RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 CKS2P33552 79 aa8.14□□□□□ -1.11
C11orf54-210ENST00000531516 POLR2KP53803 58 aaKnown RBP8.14□□□□□ -1.11
C11orf54-210ENST00000531516 FAM104BQ5XKR9 115 aa8.14□□□□□ -1.11
C11orf54-210ENST00000531516 RNF185Q96GF1 192 aa8.14□□□□□ -1.11
C11orf54-210ENST00000531516 ESDP10768 282 aa8.13□□□□□ -1.11
C11orf54-210ENST00000531516 RPS10P46783 165 aaKnown RBP8.13□□□□□ -1.11
C11orf54-210ENST00000531516 HBBP68871 147 aa8.13□□□□□ -1.11
C11orf54-210ENST00000531516 MRPL52Q86TS9 123 aaKnown RBP8.13□□□□□ -1.11
C11orf54-210ENST00000531516 C20orf78Q9BR46 151 aa8.13□□□□□ -1.11
C11orf54-210ENST00000531516 SRRM2Q9UQ35 2752 aaKnown RBP8.12□□□□□ -1.11
C11orf54-210ENST00000531516 CCL25O15444 150 aa8.12□□□□□ -1.11
C11orf54-210ENST00000531516 XCL1P47992 114 aa8.12□□□□□ -1.11
C11orf54-210ENST00000531516 ZNF664Q8N3J9 261 aa8.12□□□□□ -1.11
C11orf54-210ENST00000531516 LINC00959A0A1B0GUT2 108 aa8.11□□□□□ -1.11
C11orf54-210ENST00000531516 SMKR1H3BMG3 65 aa8.11□□□□□ -1.11
C11orf54-210ENST00000531516 PPBPP02775 128 aa8.11□□□□□ -1.11
C11orf54-210ENST00000531516 PNRC1Q12796 327 aaPredicted RBP8.11□□□□□ -1.11
C11orf54-210ENST00000531516 MRPL51Q4U2R6 128 aaKnown RBP8.11□□□□□ -1.11
C11orf54-210ENST00000531516 SDIM1Q6ZPB5 146 aa8.11□□□□□ -1.11
C11orf54-210ENST00000531516 IGHV1-58A0A0C4DH39 117 aa8.1□□□□□ -1.11
C11orf54-210ENST00000531516 C1orf196B1AJZ1 125 aa8.1□□□□□ -1.11
C11orf54-210ENST00000531516 ZNF561-AS1K7EIQ3 104 aa8.1□□□□□ -1.11
C11orf54-210ENST00000531516 GAS8-AS1O95177 125 aa8.1□□□□□ -1.11
C11orf54-210ENST00000531516 MT-ND4LP03901 98 aa8.1□□□□□ -1.11
C11orf54-210ENST00000531516 MALP21145 153 aa8.1□□□□□ -1.11
C11orf54-210ENST00000531516 RPL37AP61513 92 aaKnown RBP8.1□□□□□ -1.11
C11orf54-210ENST00000531516 HIGD2BQ4VC39 106 aa8.1□□□□□ -1.11
C11orf54-210ENST00000531516 MRPL54Q6P161 138 aaKnown RBP8.1□□□□□ -1.11
C11orf54-210ENST00000531516 ATP5L2Q7Z4Y8 100 aa8.1□□□□□ -1.11
C11orf54-210ENST00000531516 CDC42SE2Q9NRR3 84 aa8.1□□□□□ -1.11
C11orf54-210ENST00000531516 CSDC2Q9Y534 153 aaKnown RBP8.1□□□□□ -1.11
C11orf54-210ENST00000531516 GVQW2A0A096LPI5 108 aaPredicted RBP8.09□□□□□ -1.11
C11orf54-210ENST00000531516 PHOX2AO14813 284 aa8.09□□□□□ -1.11
C11orf54-210ENST00000531516 RAB5AP20339 215 aa8.09□□□□□ -1.11
C11orf54-210ENST00000531516 RPL32P62910 135 aaKnown RBP8.09□□□□□ -1.11
C11orf54-210ENST00000531516 CD164L2Q6UWJ8 174 aa8.09□□□□□ -1.11
C11orf54-210ENST00000531516 NRACQ8N912 160 aa8.09□□□□□ -1.11
C11orf54-210ENST00000531516 TRBV24-1A0A075B6N3 115 aa8.08□□□□□ -1.12
C11orf54-210ENST00000531516 TNFRSF6BO95407 300 aa8.08□□□□□ -1.12
C11orf54-210ENST00000531516 FOXI1Q12951 378 aa8.08□□□□□ -1.12
C11orf54-210ENST00000531516 C15orf56Q8N910 161 aa8.08□□□□□ -1.12
C11orf54-210ENST00000531516 C7orf33Q8WU49 177 aa8.08□□□□□ -1.12
C11orf54-210ENST00000531516 LINC00474Q9P2X8 69 aa8.08□□□□□ -1.12
C11orf54-210ENST00000531516 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.08□□□□□ -1.12
C11orf54-210ENST00000531516 FAT1Q14517 4588 aa8.08□□□□□ -1.12
C11orf54-210ENST00000531516 D6R8Y8 96 aa8.07□□□□□ -1.12
C11orf54-210ENST00000531516 COX7A2LO14548 114 aa8.07□□□□□ -1.12
C11orf54-210ENST00000531516 APOMO95445 188 aa8.07□□□□□ -1.12
C11orf54-210ENST00000531516 UQCC3Q6UW78 93 aa8.07□□□□□ -1.12
C11orf54-210ENST00000531516 ORMDL3Q8N138 153 aa8.07□□□□□ -1.12
C11orf54-210ENST00000531516 ANAPC16Q96DE5 110 aa8.07□□□□□ -1.12
C11orf54-210ENST00000531516 TIMM21Q9BVV7 248 aa8.07□□□□□ -1.12
C11orf54-210ENST00000531516 COX6A2Q02221 97 aa8.06□□□□□ -1.12
C11orf54-210ENST00000531516 COMMD7Q86VX2 200 aa8.06□□□□□ -1.12
C11orf54-210ENST00000531516 SMIM2Q9BVW6 85 aa8.06□□□□□ -1.12
C11orf54-210ENST00000531516 UBE2D4Q9Y2X8 147 aa8.06□□□□□ -1.12
C11orf54-210ENST00000531516 TRAV13-1A0A0B4J241 112 aa8.05□□□□□ -1.12
C11orf54-210ENST00000531516 A0A1B0GXF2 115 aa8.05□□□□□ -1.12
C11orf54-210ENST00000531516 CIRBPQ14011 172 aaKnown RBP8.05□□□□□ -1.12
C11orf54-210ENST00000531516 MAJINQ3KP22 176 aa8.05□□□□□ -1.12
C11orf54-210ENST00000531516 TMEM136Q6ZRR5 245 aa8.05□□□□□ -1.12
C11orf54-210ENST00000531516 CARD19Q96LW7 228 aa8.05□□□□□ -1.12
C11orf54-210ENST00000531516 SPANXA1Q9NS26 97 aa8.05□□□□□ -1.12
C11orf54-210ENST00000531516 DMBT1Q9UGM3 2413 aaPredicted RBP8.05□□□□□ -1.12
C11orf54-210ENST00000531516 A0A087WYN8 130 aa8.04□□□□□ -1.12
C11orf54-210ENST00000531516 TMEM218A2RU14 115 aa8.04□□□□□ -1.12
C11orf54-210ENST00000531516 KRTAP29-1A8MX34 341 aaPredicted RBP8.04□□□□□ -1.12
C11orf54-210ENST00000531516 SLPIP03973 132 aa8.04□□□□□ -1.12
C11orf54-210ENST00000531516 ADCYAP1P18509 176 aa8.04□□□□□ -1.12
C11orf54-210ENST00000531516 SYCNQ0VAF6 134 aa8.04□□□□□ -1.12
C11orf54-210ENST00000531516 SPACA4Q8TDM5 124 aa8.04□□□□□ -1.12
C11orf54-210ENST00000531516 PRELID3AQ96N28 172 aa8.04□□□□□ -1.12
C11orf54-210ENST00000531516 LAMTOR2Q9Y2Q5 125 aa8.04□□□□□ -1.12
C11orf54-210ENST00000531516 IGKV2-24A0A0C4DH68 120 aa8.03□□□□□ -1.12
C11orf54-210ENST00000531516 OXTP01178 125 aa8.03□□□□□ -1.12
C11orf54-210ENST00000531516 NPYP01303 97 aa8.03□□□□□ -1.12
C11orf54-210ENST00000531516 IFI27P40305 119 aaPredicted RBP8.03□□□□□ -1.12
C11orf54-210ENST00000531516 MAP1LC3AQ9H492 121 aa8.03□□□□□ -1.12
C11orf54-210ENST00000531516 VPS13BQ7Z7G8 4022 aa8.02□□□□□ -1.13
C11orf54-210ENST00000531516 CHTF8P0CG12 524 aa8.02□□□□□ -1.13
C11orf54-210ENST00000531516 RNASE13Q5GAN3 156 aaKnown RBP8.02□□□□□ -1.13
C11orf54-210ENST00000531516 IFITM10A6NMD0 228 aa8.01□□□□□ -1.13
C11orf54-210ENST00000531516 G0S2P27469 103 aa8.01□□□□□ -1.13
C11orf54-210ENST00000531516 MRPS36P82909 103 aaKnown RBP8.01□□□□□ -1.13
C11orf54-210ENST00000531516 Q6ZUT4 128 aa8.01□□□□□ -1.13
C11orf54-210ENST00000531516 STPG4Q8N801 248 aa8.01□□□□□ -1.13
C11orf54-210ENST00000531516 PRSS3P2Q8NHM4 247 aa8.01□□□□□ -1.13
C11orf54-210ENST00000531516 CAMK2N2Q96S95 79 aa8.01□□□□□ -1.13
C11orf54-210ENST00000531516 PLAC8Q9NZF1 115 aa8.01□□□□□ -1.13
C11orf54-210ENST00000531516 IGLV4-69A0A075B6H9 119 aa8□□□□□ -1.13
C11orf54-210ENST00000531516 TGIF2-C20orf24A0A0A6YYL0 155 aa8□□□□□ -1.13
C11orf54-210ENST00000531516 PANO1I0J062 215 aa8□□□□□ -1.13
C11orf54-210ENST00000531516 RPL39P62891 51 aaKnown RBP8□□□□□ -1.13
C11orf54-210ENST00000531516 Q6ZN92 141 aa8□□□□□ -1.13
C11orf54-210ENST00000531516 C5orf38Q86SI9 138 aa8□□□□□ -1.13
C11orf54-210ENST00000531516 SEC11CQ9BY50 192 aa8□□□□□ -1.13
C11orf54-210ENST00000531516 CTDSP1Q9GZU7 261 aa8□□□□□ -1.13
C11orf54-210ENST00000531516 FLG2Q5D862 2391 aaPredicted RBP8□□□□□ -1.13
C11orf54-210ENST00000531516 DNAH8Q96JB1 4490 aa7.99□□□□□ -1.13
C11orf54-210ENST00000531516 LOC107984640A0A0U1RRK4 108 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms