RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 KIR2DL4Q99706 377 aa11.09□□□□□ -0.63
PHRF1-204ENST00000532550 IGHV3-64A0A075B6Q5 118 aa11.08□□□□□ -0.64
PHRF1-204ENST00000532550 LINC00862A6NCI5 91 aa11.08□□□□□ -0.64
PHRF1-204ENST00000532550 PPP1R2P9O14990 202 aa11.08□□□□□ -0.64
PHRF1-204ENST00000532550 SLPIP03973 132 aa11.08□□□□□ -0.64
PHRF1-204ENST00000532550 S100A8P05109 93 aa11.08□□□□□ -0.64
PHRF1-204ENST00000532550 CKS2P33552 79 aa11.08□□□□□ -0.64
PHRF1-204ENST00000532550 RAB14P61106 215 aa11.08□□□□□ -0.64
PHRF1-204ENST00000532550 MRPL52Q86TS9 123 aaKnown RBP11.08□□□□□ -0.64
PHRF1-204ENST00000532550 DPH3Q96FX2 82 aa11.08□□□□□ -0.64
PHRF1-204ENST00000532550 CDC42SE2Q9NRR3 84 aa11.08□□□□□ -0.64
PHRF1-204ENST00000532550 LINC00959A0A1B0GUT2 108 aa11.07□□□□□ -0.64
PHRF1-204ENST00000532550 SMAGPQ0VAQ4 97 aa11.07□□□□□ -0.64
PHRF1-204ENST00000532550 SS18Q15532 418 aa11.07□□□□□ -0.64
PHRF1-204ENST00000532550 ZNF664Q8N3J9 261 aa11.07□□□□□ -0.64
PHRF1-204ENST00000532550 C15orf56Q8N910 161 aa11.07□□□□□ -0.64
PHRF1-204ENST00000532550 F8W036 122 aa11.06□□□□□ -0.64
PHRF1-204ENST00000532550 XCL1P47992 114 aa11.06□□□□□ -0.64
PHRF1-204ENST00000532550 HIGD2BQ4VC39 106 aa11.06□□□□□ -0.64
PHRF1-204ENST00000532550 MRPL54Q6P161 138 aaKnown RBP11.06□□□□□ -0.64
PHRF1-204ENST00000532550 C20orf78Q9BR46 151 aa11.06□□□□□ -0.64
PHRF1-204ENST00000532550 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.06□□□□□ -0.64
PHRF1-204ENST00000532550 CCL25O15444 150 aa11.05□□□□□ -0.64
PHRF1-204ENST00000532550 HBBP68871 147 aa11.05□□□□□ -0.64
PHRF1-204ENST00000532550 FOXI1Q12951 378 aa11.05□□□□□ -0.64
PHRF1-204ENST00000532550 MYCBP2O75592 4640 aa11.05□□□□□ -0.64
PHRF1-204ENST00000532550 TRBV24-1A0A075B6N3 115 aa11.04□□□□□ -0.64
PHRF1-204ENST00000532550 TMEM18Q96B42 140 aa11.04□□□□□ -0.64
PHRF1-204ENST00000532550 PANO1I0J062 215 aa11.03□□□□□ -0.64
PHRF1-204ENST00000532550 CSDC2Q9Y534 153 aaKnown RBP11.03□□□□□ -0.64
PHRF1-204ENST00000532550 GVQW2A0A096LPI5 108 aaPredicted RBP11.02□□□□□ -0.65
PHRF1-204ENST00000532550 J3QL48 77 aa11.02□□□□□ -0.65
PHRF1-204ENST00000532550 TCAPO15273 167 aa11.02□□□□□ -0.65
PHRF1-204ENST00000532550 TNFRSF6BO95407 300 aa11.02□□□□□ -0.65
PHRF1-204ENST00000532550 CD164L2Q6UWJ8 174 aa11.02□□□□□ -0.65
PHRF1-204ENST00000532550 IGHV1-58A0A0C4DH39 117 aa11.01□□□□□ -0.65
PHRF1-204ENST00000532550 A0A1B0GXF2 115 aa11.01□□□□□ -0.65
PHRF1-204ENST00000532550 D6R8Y8 96 aa11.01□□□□□ -0.65
PHRF1-204ENST00000532550 RPL37AP61513 92 aaKnown RBP11.01□□□□□ -0.65
PHRF1-204ENST00000532550 RPL32P62910 135 aaKnown RBP11.01□□□□□ -0.65
PHRF1-204ENST00000532550 UBE2D4Q9Y2X8 147 aa11.01□□□□□ -0.65
PHRF1-204ENST00000532550 C1orf196B1AJZ1 125 aa11□□□□□ -0.65
PHRF1-204ENST00000532550 PPBPP02775 128 aa11□□□□□ -0.65
PHRF1-204ENST00000532550 KRTAP10-4P60372 401 aaPredicted RBP11□□□□□ -0.65
PHRF1-204ENST00000532550 COX6A2Q02221 97 aa11□□□□□ -0.65
PHRF1-204ENST00000532550 PNRC1Q12796 327 aaPredicted RBP11□□□□□ -0.65
PHRF1-204ENST00000532550 CIRBPQ14011 172 aaKnown RBP11□□□□□ -0.65
PHRF1-204ENST00000532550 ATP5L2Q7Z4Y8 100 aa11□□□□□ -0.65
PHRF1-204ENST00000532550 MT-ND4LP03901 98 aa10.99□□□□□ -0.65
PHRF1-204ENST00000532550 ANAPC16Q96DE5 110 aa10.99□□□□□ -0.65
PHRF1-204ENST00000532550 TIMM21Q9BVV7 248 aa10.99□□□□□ -0.65
PHRF1-204ENST00000532550 HERC1Q15751 4861 aa10.98□□□□□ -0.65
PHRF1-204ENST00000532550 ZNF561-AS1K7EIQ3 104 aa10.98□□□□□ -0.65
PHRF1-204ENST00000532550 PHOX2AO14813 284 aa10.98□□□□□ -0.65
PHRF1-204ENST00000532550 CHTF8P0CG12 524 aa10.98□□□□□ -0.65
PHRF1-204ENST00000532550 IFITM2Q01629 132 aa10.98□□□□□ -0.65
PHRF1-204ENST00000532550 TMEM136Q6ZRR5 245 aa10.98□□□□□ -0.65
PHRF1-204ENST00000532550 SMIM2Q9BVW6 85 aa10.98□□□□□ -0.65
PHRF1-204ENST00000532550 A0A087WYN8 130 aa10.97□□□□□ -0.65
PHRF1-204ENST00000532550 TRAV13-1A0A0B4J241 112 aa10.97□□□□□ -0.65
PHRF1-204ENST00000532550 KRTAP29-1A8MX34 341 aaPredicted RBP10.97□□□□□ -0.65
PHRF1-204ENST00000532550 NPYP01303 97 aa10.97□□□□□ -0.65
PHRF1-204ENST00000532550 MALP21145 153 aa10.97□□□□□ -0.65
PHRF1-204ENST00000532550 RNASE13Q5GAN3 156 aaKnown RBP10.97□□□□□ -0.65
PHRF1-204ENST00000532550 ORMDL3Q8N138 153 aa10.97□□□□□ -0.65
PHRF1-204ENST00000532550 PRSS3P2Q8NHM4 247 aa10.97□□□□□ -0.65
PHRF1-204ENST00000532550 SPACA4Q8TDM5 124 aa10.97□□□□□ -0.65
PHRF1-204ENST00000532550 LINC00526Q96FQ7 95 aa10.96□□□□□ -0.65
PHRF1-204ENST00000532550 COX7A2LO14548 114 aa10.95□□□□□ -0.66
PHRF1-204ENST00000532550 RAB5AP20339 215 aa10.95□□□□□ -0.66
PHRF1-204ENST00000532550 RPL39P62891 51 aaKnown RBP10.95□□□□□ -0.66
PHRF1-204ENST00000532550 MAJINQ3KP22 176 aa10.95□□□□□ -0.66
PHRF1-204ENST00000532550 CLLU1Q5K131 121 aa10.95□□□□□ -0.66
PHRF1-204ENST00000532550 PRELID3AQ96N28 172 aa10.95□□□□□ -0.66
PHRF1-204ENST00000532550 PKIGQ9Y2B9 76 aa10.95□□□□□ -0.66
PHRF1-204ENST00000532550 IGKV2-24A0A0C4DH68 120 aa10.94□□□□□ -0.66
PHRF1-204ENST00000532550 Q6ZUT4 128 aa10.94□□□□□ -0.66
PHRF1-204ENST00000532550 SYCNQ0VAF6 134 aa10.93□□□□□ -0.66
PHRF1-204ENST00000532550 CARD19Q96LW7 228 aa10.93□□□□□ -0.66
PHRF1-204ENST00000532550 SPANXA1Q9NS26 97 aa10.93□□□□□ -0.66
PHRF1-204ENST00000532550 PLAC8Q9NZF1 115 aa10.93□□□□□ -0.66
PHRF1-204ENST00000532550 C5orf38Q86SI9 138 aa10.92□□□□□ -0.66
PHRF1-204ENST00000532550 APOMO95445 188 aa10.91□□□□□ -0.66
PHRF1-204ENST00000532550 OXTP01178 125 aa10.91□□□□□ -0.66
PHRF1-204ENST00000532550 LINC00474Q9P2X8 69 aa10.91□□□□□ -0.66
PHRF1-204ENST00000532550 LAMTOR2Q9Y2Q5 125 aa10.91□□□□□ -0.66
PHRF1-204ENST00000532550 IGLV4-69A0A075B6H9 119 aa10.9□□□□□ -0.66
PHRF1-204ENST00000532550 LOC389332A0A1B0GUA5 103 aa10.9□□□□□ -0.66
PHRF1-204ENST00000532550 MRPS36P82909 103 aaKnown RBP10.9□□□□□ -0.66
PHRF1-204ENST00000532550 STPG4Q8N801 248 aa10.9□□□□□ -0.66
PHRF1-204ENST00000532550 C7orf33Q8WU49 177 aa10.9□□□□□ -0.66
PHRF1-204ENST00000532550 OPRPNQ99935 248 aaPredicted RBP10.9□□□□□ -0.66
PHRF1-204ENST00000532550 A0A096LNI7 61 aa10.89□□□□□ -0.67
PHRF1-204ENST00000532550 PRSS47A8MTI9 375 aa10.89□□□□□ -0.67
PHRF1-204ENST00000532550 UQCC3Q6UW78 93 aa10.89□□□□□ -0.67
PHRF1-204ENST00000532550 MAP1LC3AQ9H492 121 aa10.89□□□□□ -0.67
PHRF1-204ENST00000532550 IFI27P40305 119 aaPredicted RBP10.88□□□□□ -0.67
PHRF1-204ENST00000532550 FAM104AQ969W3 186 aa10.88□□□□□ -0.67
PHRF1-204ENST00000532550 CAMK2N2Q96S95 79 aa10.88□□□□□ -0.67
PHRF1-204ENST00000532550 LRP1Q07954 4544 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms