RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 NTN5Q8WTR8 489 aaPredicted RBP8.76□□□□□ -1.01
CMTM1-219ENST00000533953 TMEM101Q96IK0 257 aa8.76□□□□□ -1.01
CMTM1-219ENST00000533953 PRSS1P07477 247 aa8.75□□□□□ -1.01
CMTM1-219ENST00000533953 RPL32P62910 135 aaKnown RBP8.75□□□□□ -1.01
CMTM1-219ENST00000533953 SLC7A5P1Q8MH63 180 aa8.75□□□□□ -1.01
CMTM1-219ENST00000533953 OPRPNQ99935 248 aaPredicted RBP8.75□□□□□ -1.01
CMTM1-219ENST00000533953 CDC42SE2Q9NRR3 84 aa8.75□□□□□ -1.01
CMTM1-219ENST00000533953 FAM30AQ9NZY2 134 aa8.75□□□□□ -1.01
CMTM1-219ENST00000533953 APOBP04114 4563 aaKnown RBP8.75□□□□□ -1.01
CMTM1-219ENST00000533953 TRAV8-4A0A0B4J246 113 aa8.74□□□□□ -1.01
CMTM1-219ENST00000533953 PHOX2AO14813 284 aa8.74□□□□□ -1.01
CMTM1-219ENST00000533953 ZNF25P17030 456 aaPredicted RBP8.74□□□□□ -1.01
CMTM1-219ENST00000533953 S100PP25815 95 aa8.74□□□□□ -1.01
CMTM1-219ENST00000533953 XGP55808 180 aa8.74□□□□□ -1.01
CMTM1-219ENST00000533953 RHEBQ15382 184 aa8.74□□□□□ -1.01
CMTM1-219ENST00000533953 DGAT2L7PQ6IED9 249 aa8.74□□□□□ -1.01
CMTM1-219ENST00000533953 MRPL52Q86TS9 123 aaKnown RBP8.74□□□□□ -1.01
CMTM1-219ENST00000533953 ZNF664Q8N3J9 261 aa8.74□□□□□ -1.01
CMTM1-219ENST00000533953 CHCHD10Q8WYQ3 142 aaPredicted RBP8.74□□□□□ -1.01
CMTM1-219ENST00000533953 UBE2D4Q9Y2X8 147 aa8.74□□□□□ -1.01
CMTM1-219ENST00000533953 TGIF2-C20orf24A0A0A6YYL0 155 aa8.73□□□□□ -1.01
CMTM1-219ENST00000533953 LINC00959A0A1B0GUT2 108 aa8.73□□□□□ -1.01
CMTM1-219ENST00000533953 CDK2AP2O75956 126 aa8.73□□□□□ -1.01
CMTM1-219ENST00000533953 XCL1P47992 114 aa8.73□□□□□ -1.01
CMTM1-219ENST00000533953 Q6ZUT4 128 aa8.73□□□□□ -1.01
CMTM1-219ENST00000533953 FAM104AQ969W3 186 aa8.73□□□□□ -1.01
CMTM1-219ENST00000533953 KRTAP4-5Q9BYR2 181 aa8.73□□□□□ -1.01
CMTM1-219ENST00000533953 TRAV9-1A0A075B6T8 112 aa8.72□□□□□ -1.01
CMTM1-219ENST00000533953 CCL25O15444 150 aa8.72□□□□□ -1.01
CMTM1-219ENST00000533953 MAP1LC3AQ9H492 121 aa8.72□□□□□ -1.01
CMTM1-219ENST00000533953 HSPG2P98160 4391 aa8.72□□□□□ -1.01
CMTM1-219ENST00000533953 PRSS47A8MTI9 375 aa8.71□□□□□ -1.02
CMTM1-219ENST00000533953 RAB5AP20339 215 aa8.71□□□□□ -1.02
CMTM1-219ENST00000533953 TRAV13-1A0A0B4J241 112 aa8.7□□□□□ -1.02
CMTM1-219ENST00000533953 SLPIP03973 132 aa8.7□□□□□ -1.02
CMTM1-219ENST00000533953 IFI27P40305 119 aaPredicted RBP8.7□□□□□ -1.02
CMTM1-219ENST00000533953 FOXI1Q12951 378 aa8.7□□□□□ -1.02
CMTM1-219ENST00000533953 HIGD2BQ4VC39 106 aa8.7□□□□□ -1.02
CMTM1-219ENST00000533953 Q8N8P6 123 aa8.7□□□□□ -1.02
CMTM1-219ENST00000533953 hDV102S1A0JD36 115 aa8.69□□□□□ -1.02
CMTM1-219ENST00000533953 SNAPINO95295 136 aa8.69□□□□□ -1.02
CMTM1-219ENST00000533953 SMR3BP02814 79 aaPredicted RBP8.69□□□□□ -1.02
CMTM1-219ENST00000533953 NDUFA5Q16718 116 aa8.69□□□□□ -1.02
CMTM1-219ENST00000533953 C14orf177Q52M58 125 aa8.69□□□□□ -1.02
CMTM1-219ENST00000533953 SVBPQ8N300 66 aa8.69□□□□□ -1.02
CMTM1-219ENST00000533953 C15orf56Q8N910 161 aa8.69□□□□□ -1.02
CMTM1-219ENST00000533953 TMEM18Q96B42 140 aa8.69□□□□□ -1.02
CMTM1-219ENST00000533953 TIMM21Q9BVV7 248 aa8.69□□□□□ -1.02
CMTM1-219ENST00000533953 GNB1LQ9BYB4 327 aa8.69□□□□□ -1.02
CMTM1-219ENST00000533953 MRPL18Q9H0U6 180 aaKnown RBP8.69□□□□□ -1.02
CMTM1-219ENST00000533953 LAMTOR2Q9Y2Q5 125 aa8.69□□□□□ -1.02
CMTM1-219ENST00000533953 CSDC2Q9Y534 153 aaKnown RBP8.69□□□□□ -1.02
CMTM1-219ENST00000533953 FABP9Q0Z7S8 132 aa8.68□□□□□ -1.02
CMTM1-219ENST00000533953 SS18Q15532 418 aa8.68□□□□□ -1.02
CMTM1-219ENST00000533953 ZC2HC1BQ5TFG8 222 aa8.68□□□□□ -1.02
CMTM1-219ENST00000533953 LINC00526Q96FQ7 95 aa8.68□□□□□ -1.02
CMTM1-219ENST00000533953 ALKBH7Q9BT30 221 aaPredicted RBP8.68□□□□□ -1.02
CMTM1-219ENST00000533953 SPANXA1Q9NS26 97 aa8.66□□□□□ -1.02
CMTM1-219ENST00000533953 DNAH8Q96JB1 4490 aa8.66□□□□□ -1.02
CMTM1-219ENST00000533953 SMAGPQ0VAQ4 97 aa8.65□□□□□ -1.02
CMTM1-219ENST00000533953 CD164L2Q6UWJ8 174 aa8.65□□□□□ -1.02
CMTM1-219ENST00000533953 C2orf66Q6UXQ4 117 aa8.65□□□□□ -1.02
CMTM1-219ENST00000533953 C5orf38Q86SI9 138 aa8.65□□□□□ -1.02
CMTM1-219ENST00000533953 PRSS3P2Q8NHM4 247 aa8.65□□□□□ -1.02
CMTM1-219ENST00000533953 TRAPPC1Q9Y5R8 145 aa8.65□□□□□ -1.02
CMTM1-219ENST00000533953 IGLV4-3A0A075B6K6 122 aa8.64□□□□□ -1.03
CMTM1-219ENST00000533953 C1orf196B1AJZ1 125 aa8.64□□□□□ -1.03
CMTM1-219ENST00000533953 CBLN2Q8IUK8 224 aa8.64□□□□□ -1.03
CMTM1-219ENST00000533953 Q8N1X5 172 aa8.64□□□□□ -1.03
CMTM1-219ENST00000533953 C9orf163Q8N9P6 203 aa8.64□□□□□ -1.03
CMTM1-219ENST00000533953 YPEL4Q96NS1 127 aa8.64□□□□□ -1.03
CMTM1-219ENST00000533953 NXT2Q9NPJ8 142 aaKnown RBP8.64□□□□□ -1.03
CMTM1-219ENST00000533953 IFITM10A6NMD0 228 aa8.63□□□□□ -1.03
CMTM1-219ENST00000533953 PANO1I0J062 215 aa8.63□□□□□ -1.03
CMTM1-219ENST00000533953 MRPS36P82909 103 aaKnown RBP8.63□□□□□ -1.03
CMTM1-219ENST00000533953 COX19Q49B96 90 aa8.63□□□□□ -1.03
CMTM1-219ENST00000533953 CFAP161Q6P656 301 aa8.63□□□□□ -1.03
CMTM1-219ENST00000533953 Q6ZSA8 131 aa8.63□□□□□ -1.03
CMTM1-219ENST00000533953 CYSLTR1Q9Y271 337 aa8.63□□□□□ -1.03
CMTM1-219ENST00000533953 MT-ND6P03923 174 aa8.62□□□□□ -1.03
CMTM1-219ENST00000533953 ORMDL2Q53FV1 153 aa8.62□□□□□ -1.03
CMTM1-219ENST00000533953 SDIM1Q6ZPB5 146 aa8.62□□□□□ -1.03
CMTM1-219ENST00000533953 AP5S1Q9NUS5 200 aa8.62□□□□□ -1.03
CMTM1-219ENST00000533953 PYGO1Q9Y3Y4 419 aa8.62□□□□□ -1.03
CMTM1-219ENST00000533953 GVQW2A0A096LPI5 108 aaPredicted RBP8.61□□□□□ -1.03
CMTM1-219ENST00000533953 IGIPA6NJ69 53 aa8.61□□□□□ -1.03
CMTM1-219ENST00000533953 COX7A2LO14548 114 aa8.61□□□□□ -1.03
CMTM1-219ENST00000533953 CNBPP62633 177 aaKnown RBP8.61□□□□□ -1.03
CMTM1-219ENST00000533953 COX6A2Q02221 97 aa8.61□□□□□ -1.03
CMTM1-219ENST00000533953 SCXQ7RTU7 201 aa8.61□□□□□ -1.03
CMTM1-219ENST00000533953 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.61□□□□□ -1.03
CMTM1-219ENST00000533953 FAT1Q14517 4588 aa8.61□□□□□ -1.03
CMTM1-219ENST00000533953 ABCA13Q86UQ4 5058 aa8.6□□□□□ -1.03
CMTM1-219ENST00000533953 IGHV1-58A0A0C4DH39 117 aa8.6□□□□□ -1.03
CMTM1-219ENST00000533953 MALP21145 153 aa8.6□□□□□ -1.03
CMTM1-219ENST00000533953 LINC00173Q6ZV60 143 aa8.6□□□□□ -1.03
CMTM1-219ENST00000533953 URB1-AS1Q96HZ7 61 aa8.6□□□□□ -1.03
CMTM1-219ENST00000533953 TMEM141Q96I45 108 aa8.6□□□□□ -1.03
CMTM1-219ENST00000533953 CHTF8P0CG12 524 aa8.59□□□□□ -1.03
CMTM1-219ENST00000533953 LINC00242Q5T6M2 205 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms