBV24-1A0A075B6N3 115 aa12.11□□□□□ -0.47
LRRK1-210ENST00000534045 A0A087WYN8 130 aa12.11□□□□□ -0.47
LRRK1-210ENST00000534045 KRTAP29-1A8MX34 341 aaPredicted RBP12.11□□□□□ -0.47
LRRK1-210ENST00000534045 PPBPP02775 128 aa12.11□□□□□ -0.47
LRRK1-210ENST00000534045 UBE2D4Q9Y2X8 147 aa12.11□□□□□ -0.47
LRRK1-210ENST00000534045 TRAV13-1A0A0B4J241 112 aa12.1□□□□□ -0.47
LRRK1-210ENST00000534045 IGKV2-24A0A0C4DH68 120 aa12.1□□□□□ -0.47
LRRK1-210ENST00000534045 D6R8Y8 96 aa12.1□□□□□ -0.47
LRRK1-210ENST00000534045 CIRBPQ14011 172 aaKnown RBP12.1□□□□□ -0.47
LRRK1-210ENST00000534045 MAJINQ3KP22 176 aa12.1□□□□□ -0.47
LRRK1-210ENST00000534045 COX7A2LO14548 114 aa12.09□□□□□ -0.47
LRRK1-210ENST00000534045 PNRC1Q12796 327 aaPredicted RBP12.09□□□□□ -0.47
LRRK1-210ENST00000534045 RNASE13Q5GAN3 156 aaKnown RBP12.09□□□□□ -0.47
LRRK1-210ENST00000534045 PRSS3P2Q8NHM4 247 aa12.09□□□□□ -0.47
LRRK1-210ENST00000534045 SPACA4Q8TDM5 124 aa12.09□□□□□ -0.47
LRRK1-210ENST00000534045 C7orf33Q8WU49 177 aa12.09□□□□□ -0.47
LRRK1-210ENST00000534045 MT-ND4LP03901 98 aa12.08□□□□□ -0.48
LRRK1-210ENST00000534045 RAB5AP20339 215 aa12.08□□□□□ -0.48
LRRK1-210ENST00000534045 KRTAP10-4P60372 401 aaPredicted RBP12.08□□□□□ -0.48
LRRK1-210ENST00000534045 RPL32P62910 135 aaKnown RBP12.08□□□□□ -0.48
LRRK1-210ENST00000534045 ATP5L2Q7Z4Y8 100 aa12.08□□□□□ -0.48
LRRK1-210ENST00000534045 LINC00526Q96FQ7 95 aa12.08□□□□□ -0.48
LRRK1-210ENST00000534045 TIMM21Q9BVV7 248 aa12.08□□□□□ -0.48
LRRK1-210ENST00000534045 MYCBP2O75592 4640 aa12.07□□□□□ -0.48
LRRK1-210ENST00000534045 PHOX2AO14813 284 aa12.07□□□□□ -0.48
LRRK1-210ENST00000534045 TMEM136Q6ZRR5 245 aa12.07□□□□□ -0.48
LRRK1-210ENST00000534045 ORMDL3Q8N138 153 aa12.07□□□□□ -0.48
LRRK1-210ENST00000534045 CARD19Q96LW7 228 aa12.07□□□□□ -0.48
LRRK1-210ENST00000534045 SMIM2Q9BVW6 85 aa12.07□□□□□ -0.48
LRRK1-210ENST00000534045 LINC00474Q9P2X8 69 aa12.07□□□□□ -0.48
LRRK1-210ENST00000534045 A0A1B0GXF2 115 aa12.06□□□□□ -0.48
LRRK1-210ENST00000534045 OXTP01178 125 aa12.06□□□□□ -0.48
LRRK1-210ENST00000534045 NPYP01303 97 aa12.06□□□□□ -0.48
LRRK1-210ENST00000534045 SYCNQ0VAF6 134 aa12.06□□□□□ -0.48
LRRK1-210ENST00000534045 ANAPC16Q96DE5 110 aa12.06□□□□□ -0.48
LRRK1-210ENST00000534045 HERC1Q15751 4861 aa12.06□□□□□ -0.48
LRRK1-210ENST00000534045 APOMO95445 188 aa12.05□□□□□ -0.48
LRRK1-210ENST00000534045 PRELID3AQ96N28 172 aa12.05□□□□□ -0.48
LRRK1-210ENST00000534045 RPL39P62891 51 aaKnown RBP12.04□□□□□ -0.48
LRRK1-210ENST00000534045 Q6ZUT4 128 aa12.04□□□□□ -0.48
LRRK1-210ENST00000534045 STPG4Q8N801 248 aa12.04□□□□□ -0.48
LRRK1-210ENST00000534045 PLAC8Q9NZF1 115 aa12.04□□□□□ -0.48
LRRK1-210ENST00000534045 C5orf38Q86SI9 138 aa12.03□□□□□ -0.48
LRRK1-210ENST00000534045 SPANXA1Q9NS26 97 aa12.03□□□□□ -0.48
LRRK1-210ENST00000534045 IGLV4-69A0A075B6H9 119 aa12.02□□□□□ -0.49
LRRK1-210ENST00000534045 CAMK2N2Q96S95 79 aa12.02□□□□□ -0.49
LRRK1-210ENST00000534045 A0A096LNI7 61 aa12□□□□□ -0.49
LRRK1-210ENST00000534045 LOC389332A0A1B0GUA5 103 aa12□□□□□ -0.49
LRRK1-210ENST00000534045 IFI27P40305 119 aaPredicted RBP12□□□□□ -0.49
LRRK1-210ENST00000534045 IFITM10A6NMD0 228 aa11.99□□□□□ -0.49
LRRK1-210ENST00000534045 MAP1LC3AQ9H492 121 aa11.99□□□□□ -0.49
LRRK1-210ENST00000534045 LAMTOR2Q9Y2Q5 125 aa11.99□□□□□ -0.49
LRRK1-210ENST00000534045 LOC107984640A0A0U1RRK4 108 aa11.98□□□□□ -0.49
LRRK1-210ENST00000534045 MRPS36P82909 103 aaKnown RBP11.98□□□□□ -0.49
LRRK1-210ENST00000534045 GAGE2BQ13066 116 aa11.98□□□□□ -0.49
LRRK1-210ENST00000534045 CLLU1Q5K131 121 aa11.98□□□□□ -0.49
LRRK1-210ENST00000534045 OPRPNQ99935 248 aaPredicted RBP11.98□□□□□ -0.49
LRRK1-210ENST00000534045 HNRNPA3P51991 378 aaKnown RBP11.97□□□□□ -0.49
LRRK1-210ENST00000534045 C2orf48Q96LS8 159 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms