RNA–Protein interactions for RNA: ENST00000533078.5

CMTM1-216, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-216ENST00000533078 SLC51BQ86UW2 128 aa7.13□□□□□ -1.27
CMTM1-216ENST00000533078 GATD1Q8NB37 220 aa7.13□□□□□ -1.27
CMTM1-216ENST00000533078 LINC00526Q96FQ7 95 aa7.13□□□□□ -1.27
CMTM1-216ENST00000533078 MUC2Q02817 5179 aa7.13□□□□□ -1.27
CMTM1-216ENST00000533078 LINC00959A0A1B0GUT2 108 aa7.12□□□□□ -1.27
CMTM1-216ENST00000533078 SDHAF1A6NFY7 115 aa7.12□□□□□ -1.27
CMTM1-216ENST00000533078 I3L3M4 83 aa7.12□□□□□ -1.27
CMTM1-216ENST00000533078 PDE6DO43924 150 aa7.12□□□□□ -1.27
CMTM1-216ENST00000533078 CD164L2Q6UWJ8 174 aa7.12□□□□□ -1.27
CMTM1-216ENST00000533078 MRAP2Q96G30 205 aa7.12□□□□□ -1.27
CMTM1-216ENST00000533078 MED9Q9NWA0 146 aa7.12□□□□□ -1.27
CMTM1-216ENST00000533078 IGLV4-69A0A075B6H9 119 aa7.11□□□□□ -1.27
CMTM1-216ENST00000533078 RAB14P61106 215 aa7.11□□□□□ -1.27
CMTM1-216ENST00000533078 SMAGPQ0VAQ4 97 aa7.11□□□□□ -1.27
CMTM1-216ENST00000533078 C1orf137Q5JT78 98 aa7.11□□□□□ -1.27
CMTM1-216ENST00000533078 TSKUQ8WUA8 353 aa7.11□□□□□ -1.27
CMTM1-216ENST00000533078 DIRC1Q969H9 104 aa7.11□□□□□ -1.27
CMTM1-216ENST00000533078 RPL39LQ96EH5 51 aaKnown RBP7.11□□□□□ -1.27
CMTM1-216ENST00000533078 RAB19A4D1S5 217 aa7.1□□□□□ -1.27
CMTM1-216ENST00000533078 MEF2BQ02080 365 aaPredicted RBP7.1□□□□□ -1.27
CMTM1-216ENST00000533078 RPL18AQ02543 176 aaKnown RBP7.1□□□□□ -1.27
CMTM1-216ENST00000533078 SLC7A5P1Q8MH63 180 aa7.1□□□□□ -1.27
CMTM1-216ENST00000533078 CAMK2N2Q96S95 79 aa7.1□□□□□ -1.27
CMTM1-216ENST00000533078 CNFNQ9BYD5 112 aa7.1□□□□□ -1.27
CMTM1-216ENST00000533078 COX7A2LO14548 114 aa7.09□□□□□ -1.27
CMTM1-216ENST00000533078 BCL2L11O43521 198 aa7.09□□□□□ -1.27
CMTM1-216ENST00000533078 APOMO95445 188 aa7.09□□□□□ -1.27
CMTM1-216ENST00000533078 RPP21Q9H633 154 aaKnown RBP7.09□□□□□ -1.27
CMTM1-216ENST00000533078 C1orf196B1AJZ1 125 aa7.08□□□□□ -1.28
CMTM1-216ENST00000533078 C9orf116Q5BN46 136 aaPredicted RBP7.08□□□□□ -1.28
CMTM1-216ENST00000533078 NUDT10Q8NFP7 164 aa7.08□□□□□ -1.28
CMTM1-216ENST00000533078 BORCS7Q96B45 105 aa7.08□□□□□ -1.28
CMTM1-216ENST00000533078 NUDT11Q96G61 164 aa7.08□□□□□ -1.28
CMTM1-216ENST00000533078 ST20Q9HBF5 79 aa7.08□□□□□ -1.28
CMTM1-216ENST00000533078 TRAV1-1A0A0B4J248 108 aa7.07□□□□□ -1.28
CMTM1-216ENST00000533078 A0A1W2PNN7 141 aa7.07□□□□□ -1.28
CMTM1-216ENST00000533078 BCL2P10415 239 aa7.07□□□□□ -1.28
CMTM1-216ENST00000533078 CDC42SE2Q9NRR3 84 aa7.07□□□□□ -1.28
CMTM1-216ENST00000533078 C7orf77A4D0Y5 90 aa7.06□□□□□ -1.28
CMTM1-216ENST00000533078 ESDP10768 282 aa7.06□□□□□ -1.28
CMTM1-216ENST00000533078 UBE2D1P51668 147 aa7.06□□□□□ -1.28
CMTM1-216ENST00000533078 MRPL52Q86TS9 123 aaKnown RBP7.06□□□□□ -1.28
CMTM1-216ENST00000533078 PRR26Q8N8Z3 221 aa7.06□□□□□ -1.28
CMTM1-216ENST00000533078 NUP35Q8NFH5 326 aa7.06□□□□□ -1.28
CMTM1-216ENST00000533078 C2orf48Q96LS8 159 aa7.06□□□□□ -1.28
CMTM1-216ENST00000533078 TMEM242Q9NWH2 141 aa7.06□□□□□ -1.28
CMTM1-216ENST00000533078 IGLV1-50A0A075B6I6 118 aa7.05□□□□□ -1.28
CMTM1-216ENST00000533078 TRBV6-5A0A0K0K1A5 114 aa7.05□□□□□ -1.28
CMTM1-216ENST00000533078 FCER1GP30273 86 aa7.05□□□□□ -1.28
CMTM1-216ENST00000533078 TAGLN2P37802 199 aaKnown RBP7.05□□□□□ -1.28
CMTM1-216ENST00000533078 PRR4Q16378 134 aa7.05□□□□□ -1.28
CMTM1-216ENST00000533078 PHF5AQ7RTV0 110 aaKnown RBP7.05□□□□□ -1.28
CMTM1-216ENST00000533078 RNASE7Q9H1E1 156 aaKnown RBP7.05□□□□□ -1.28
CMTM1-216ENST00000533078 TRBV20OR9-2A0A075B6H5 130 aa7.04□□□□□ -1.28
CMTM1-216ENST00000533078 A0A087WZ39 114 aa7.04□□□□□ -1.28
CMTM1-216ENST00000533078 H0Y9J4 135 aa7.04□□□□□ -1.28
CMTM1-216ENST00000533078 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.04□□□□□ -1.28
CMTM1-216ENST00000533078 TSHBP01222 138 aa7.04□□□□□ -1.28
CMTM1-216ENST00000533078 IGLV7-43P04211 117 aa7.04□□□□□ -1.28
CMTM1-216ENST00000533078 IMMP2LQ96T52 175 aa7.04□□□□□ -1.28
CMTM1-216ENST00000533078 A8MWL6 223 aa7.03□□□□□ -1.28
CMTM1-216ENST00000533078 GATCO43716 136 aaKnown RBP7.03□□□□□ -1.28
CMTM1-216ENST00000533078 RPL13AP40429 203 aaKnown RBP7.03□□□□□ -1.28
CMTM1-216ENST00000533078 SPAG11BQ08648 103 aa7.03□□□□□ -1.28
CMTM1-216ENST00000533078 TRAV13-1A0A0B4J241 112 aa7.02□□□□□ -1.29
CMTM1-216ENST00000533078 FOXA3P55318 350 aaPredicted RBP7.02□□□□□ -1.29
CMTM1-216ENST00000533078 RNF151Q2KHN1 245 aa7.02□□□□□ -1.29
CMTM1-216ENST00000533078 TMEM18Q96B42 140 aa7.02□□□□□ -1.29
CMTM1-216ENST00000533078 OPRPNQ99935 248 aaPredicted RBP7.02□□□□□ -1.29
CMTM1-216ENST00000533078 TRBV27A0A0K0K1C4 114 aa7.01□□□□□ -1.29
CMTM1-216ENST00000533078 F8WDY8 70 aa7.01□□□□□ -1.29
CMTM1-216ENST00000533078 VCYO14598 125 aa7.01□□□□□ -1.29
CMTM1-216ENST00000533078 PPP1R17O96001 155 aa7.01□□□□□ -1.29
CMTM1-216ENST00000533078 UBE2BP63146 152 aa7.01□□□□□ -1.29
CMTM1-216ENST00000533078 ALKAL2Q6UX46 152 aa7.01□□□□□ -1.29
CMTM1-216ENST00000533078 C5orf38Q86SI9 138 aa7.01□□□□□ -1.29
CMTM1-216ENST00000533078 COMMD7Q86VX2 200 aa7.01□□□□□ -1.29
CMTM1-216ENST00000533078 OR10D4PQ8NGN7 298 aa7.01□□□□□ -1.29
CMTM1-216ENST00000533078 KIR2DL4Q99706 377 aa7.01□□□□□ -1.29
CMTM1-216ENST00000533078 CSDC2Q9Y534 153 aaKnown RBP7.01□□□□□ -1.29
CMTM1-216ENST00000533078 K7EN84 100 aa7□□□□□ -1.29
CMTM1-216ENST00000533078 NDUFA1O15239 70 aa7□□□□□ -1.29
CMTM1-216ENST00000533078 UQCC3Q6UW78 93 aa7□□□□□ -1.29
CMTM1-216ENST00000533078 OCC1Q8TAD7 63 aa7□□□□□ -1.29
CMTM1-216ENST00000533078 MRPL35Q9NZE8 188 aaKnown RBP7□□□□□ -1.29
CMTM1-216ENST00000533078 A0A1B0GUT8 65 aa6.99□□□□□ -1.29
CMTM1-216ENST00000533078 POLR2KP53803 58 aaKnown RBP6.99□□□□□ -1.29
CMTM1-216ENST00000533078 CT83Q5H943 113 aa6.99□□□□□ -1.29
CMTM1-216ENST00000533078 ORAOV1Q8WV07 137 aa6.99□□□□□ -1.29
CMTM1-216ENST00000533078 TMEM191AQ9H0A3 160 aa6.99□□□□□ -1.29
CMTM1-216ENST00000533078 BLOC1S1P78537 153 aa6.98□□□□□ -1.29
CMTM1-216ENST00000533078 TMEM241Q24JQ0 296 aa6.98□□□□□ -1.29
CMTM1-216ENST00000533078 RNASE13Q5GAN3 156 aaKnown RBP6.98□□□□□ -1.29
CMTM1-216ENST00000533078 FAM231DQ6ZW35 169 aa6.98□□□□□ -1.29
CMTM1-216ENST00000533078 FAM19A5Q7Z5A7 132 aaPredicted RBP6.98□□□□□ -1.29
CMTM1-216ENST00000533078 UBE2D4Q9Y2X8 147 aa6.98□□□□□ -1.29
CMTM1-216ENST00000533078 FAT4Q6V0I7 4981 aa6.98□□□□□ -1.29
CMTM1-216ENST00000533078 PPP1R2P9O14990 202 aa6.97□□□□□ -1.29
CMTM1-216ENST00000533078 KRTAP9-2Q9BYQ4 174 aa6.97□□□□□ -1.29
CMTM1-216ENST00000533078 HIGD1CA8MV81 97 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms