RNA–Protein interactions for RNA: ENST00000530887.5

PSMC3-208, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 891 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-208ENST00000530887 ST20Q9HBF5 79 aa11.4□□□□□ -0.58
PSMC3-208ENST00000530887 GATCO43716 136 aaKnown RBP11.39□□□□□ -0.59
PSMC3-208ENST00000530887 FOXA3P55318 350 aaPredicted RBP11.39□□□□□ -0.59
PSMC3-208ENST00000530887 MRPL52Q86TS9 123 aaKnown RBP11.39□□□□□ -0.59
PSMC3-208ENST00000530887 OCC1Q8TAD7 63 aa11.39□□□□□ -0.59
PSMC3-208ENST00000530887 PPP1R17O96001 155 aa11.38□□□□□ -0.59
PSMC3-208ENST00000530887 ESDP10768 282 aa11.38□□□□□ -0.59
PSMC3-208ENST00000530887 SYCNQ0VAF6 134 aa11.38□□□□□ -0.59
PSMC3-208ENST00000530887 LYPD6BQ8NI32 183 aa11.38□□□□□ -0.59
PSMC3-208ENST00000530887 K7EN84 100 aa11.37□□□□□ -0.59
PSMC3-208ENST00000530887 LRP2P98164 4655 aa11.37□□□□□ -0.59
PSMC3-208ENST00000530887 C7orf77A4D0Y5 90 aa11.36□□□□□ -0.59
PSMC3-208ENST00000530887 FAM231BA6NCW3 169 aa11.36□□□□□ -0.59
PSMC3-208ENST00000530887 CDC42SE2Q9NRR3 84 aa11.36□□□□□ -0.59
PSMC3-208ENST00000530887 TRBV27A0A0K0K1C4 114 aa11.35□□□□□ -0.59
PSMC3-208ENST00000530887 LOC107984640A0A0U1RRK4 108 aa11.35□□□□□ -0.59
PSMC3-208ENST00000530887 C1orf196B1AJZ1 125 aa11.35□□□□□ -0.59
PSMC3-208ENST00000530887 CAMPP49913 170 aa11.35□□□□□ -0.59
PSMC3-208ENST00000530887 TCTE3Q8IZS6 198 aa11.35□□□□□ -0.59
PSMC3-208ENST00000530887 ZNF664Q8N3J9 261 aa11.35□□□□□ -0.59
PSMC3-208ENST00000530887 TMEM191AQ9H0A3 160 aa11.35□□□□□ -0.59
PSMC3-208ENST00000530887 CSDC2Q9Y534 153 aaKnown RBP11.35□□□□□ -0.59
PSMC3-208ENST00000530887 MALP21145 153 aa11.34□□□□□ -0.59
PSMC3-208ENST00000530887 KRTAP10-8P60410 259 aa11.34□□□□□ -0.59
PSMC3-208ENST00000530887 BLOC1S1P78537 153 aa11.34□□□□□ -0.59
PSMC3-208ENST00000530887 IGLV4-69A0A075B6H9 119 aa11.33□□□□□ -0.6
PSMC3-208ENST00000530887 A0A1B0GUT8 65 aa11.33□□□□□ -0.6
PSMC3-208ENST00000530887 TSHBP01222 138 aa11.33□□□□□ -0.6
PSMC3-208ENST00000530887 PTTG1IPP53801 180 aa11.33□□□□□ -0.6
PSMC3-208ENST00000530887 SRSF9Q13242 221 aaKnown RBP eCLIP11.33□□□□□ -0.6
PSMC3-208ENST00000530887 VCYO14598 125 aa11.32□□□□□ -0.6
PSMC3-208ENST00000530887 APOMO95445 188 aa11.32□□□□□ -0.6
PSMC3-208ENST00000530887 POLR2KP53803 58 aaKnown RBP11.32□□□□□ -0.6
PSMC3-208ENST00000530887 TSKUQ8WUA8 353 aa11.32□□□□□ -0.6
PSMC3-208ENST00000530887 TMEM18Q96B42 140 aa11.32□□□□□ -0.6
PSMC3-208ENST00000530887 TMEM242Q9NWH2 141 aa11.32□□□□□ -0.6
PSMC3-208ENST00000530887 COX7A2LO14548 114 aa11.31□□□□□ -0.6
PSMC3-208ENST00000530887 FCER1GP30273 86 aa11.31□□□□□ -0.6
PSMC3-208ENST00000530887 C2orf48Q96LS8 159 aa11.31□□□□□ -0.6
PSMC3-208ENST00000530887 KIR2DL4Q99706 377 aa11.31□□□□□ -0.6
PSMC3-208ENST00000530887 F8WDY8 70 aa11.3□□□□□ -0.6
PSMC3-208ENST00000530887 PPP1R2P9O14990 202 aa11.3□□□□□ -0.6
PSMC3-208ENST00000530887 TCAPO15273 167 aa11.3□□□□□ -0.6
PSMC3-208ENST00000530887 HIGD1CA8MV81 97 aa11.29□□□□□ -0.6
PSMC3-208ENST00000530887 CAMK2N2Q96S95 79 aa11.29□□□□□ -0.6
PSMC3-208ENST00000530887 GAGE2BQ13066 116 aa11.28□□□□□ -0.6
PSMC3-208ENST00000530887 RIGQ13278 110 aa11.28□□□□□ -0.6
PSMC3-208ENST00000530887 RNF151Q2KHN1 245 aa11.28□□□□□ -0.6
PSMC3-208ENST00000530887 RAB4AP20338 218 aa11.27□□□□□ -0.61
PSMC3-208ENST00000530887 NUP35Q8NFH5 326 aa11.27□□□□□ -0.61
PSMC3-208ENST00000530887 TIMM21Q9BVV7 248 aa11.27□□□□□ -0.61
PSMC3-208ENST00000530887 OSTCQ9NRP0 149 aa11.27□□□□□ -0.61
PSMC3-208ENST00000530887 LINC00526Q96FQ7 95 aa11.26□□□□□ -0.61
PSMC3-208ENST00000530887 SMIM7Q9BQ49 75 aa11.26□□□□□ -0.61
PSMC3-208ENST00000530887 MT-ND6P03923 174 aa11.25□□□□□ -0.61
PSMC3-208ENST00000530887 SUMO2P61956 95 aaKnown RBP11.25□□□□□ -0.61
PSMC3-208ENST00000530887 OR10D4PQ8NGN7 298 aa11.25□□□□□ -0.61
PSMC3-208ENST00000530887 LINC01551Q86U37 167 aa11.24□□□□□ -0.61
PSMC3-208ENST00000530887 UBE2D4Q9Y2X8 147 aa11.24□□□□□ -0.61
PSMC3-208ENST00000530887 LINC00862A6NCI5 91 aa11.23□□□□□ -0.61
PSMC3-208ENST00000530887 CEBPGP53567 150 aa11.23□□□□□ -0.61
PSMC3-208ENST00000530887 ODF1Q14990 250 aa11.23□□□□□ -0.61
PSMC3-208ENST00000530887 AMN1Q8IY45 258 aa11.23□□□□□ -0.61
PSMC3-208ENST00000530887 IMMP2LQ96T52 175 aa11.23□□□□□ -0.61
PSMC3-208ENST00000530887 PSORS1C2Q9UIG4 136 aa11.23□□□□□ -0.61
PSMC3-208ENST00000530887 C9orf116Q5BN46 136 aaPredicted RBP11.22□□□□□ -0.61
PSMC3-208ENST00000530887 C20orf78Q9BR46 151 aa11.22□□□□□ -0.61
PSMC3-208ENST00000530887 EIF5A2Q9GZV4 153 aaKnown RBP11.22□□□□□ -0.61
PSMC3-208ENST00000530887 TRAV13-1A0A0B4J241 112 aa11.21□□□□□ -0.61
PSMC3-208ENST00000530887 A0A1B0GW15 77 aa11.21□□□□□ -0.61
PSMC3-208ENST00000530887 ZNF727A8MUV8 499 aa11.21□□□□□ -0.61
PSMC3-208ENST00000530887 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.21□□□□□ -0.61
PSMC3-208ENST00000530887 RPL32P62910 135 aaKnown RBP11.21□□□□□ -0.61
PSMC3-208ENST00000530887 RPL18AQ02543 176 aaKnown RBP11.21□□□□□ -0.61
PSMC3-208ENST00000530887 SPAG11BQ08648 103 aa11.21□□□□□ -0.61
PSMC3-208ENST00000530887 DIRC1Q969H9 104 aa11.21□□□□□ -0.61
PSMC3-208ENST00000530887 MRPL35Q9NZE8 188 aaKnown RBP11.21□□□□□ -0.61
PSMC3-208ENST00000530887 NAT8BQ9UHF3 227 aa11.21□□□□□ -0.61
PSMC3-208ENST00000530887 GAS8-AS1O95177 125 aa11.2□□□□□ -0.62
PSMC3-208ENST00000530887 TMEM241Q24JQ0 296 aa11.2□□□□□ -0.62
PSMC3-208ENST00000530887 RNF213Q63HN8 5207 aa11.2□□□□□ -0.62
PSMC3-208ENST00000530887 A0A1W2PNN7 141 aa11.19□□□□□ -0.62
PSMC3-208ENST00000530887 FAM74A3Q4VXF1 159 aa11.19□□□□□ -0.62
PSMC3-208ENST00000530887 C1orf137Q5JT78 98 aa11.18□□□□□ -0.62
PSMC3-208ENST00000530887 ALKAL2Q6UX46 152 aa11.18□□□□□ -0.62
PSMC3-208ENST00000530887 NRACQ8N912 160 aa11.18□□□□□ -0.62
PSMC3-208ENST00000530887 SPANXA1Q9NS26 97 aa11.18□□□□□ -0.62
PSMC3-208ENST00000530887 TRBV24-1A0A075B6N3 115 aa11.17□□□□□ -0.62
PSMC3-208ENST00000530887 NDUFA1O15239 70 aa11.17□□□□□ -0.62
PSMC3-208ENST00000530887 S100A8P05109 93 aa11.17□□□□□ -0.62
PSMC3-208ENST00000530887 C5orf38Q86SI9 138 aa11.17□□□□□ -0.62
PSMC3-208ENST00000530887 TLX1NBP0CAT3 122 aa11.16□□□□□ -0.62
PSMC3-208ENST00000530887 FAM104BQ5XKR9 115 aa11.16□□□□□ -0.62
PSMC3-208ENST00000530887 V9GYV3 84 aa11.16□□□□□ -0.62
PSMC3-208ENST00000530887 MRPS36P82909 103 aaKnown RBP11.15□□□□□ -0.62
PSMC3-208ENST00000530887 Q6ZUT4 128 aa11.15□□□□□ -0.62
PSMC3-208ENST00000530887 AKAP14Q86UN6 197 aa11.15□□□□□ -0.62
PSMC3-208ENST00000530887 SMKR1H3BMG3 65 aa11.14□□□□□ -0.63
PSMC3-208ENST00000530887 IGLV7-43P04211 117 aa11.14□□□□□ -0.63
PSMC3-208ENST00000530887 CKS2P33552 79 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms