RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 TTTY13Q9BZ97 58 aa7.98□□□□□ -1.13
COLCA1-203ENST00000532918 SHANK1Q9Y566 2161 aa7.98□□□□□ -1.13
COLCA1-203ENST00000532918 LRCOL1A6NCL2 159 aa7.98□□□□□ -1.13
COLCA1-203ENST00000532918 TCL1BO95988 128 aa7.98□□□□□ -1.13
COLCA1-203ENST00000532918 SYCNQ0VAF6 134 aa7.98□□□□□ -1.13
COLCA1-203ENST00000532918 CFAP126Q5VTH2 177 aa7.98□□□□□ -1.13
COLCA1-203ENST00000532918 SMIM26A0A096LP01 95 aa7.98□□□□□ -1.13
COLCA1-203ENST00000532918 IGHV4-30-4P0DP06 118 aa7.98□□□□□ -1.13
COLCA1-203ENST00000532918 LELP1Q5T871 98 aa7.98□□□□□ -1.13
COLCA1-203ENST00000532918 HIGD2AQ9BW72 106 aa7.98□□□□□ -1.13
COLCA1-203ENST00000532918 FAM19A1Q7Z5A9 133 aa7.97□□□□□ -1.13
COLCA1-203ENST00000532918 EIF4EBP1Q13541 118 aaPredicted RBP7.97□□□□□ -1.13
COLCA1-203ENST00000532918 ZNF706Q9Y5V0 76 aaPredicted RBP7.97□□□□□ -1.13
COLCA1-203ENST00000532918 NUP210LQ5VU65 1888 aa7.97□□□□□ -1.13
COLCA1-203ENST00000532918 CSPG4Q6UVK1 2322 aa7.97□□□□□ -1.13
COLCA1-203ENST00000532918 IGLV2-18A0A075B6J9 118 aa7.97□□□□□ -1.13
COLCA1-203ENST00000532918 HRCT1Q6UXD1 115 aa7.97□□□□□ -1.13
COLCA1-203ENST00000532918 NEXN-AS1Q8NBZ9 246 aa7.97□□□□□ -1.13
COLCA1-203ENST00000532918 LINC00474Q9P2X8 69 aa7.97□□□□□ -1.13
COLCA1-203ENST00000532918 MUC22E2RYF6 1773 aaPredicted RBP7.97□□□□□ -1.13
COLCA1-203ENST00000532918 DAND5Q8N907 189 aa7.97□□□□□ -1.13
COLCA1-203ENST00000532918 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.96□□□□□ -1.13
COLCA1-203ENST00000532918 BRWD1-AS2P59051 145 aa7.96□□□□□ -1.13
COLCA1-203ENST00000532918 COL5A1P20908 1838 aaPredicted RBP7.96□□□□□ -1.13
COLCA1-203ENST00000532918 M0R2N4 97 aa7.96□□□□□ -1.14
COLCA1-203ENST00000532918 BBC3Q96PG8 261 aaPredicted RBP7.96□□□□□ -1.14
COLCA1-203ENST00000532918 ZNF80P51504 273 aaPredicted RBP7.96□□□□□ -1.14
COLCA1-203ENST00000532918 RBX1P62877 108 aa7.96□□□□□ -1.14
COLCA1-203ENST00000532918 C1orf229Q6ZS94 237 aaPredicted RBP7.96□□□□□ -1.14
COLCA1-203ENST00000532918 A0A0J9YWU9 116 aa7.96□□□□□ -1.14
COLCA1-203ENST00000532918 Q8N976 141 aa7.96□□□□□ -1.14
COLCA1-203ENST00000532918 SPATA12Q7Z6I5 190 aa7.95□□□□□ -1.14
COLCA1-203ENST00000532918 C11orf1Q9H5F2 150 aa7.95□□□□□ -1.14
COLCA1-203ENST00000532918 NHLRC4P0CG21 123 aaPredicted RBP7.95□□□□□ -1.14
COLCA1-203ENST00000532918 NACAE9PAV3 2078 aa7.95□□□□□ -1.14
COLCA1-203ENST00000532918 ALPK3Q96L96 1907 aa7.95□□□□□ -1.14
COLCA1-203ENST00000532918 NAV2Q8IVL1 2488 aa7.95□□□□□ -1.14
COLCA1-203ENST00000532918 TEX49A0A1B0GTD5 131 aa7.95□□□□□ -1.14
COLCA1-203ENST00000532918 ENHOQ6UWT2 76 aa7.95□□□□□ -1.14
COLCA1-203ENST00000532918 IMUPQ9GZP8 106 aa7.95□□□□□ -1.14
COLCA1-203ENST00000532918 AVPP01185 164 aa7.94□□□□□ -1.14
COLCA1-203ENST00000532918 ZNF295-AS1Q8N0V1 137 aa7.94□□□□□ -1.14
COLCA1-203ENST00000532918 COX7CP15954 63 aa7.94□□□□□ -1.14
COLCA1-203ENST00000532918 U3KQK5 164 aa7.94□□□□□ -1.14
COLCA1-203ENST00000532918 SONP18583 2426 aaKnown RBP7.94□□□□□ -1.14
COLCA1-203ENST00000532918 C18orf65Q6ZTR6 163 aa7.93□□□□□ -1.14
COLCA1-203ENST00000532918 LINC00467Q9BRT7 94 aa7.93□□□□□ -1.14
COLCA1-203ENST00000532918 CCDC179H3BU77 68 aa7.93□□□□□ -1.14
COLCA1-203ENST00000532918 ZNF580Q9UK33 172 aa7.93□□□□□ -1.14
COLCA1-203ENST00000532918 NANOS2P60321 138 aaKnown RBP7.93□□□□□ -1.14
COLCA1-203ENST00000532918 MRGPRG-AS1Q2M3A8 158 aa7.93□□□□□ -1.14
COLCA1-203ENST00000532918 PLCE1Q9P212 2302 aa7.93□□□□□ -1.14
COLCA1-203ENST00000532918 NCOR2Q9Y618 2525 aa7.93□□□□□ -1.14
COLCA1-203ENST00000532918 FREM1Q5H8C1 2179 aa7.93□□□□□ -1.14
COLCA1-203ENST00000532918 LOC107984640A0A0U1RRK4 108 aa7.93□□□□□ -1.14
COLCA1-203ENST00000532918 TNRC6AQ8NDV7 1962 aaKnown RBP7.92□□□□□ -1.14
COLCA1-203ENST00000532918 CEMP1Q6PRD7 247 aaPredicted RBP7.92□□□□□ -1.14
COLCA1-203ENST00000532918 IGLV4-69A0A075B6H9 119 aa7.92□□□□□ -1.14
COLCA1-203ENST00000532918 IBA57-AS1B1ANH7 110 aa7.92□□□□□ -1.14
COLCA1-203ENST00000532918 SERP1Q9Y6X1 66 aa7.92□□□□□ -1.14
COLCA1-203ENST00000532918 LINC00694P0DN24 101 aa7.92□□□□□ -1.14
COLCA1-203ENST00000532918 PIK3CD-AS1Q5SR53 167 aa7.92□□□□□ -1.14
COLCA1-203ENST00000532918 FAM19A5Q7Z5A7 132 aaPredicted RBP7.92□□□□□ -1.14
COLCA1-203ENST00000532918 MED12LQ86YW9 2145 aa7.91□□□□□ -1.14
COLCA1-203ENST00000532918 IGLV1-51P01701 117 aa7.91□□□□□ -1.14
COLCA1-203ENST00000532918 MRPS36P82909 103 aaKnown RBP7.91□□□□□ -1.14
COLCA1-203ENST00000532918 GDF5OSQ5U4N7 250 aa7.91□□□□□ -1.14
COLCA1-203ENST00000532918 FAM19A3Q7Z5A8 133 aa7.91□□□□□ -1.14
COLCA1-203ENST00000532918 CD164L2Q6UWJ8 174 aa7.91□□□□□ -1.14
COLCA1-203ENST00000532918 FRMD6-AS1P0C7T7 363 aa7.91□□□□□ -1.14
COLCA1-203ENST00000532918 CRIP2P52943 208 aaPredicted RBP7.91□□□□□ -1.14
COLCA1-203ENST00000532918 NAV3Q8IVL0 2385 aa7.91□□□□□ -1.14
COLCA1-203ENST00000532918 SNURFQ9Y675 71 aa7.91□□□□□ -1.14
COLCA1-203ENST00000532918 TNCP24821 2201 aa7.91□□□□□ -1.14
COLCA1-203ENST00000532918 TRBV27A0A0K0K1C4 114 aa7.9□□□□□ -1.14
COLCA1-203ENST00000532918 M0QY20 66 aa7.9□□□□□ -1.14
COLCA1-203ENST00000532918 WFDC10AQ9H1F0 79 aa7.9□□□□□ -1.14
COLCA1-203ENST00000532918 PCDH15Q96QU1 1955 aa7.9□□□□□ -1.14
COLCA1-203ENST00000532918 CRIP3Q6Q6R5 217 aa7.9□□□□□ -1.14
COLCA1-203ENST00000532918 Q6ZS46 218 aa7.9□□□□□ -1.14
COLCA1-203ENST00000532918 CHCHD7Q9BUK0 85 aa7.9□□□□□ -1.14
COLCA1-203ENST00000532918 Q6ZPA2 131 aa7.89□□□□□ -1.15
COLCA1-203ENST00000532918 BRI3O95415 125 aa7.89□□□□□ -1.15
COLCA1-203ENST00000532918 KLLNB2CW77 178 aa7.89□□□□□ -1.15
COLCA1-203ENST00000532918 SCXQ7RTU7 201 aa7.88□□□□□ -1.15
COLCA1-203ENST00000532918 TRBV6-5A0A0K0K1A5 114 aa7.88□□□□□ -1.15
COLCA1-203ENST00000532918 A0A1B0GXF2 115 aa7.88□□□□□ -1.15
COLCA1-203ENST00000532918 DCANP1Q8TF63 244 aa7.88□□□□□ -1.15
COLCA1-203ENST00000532918 Q8N9L7 120 aa7.88□□□□□ -1.15
COLCA1-203ENST00000532918 PLA2G2EQ9NZK7 142 aa7.88□□□□□ -1.15
COLCA1-203ENST00000532918 PYGO1Q9Y3Y4 419 aa7.88□□□□□ -1.15
COLCA1-203ENST00000532918 ARHGAP21Q5T5U3 1957 aa7.87□□□□□ -1.15
COLCA1-203ENST00000532918 MUC7Q8TAX7 377 aa7.87□□□□□ -1.15
COLCA1-203ENST00000532918 FSHBP01225 129 aa7.87□□□□□ -1.15
COLCA1-203ENST00000532918 IGLV4-3A0A075B6K6 122 aa7.87□□□□□ -1.15
COLCA1-203ENST00000532918 UBE2D4Q9Y2X8 147 aa7.87□□□□□ -1.15
COLCA1-203ENST00000532918 HIVEP3Q5T1R4 2406 aa7.87□□□□□ -1.15
COLCA1-203ENST00000532918 LRP4O75096 1905 aa7.87□□□□□ -1.15
COLCA1-203ENST00000532918 C9orf85Q96MD7 179 aa7.87□□□□□ -1.15
COLCA1-203ENST00000532918 F8WDY8 70 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms