RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 BLCAPP62952 87 aa5.15□□□□□ -1.59
TGFBR3-209ENST00000532540 TEX36Q5VZQ5 186 aa5.15□□□□□ -1.59
TGFBR3-209ENST00000532540 CEMP1Q6PRD7 247 aaPredicted RBP5.15□□□□□ -1.59
TGFBR3-209ENST00000532540 CLEC19AQ6UXS0 136 aa5.15□□□□□ -1.59
TGFBR3-209ENST00000532540 C9orf139Q6ZV77 190 aa5.15□□□□□ -1.59
TGFBR3-209ENST00000532540 TOMM7Q9P0U1 55 aa5.15□□□□□ -1.59
TGFBR3-209ENST00000532540 A0A0J9YXY3 114 aa5.15□□□□□ -1.59
TGFBR3-209ENST00000532540 NDUFC2-KCTD14E9PQ53 114 aa5.15□□□□□ -1.59
TGFBR3-209ENST00000532540 RNF5Q99942 180 aa5.15□□□□□ -1.59
TGFBR3-209ENST00000532540 TRAV12-2A0A075B6T6 113 aa5.14□□□□□ -1.59
TGFBR3-209ENST00000532540 LY6G6DO95868 133 aa5.14□□□□□ -1.59
TGFBR3-209ENST00000532540 IGHV1-69P01742 117 aa5.14□□□□□ -1.59
TGFBR3-209ENST00000532540 TRAV23DV6A0A075B6W5 121 aa5.14□□□□□ -1.59
TGFBR3-209ENST00000532540 F8WDY8 70 aa5.14□□□□□ -1.59
TGFBR3-209ENST00000532540 HAMPP81172 84 aa5.14□□□□□ -1.59
TGFBR3-209ENST00000532540 DAND5Q8N907 189 aa5.14□□□□□ -1.59
TGFBR3-209ENST00000532540 RITA1Q96K30 269 aa5.14□□□□□ -1.59
TGFBR3-209ENST00000532540 NOTCH1P46531 2555 aa5.14□□□□□ -1.59
TGFBR3-209ENST00000532540 NF1P21359 2839 aa5.14□□□□□ -1.59
TGFBR3-209ENST00000532540 SPENQ96T58 3664 aaKnown RBP5.14□□□□□ -1.59
TGFBR3-209ENST00000532540 COX7A2LO14548 114 aa5.14□□□□□ -1.59
TGFBR3-209ENST00000532540 VSIG2Q96IQ7 327 aa5.14□□□□□ -1.59
TGFBR3-209ENST00000532540 PYGO1Q9Y3Y4 419 aa5.14□□□□□ -1.59
TGFBR3-209ENST00000532540 NRACQ8N912 160 aa5.13□□□□□ -1.59
TGFBR3-209ENST00000532540 TRAV13-2A0A0B4J235 113 aa5.13□□□□□ -1.59
TGFBR3-209ENST00000532540 I3L2K1 104 aa5.13□□□□□ -1.59
TGFBR3-209ENST00000532540 TNFRSF13BO14836 293 aaPredicted RBP5.13□□□□□ -1.59
TGFBR3-209ENST00000532540 HOXD3P31249 432 aaPredicted RBP5.13□□□□□ -1.59
TGFBR3-209ENST00000532540 MIAQ16674 131 aa5.13□□□□□ -1.59
TGFBR3-209ENST00000532540 C1orf229Q6ZS94 237 aaPredicted RBP5.13□□□□□ -1.59
TGFBR3-209ENST00000532540 SERP1Q9Y6X1 66 aa5.13□□□□□ -1.59
TGFBR3-209ENST00000532540 NBPF19A0A087WUL8 3843 aa5.13□□□□□ -1.59
TGFBR3-209ENST00000532540 IGKV3-20P01619 116 aa5.13□□□□□ -1.59
TGFBR3-209ENST00000532540 IGHV4-31P0DP07 118 aa5.13□□□□□ -1.59
TGFBR3-209ENST00000532540 LINC00158P58513 81 aa5.13□□□□□ -1.59
TGFBR3-209ENST00000532540 LINC00311Q8N616 119 aa5.13□□□□□ -1.59
TGFBR3-209ENST00000532540 PAX4O43316 350 aa5.12□□□□□ -1.59
TGFBR3-209ENST00000532540 IGHV3-30-3P0DP02 117 aa5.12□□□□□ -1.59
TGFBR3-209ENST00000532540 CSMD2Q7Z408 3487 aa5.12□□□□□ -1.59
TGFBR3-209ENST00000532540 CELSR1Q9NYQ6 3014 aa5.12□□□□□ -1.59
TGFBR3-209ENST00000532540 OVOL3O00110 214 aa5.12□□□□□ -1.59
TGFBR3-209ENST00000532540 HOXB4P17483 251 aaPredicted RBP5.12□□□□□ -1.59
TGFBR3-209ENST00000532540 MRPL55Q7Z7F7 128 aaKnown RBP5.12□□□□□ -1.59
TGFBR3-209ENST00000532540 HRNRQ86YZ3 2850 aaPredicted RBP5.12□□□□□ -1.59
TGFBR3-209ENST00000532540 SVEP1Q4LDE5 3571 aa5.12□□□□□ -1.59
TGFBR3-209ENST00000532540 K7EIM0 57 aa5.12□□□□□ -1.59
TGFBR3-209ENST00000532540 C15orf32Q32M92 178 aa5.12□□□□□ -1.59
TGFBR3-209ENST00000532540 FANCD2OSQ96PS1 177 aa5.12□□□□□ -1.59
TGFBR3-209ENST00000532540 C14orf132Q9NPU4 83 aa5.12□□□□□ -1.59
TGFBR3-209ENST00000532540 TIRAPP58753 221 aa5.11□□□□□ -1.59
TGFBR3-209ENST00000532540 MPLKIPQ8TAP9 179 aa5.11□□□□□ -1.59
TGFBR3-209ENST00000532540 CNFNQ9BYD5 112 aa5.11□□□□□ -1.59
TGFBR3-209ENST00000532540 U3KQE9 123 aa5.11□□□□□ -1.59
TGFBR3-209ENST00000532540 BSNQ9UPA5 3926 aa5.11□□□□□ -1.59
TGFBR3-209ENST00000532540 ZFHX3Q15911 3703 aa5.11□□□□□ -1.59
TGFBR3-209ENST00000532540 PRAC2D3DTV9 90 aa5.11□□□□□ -1.59
TGFBR3-209ENST00000532540 UBE2L6O14933 153 aa5.11□□□□□ -1.59
TGFBR3-209ENST00000532540 KAAG1Q9UBP8 84 aa5.11□□□□□ -1.59
TGFBR3-209ENST00000532540 TMEM223A0PJW6 202 aa5.11□□□□□ -1.59
TGFBR3-209ENST00000532540 F6UB75 175 aa5.11□□□□□ -1.59
TGFBR3-209ENST00000532540 PF4P02776 101 aa5.11□□□□□ -1.59
TGFBR3-209ENST00000532540 DEFB136Q30KP8 78 aa5.11□□□□□ -1.59
TGFBR3-209ENST00000532540 LAMTOR3Q9UHA4 124 aa5.11□□□□□ -1.59
TGFBR3-209ENST00000532540 CGB3P0DN86 165 aa5.1□□□□□ -1.59
TGFBR3-209ENST00000532540 CGB7P0DN87 165 aa5.1□□□□□ -1.59
TGFBR3-209ENST00000532540 Q9H8V8 135 aa5.1□□□□□ -1.59
TGFBR3-209ENST00000532540 Q9HAA7 133 aa5.1□□□□□ -1.59
TGFBR3-209ENST00000532540 LENEPQ9Y5L5 61 aa5.1□□□□□ -1.59
TGFBR3-209ENST00000532540 IGKV3OR2-268A0A0C4DH90 116 aa5.1□□□□□ -1.59
TGFBR3-209ENST00000532540 H0YGX0 51 aa5.1□□□□□ -1.59
TGFBR3-209ENST00000532540 TIMM17BO60830 172 aa5.1□□□□□ -1.59
TGFBR3-209ENST00000532540 FAM110DQ8TAY7 271 aaPredicted RBP5.1□□□□□ -1.59
TGFBR3-209ENST00000532540 IGHV1-58A0A0C4DH39 117 aa5.1□□□□□ -1.59
TGFBR3-209ENST00000532540 PAX8Q06710 450 aa5.1□□□□□ -1.59
TGFBR3-209ENST00000532540 RNASE13Q5GAN3 156 aaKnown RBP5.1□□□□□ -1.59
TGFBR3-209ENST00000532540 Q6JHZ5 121 aa5.1□□□□□ -1.59
TGFBR3-209ENST00000532540 TMEM61Q8N0U2 210 aa5.1□□□□□ -1.59
TGFBR3-209ENST00000532540 TMEM86BQ8N661 226 aa5.1□□□□□ -1.59
TGFBR3-209ENST00000532540 IGLV2-23P01705 113 aa5.09□□□□□ -1.59
TGFBR3-209ENST00000532540 SUMO4Q6EEV6 95 aa5.09□□□□□ -1.59
TGFBR3-209ENST00000532540 ORMDL1Q9P0S3 153 aa5.09□□□□□ -1.59
TGFBR3-209ENST00000532540 IGLV2-18A0A075B6J9 118 aa5.09□□□□□ -1.59
TGFBR3-209ENST00000532540 ATP6V0E1O15342 81 aa5.09□□□□□ -1.59
TGFBR3-209ENST00000532540 GNRH2O43555 120 aa5.09□□□□□ -1.59
TGFBR3-209ENST00000532540 MRPS36P82909 103 aaKnown RBP5.09□□□□□ -1.59
TGFBR3-209ENST00000532540 EBI3Q14213 229 aa5.09□□□□□ -1.59
TGFBR3-209ENST00000532540 MRPL53Q96EL3 112 aaKnown RBP5.09□□□□□ -1.59
TGFBR3-209ENST00000532540 OPRPNQ99935 248 aaPredicted RBP5.09□□□□□ -1.59
TGFBR3-209ENST00000532540 FSTL3O95633 263 aa5.09□□□□□ -1.6
TGFBR3-209ENST00000532540 ATP5EP2Q5VTU8 51 aa5.09□□□□□ -1.6
TGFBR3-209ENST00000532540 C10orf99Q6UWK7 81 aa5.09□□□□□ -1.6
TGFBR3-209ENST00000532540 DYNLRB2Q8TF09 96 aa5.09□□□□□ -1.6
TGFBR3-209ENST00000532540 RAI1Q7Z5J4 1906 aaPredicted RBP5.08□□□□□ -1.6
TGFBR3-209ENST00000532540 A0A087WVE0 104 aa5.08□□□□□ -1.6
TGFBR3-209ENST00000532540 NXPH4O95158 308 aa5.08□□□□□ -1.6
TGFBR3-209ENST00000532540 DAD1P61803 113 aa5.08□□□□□ -1.6
TGFBR3-209ENST00000532540 RPL36AP83881 106 aaKnown RBP5.08□□□□□ -1.6
TGFBR3-209ENST00000532540 RPL36ALQ969Q0 106 aaKnown RBP5.08□□□□□ -1.6
TGFBR3-209ENST00000532540 IGHV3-73A0A0B4J1V6 119 aa5.08□□□□□ -1.6
TGFBR3-209ENST00000532540 FBN2P35556 2912 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms