RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	BTF3L4	Q96K17	158 aa		11.37	□□□□□ -0.59
CTSB-223	ENST00000532370	RPS10P5	Q9NQ39	176 aa		11.37	□□□□□ -0.59
CTSB-223	ENST00000532370	TRBV24-1	A0A075B6N3	115 aa		11.36	□□□□□ -0.59
CTSB-223	ENST00000532370	TNFRSF6B	O95407	300 aa		11.36	□□□□□ -0.59
CTSB-223	ENST00000532370	PRSS1	P07477	247 aa		11.36	□□□□□ -0.59
CTSB-223	ENST00000532370	FCER1G	P30273	86 aa		11.36	□□□□□ -0.59
CTSB-223	ENST00000532370	NPY	P01303	97 aa		11.35	□□□□□ -0.59
CTSB-223	ENST00000532370	C14orf177	Q52M58	125 aa		11.35	□□□□□ -0.59
CTSB-223	ENST00000532370	C20orf78	Q9BR46	151 aa		11.35	□□□□□ -0.59
CTSB-223	ENST00000532370	VPS13B	Q7Z7G8	4022 aa		11.34	□□□□□ -0.59
CTSB-223	ENST00000532370	ZNF25	P17030	456 aa	Predicted RBP	11.34	□□□□□ -0.59
CTSB-223	ENST00000532370	OR5A1	Q8NGJ0	315 aa		11.34	□□□□□ -0.59
CTSB-223	ENST00000532370	KIR2DL4	Q99706	377 aa		11.34	□□□□□ -0.59
CTSB-223	ENST00000532370	GAGE12H	A6NDE8	117 aa		11.33	□□□□□ -0.6
CTSB-223	ENST00000532370	S100P	P25815	95 aa		11.33	□□□□□ -0.6
CTSB-223	ENST00000532370	MRPL52	Q86TS9	123 aa	Known RBP	11.33	□□□□□ -0.6
CTSB-223	ENST00000532370	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.33	□□□□□ -0.6
CTSB-223	ENST00000532370	TMEM101	Q96IK0	257 aa		11.33	□□□□□ -0.6
CTSB-223	ENST00000532370	SMR3B	P02814	79 aa	Predicted RBP	11.32	□□□□□ -0.6
CTSB-223	ENST00000532370	RPL32	P62910	135 aa	Known RBP	11.32	□□□□□ -0.6
CTSB-223	ENST00000532370	TMEM136	Q6ZRR5	245 aa		11.32	□□□□□ -0.6
CTSB-223	ENST00000532370	CDC42SE2	Q9NRR3	84 aa		11.32	□□□□□ -0.6
CTSB-223	ENST00000532370	PPBP	P02775	128 aa		11.31	□□□□□ -0.6
CTSB-223	ENST00000532370		Q6ZSA8	131 aa		11.31	□□□□□ -0.6
CTSB-223	ENST00000532370	ORMDL3	Q8N138	153 aa		11.31	□□□□□ -0.6
CTSB-223	ENST00000532370	PRELID3A	Q96N28	172 aa		11.31	□□□□□ -0.6
CTSB-223	ENST00000532370	SMIM2	Q9BVW6	85 aa		11.31	□□□□□ -0.6
CTSB-223	ENST00000532370	ZNF664	Q8N3J9	261 aa		11.3	□□□□□ -0.6
CTSB-223	ENST00000532370	UBE2D4	Q9Y2X8	147 aa		11.3	□□□□□ -0.6
CTSB-223	ENST00000532370	LINC00959	A0A1B0GUT2	108 aa		11.29	□□□□□ -0.6
CTSB-223	ENST00000532370	PHOX2A	O14813	284 aa		11.29	□□□□□ -0.6
CTSB-223	ENST00000532370	TCAP	O15273	167 aa		11.29	□□□□□ -0.6
CTSB-223	ENST00000532370	RNASE13	Q5GAN3	156 aa	Known RBP	11.29	□□□□□ -0.6
CTSB-223	ENST00000532370	hDV102S1	A0JD36	115 aa		11.28	□□□□□ -0.6
CTSB-223	ENST00000532370	SLPI	P03973	132 aa		11.28	□□□□□ -0.6
CTSB-223	ENST00000532370	XCL1	P47992	114 aa		11.28	□□□□□ -0.6
CTSB-223	ENST00000532370	RPL39	P62891	51 aa	Known RBP	11.28	□□□□□ -0.6
CTSB-223	ENST00000532370	FOXI1	Q12951	378 aa		11.28	□□□□□ -0.6
CTSB-223	ENST00000532370	DGAT2L7P	Q6IED9	249 aa		11.28	□□□□□ -0.6
CTSB-223	ENST00000532370	YPEL4	Q96NS1	127 aa		11.28	□□□□□ -0.6
CTSB-223	ENST00000532370	CCL25	O15444	150 aa		11.27	□□□□□ -0.61
CTSB-223	ENST00000532370	COX19	Q49B96	90 aa		11.27	□□□□□ -0.61
CTSB-223	ENST00000532370	C15orf56	Q8N910	161 aa		11.27	□□□□□ -0.61
CTSB-223	ENST00000532370	LOC389332	A0A1B0GUA5	103 aa		11.26	□□□□□ -0.61
CTSB-223	ENST00000532370	EPM2A	B3EWF7	344 aa		11.26	□□□□□ -0.61
CTSB-223	ENST00000532370	GNB1L	Q9BYB4	327 aa		11.26	□□□□□ -0.61
CTSB-223	ENST00000532370	CSDC2	Q9Y534	153 aa	Known RBP	11.26	□□□□□ -0.61
CTSB-223	ENST00000532370	HIGD2B	Q4VC39	106 aa		11.25	□□□□□ -0.61
CTSB-223	ENST00000532370		Q6ZUT4	128 aa		11.25	□□□□□ -0.61
CTSB-223	ENST00000532370	FAM104A	Q969W3	186 aa		11.25	□□□□□ -0.61
CTSB-223	ENST00000532370	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.24	□□□□□ -0.61
CTSB-223	ENST00000532370		Q5VSD8	79 aa		11.24	□□□□□ -0.61
CTSB-223	ENST00000532370	SCX	Q7RTU7	201 aa		11.24	□□□□□ -0.61
CTSB-223	ENST00000532370	C9orf163	Q8N9P6	203 aa		11.24	□□□□□ -0.61
CTSB-223	ENST00000532370	TMEM18	Q96B42	140 aa		11.24	□□□□□ -0.61
CTSB-223	ENST00000532370	OPRPN	Q99935	248 aa	Predicted RBP	11.24	□□□□□ -0.61
CTSB-223	ENST00000532370	SMCO4	Q9NRQ5	59 aa		11.24	□□□□□ -0.61
CTSB-223	ENST00000532370	TRAV13-1	A0A0B4J241	112 aa		11.23	□□□□□ -0.61
CTSB-223	ENST00000532370	PRSS47	A8MTI9	375 aa		11.23	□□□□□ -0.61
CTSB-223	ENST00000532370	MT-ND6	P03923	174 aa		11.23	□□□□□ -0.61
CTSB-223	ENST00000532370	CNBP	P62633	177 aa	Known RBP	11.23	□□□□□ -0.61
CTSB-223	ENST00000532370	SS18	Q15532	418 aa		11.23	□□□□□ -0.61
CTSB-223	ENST00000532370	CFAP161	Q6P656	301 aa		11.23	□□□□□ -0.61
CTSB-223	ENST00000532370	CBLN2	Q8IUK8	224 aa		11.23	□□□□□ -0.61
CTSB-223	ENST00000532370	CHAC1	Q9BUX1	264 aa		11.23	□□□□□ -0.61
CTSB-223	ENST00000532370	TIMM21	Q9BVV7	248 aa		11.23	□□□□□ -0.61
CTSB-223	ENST00000532370	LAMTOR2	Q9Y2Q5	125 aa		11.23	□□□□□ -0.61
CTSB-223	ENST00000532370	RAB5A	P20339	215 aa		11.22	□□□□□ -0.61
CTSB-223	ENST00000532370	SMAGP	Q0VAQ4	97 aa		11.22	□□□□□ -0.61
CTSB-223	ENST00000532370	KIAA1644	Q3SXP7	199 aa		11.22	□□□□□ -0.61
CTSB-223	ENST00000532370	CD164L2	Q6UWJ8	174 aa		11.22	□□□□□ -0.61
CTSB-223	ENST00000532370	MAP1LC3A	Q9H492	121 aa		11.22	□□□□□ -0.61
CTSB-223	ENST00000532370	AP5S1	Q9NUS5	200 aa		11.22	□□□□□ -0.61
CTSB-223	ENST00000532370	SDIM1	Q6ZPB5	146 aa		11.21	□□□□□ -0.61
CTSB-223	ENST00000532370	C1orf196	B1AJZ1	125 aa		11.2	□□□□□ -0.62
CTSB-223	ENST00000532370	PANO1	I0J062	215 aa		11.2	□□□□□ -0.62
CTSB-223	ENST00000532370		Q8N8P6	123 aa		11.2	□□□□□ -0.62
CTSB-223	ENST00000532370	CIRBP-AS1	Q8TBR5	109 aa		11.2	□□□□□ -0.62
CTSB-223	ENST00000532370	SPANXA1	Q9NS26	97 aa		11.2	□□□□□ -0.62
CTSB-223	ENST00000532370	SRRM2	Q9UQ35	2752 aa	Known RBP	11.2	□□□□□ -0.62
CTSB-223	ENST00000532370	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.19	□□□□□ -0.62
CTSB-223	ENST00000532370	LINC00526	Q96FQ7	95 aa		11.19	□□□□□ -0.62
CTSB-223	ENST00000532370	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.19	□□□□□ -0.62
CTSB-223	ENST00000532370	FAM229A	H3BQW9	127 aa		11.18	□□□□□ -0.62
CTSB-223	ENST00000532370	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.17	□□□□□ -0.62
CTSB-223	ENST00000532370	IFI27	P40305	119 aa	Predicted RBP	11.17	□□□□□ -0.62
CTSB-223	ENST00000532370	MRPS36	P82909	103 aa	Known RBP	11.17	□□□□□ -0.62
CTSB-223	ENST00000532370	MRPL18	Q9H0U6	180 aa	Known RBP	11.17	□□□□□ -0.62
CTSB-223	ENST00000532370	MYCBP2	O75592	4640 aa		11.16	□□□□□ -0.62
CTSB-223	ENST00000532370	IGHV3-64	A0A075B6Q5	118 aa		11.16	□□□□□ -0.62
CTSB-223	ENST00000532370	IGHV1-58	A0A0C4DH39	117 aa		11.16	□□□□□ -0.62
CTSB-223	ENST00000532370	C5orf38	Q86SI9	138 aa		11.16	□□□□□ -0.62
CTSB-223	ENST00000532370	LINC00528	Q8N1L1	170 aa		11.16	□□□□□ -0.62
CTSB-223	ENST00000532370	COX7A2L	O14548	114 aa		11.15	□□□□□ -0.62
CTSB-223	ENST00000532370	ATP6V1G1	O75348	118 aa		11.15	□□□□□ -0.62
CTSB-223	ENST00000532370	S100A1	P23297	94 aa		11.15	□□□□□ -0.62
CTSB-223	ENST00000532370	TRAPPC1	Q9Y5R8	145 aa		11.15	□□□□□ -0.62
CTSB-223	ENST00000532370	IGLV4-3	A0A075B6K6	122 aa		11.14	□□□□□ -0.63
CTSB-223	ENST00000532370	CHTF8	P0CG12	524 aa		11.14	□□□□□ -0.63
CTSB-223	ENST00000532370	MAL	P21145	153 aa		11.14	□□□□□ -0.63

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