RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 NIT2Q9NQR4 276 aa5.55□□□□□ -1.52
VPS11-203ENST00000529545 CYTL1Q9NRR1 136 aa5.55□□□□□ -1.52
VPS11-203ENST00000529545 PSORS1C2Q9UIG4 136 aa5.55□□□□□ -1.52
VPS11-203ENST00000529545 LPAP08519 4548 aa5.54□□□□□ -1.52
VPS11-203ENST00000529545 BCL2L11O43521 198 aa5.54□□□□□ -1.52
VPS11-203ENST00000529545 PAGE4O60829 102 aa5.54□□□□□ -1.52
VPS11-203ENST00000529545 RNASEKQ6P5S7 137 aaKnown RBP5.54□□□□□ -1.52
VPS11-203ENST00000529545 FER1L6-AS1Q8NA97 138 aa5.54□□□□□ -1.52
VPS11-203ENST00000529545 CARD19Q96LW7 228 aa5.54□□□□□ -1.52
VPS11-203ENST00000529545 MLST8Q9BVC4 326 aa5.54□□□□□ -1.52
VPS11-203ENST00000529545 FXYD6-FXYD2A0A087WZ82 144 aa5.53□□□□□ -1.52
VPS11-203ENST00000529545 IGHV1-58A0A0C4DH39 117 aa5.53□□□□□ -1.52
VPS11-203ENST00000529545 ZNF561-AS1K7EIQ3 104 aa5.53□□□□□ -1.52
VPS11-203ENST00000529545 MT-ND6P03923 174 aa5.53□□□□□ -1.52
VPS11-203ENST00000529545 TRGC1P0CF51 173 aa5.53□□□□□ -1.52
VPS11-203ENST00000529545 RPS20P60866 119 aaKnown RBP5.53□□□□□ -1.52
VPS11-203ENST00000529545 XKRY2A2RUG3 117 aa5.52□□□□□ -1.53
VPS11-203ENST00000529545 COLCA2A8K830 154 aa5.52□□□□□ -1.53
VPS11-203ENST00000529545 F2Z2F3 143 aa5.52□□□□□ -1.53
VPS11-203ENST00000529545 APOC3P02656 99 aa5.52□□□□□ -1.53
VPS11-203ENST00000529545 ADCYAP1P18509 176 aa5.52□□□□□ -1.53
VPS11-203ENST00000529545 SYCNQ0VAF6 134 aa5.52□□□□□ -1.53
VPS11-203ENST00000529545 GAGE2BQ13066 116 aa5.52□□□□□ -1.53
VPS11-203ENST00000529545 SEC11CQ9BY50 192 aa5.52□□□□□ -1.53
VPS11-203ENST00000529545 LOC107984640A0A0U1RRK4 108 aa5.51□□□□□ -1.53
VPS11-203ENST00000529545 H7C423 109 aa5.51□□□□□ -1.53
VPS11-203ENST00000529545 SNAPINO95295 136 aa5.51□□□□□ -1.53
VPS11-203ENST00000529545 IGLC6P0CF74 106 aa5.51□□□□□ -1.53
VPS11-203ENST00000529545 XCL1P47992 114 aa5.51□□□□□ -1.53
VPS11-203ENST00000529545 PTTG1IPP53801 180 aa5.51□□□□□ -1.53
VPS11-203ENST00000529545 FOXI1Q12951 378 aa5.51□□□□□ -1.53
VPS11-203ENST00000529545 OR2D3Q8NGH3 330 aa5.51□□□□□ -1.53
VPS11-203ENST00000529545 DIRC1Q969H9 104 aa5.51□□□□□ -1.53
VPS11-203ENST00000529545 ISOC2Q96AB3 205 aa5.51□□□□□ -1.53
VPS11-203ENST00000529545 LINC00526Q96FQ7 95 aa5.51□□□□□ -1.53
VPS11-203ENST00000529545 BTF3L4Q96K17 158 aa5.51□□□□□ -1.53
VPS11-203ENST00000529545 BIN3Q9NQY0 253 aa5.51□□□□□ -1.53
VPS11-203ENST00000529545 KANTRA0A1W2PQU2 76 aa5.5□□□□□ -1.53
VPS11-203ENST00000529545 F8W036 122 aa5.5□□□□□ -1.53
VPS11-203ENST00000529545 NCR2O95944 276 aa5.5□□□□□ -1.53
VPS11-203ENST00000529545 APCSP02743 223 aa5.5□□□□□ -1.53
VPS11-203ENST00000529545 NTF3P20783 257 aa5.5□□□□□ -1.53
VPS11-203ENST00000529545 PRR4Q16378 134 aa5.5□□□□□ -1.53
VPS11-203ENST00000529545 C1orf137Q5JT78 98 aa5.5□□□□□ -1.53
VPS11-203ENST00000529545 SVBPQ8N300 66 aa5.5□□□□□ -1.53
VPS11-203ENST00000529545 PRR26Q8N8Z3 221 aa5.5□□□□□ -1.53
VPS11-203ENST00000529545 OR5A1Q8NGJ0 315 aa5.5□□□□□ -1.53
VPS11-203ENST00000529545 SFT2D1Q8WV19 159 aa5.5□□□□□ -1.53
VPS11-203ENST00000529545 TMEM101Q96IK0 257 aa5.5□□□□□ -1.53
VPS11-203ENST00000529545 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.49□□□□□ -1.53
VPS11-203ENST00000529545 IGKV2-29A2NJV5 120 aaPredicted RBP5.49□□□□□ -1.53
VPS11-203ENST00000529545 CCL25O15444 150 aa5.49□□□□□ -1.53
VPS11-203ENST00000529545 FGF6P10767 208 aa5.49□□□□□ -1.53
VPS11-203ENST00000529545 ZNF25P17030 456 aaPredicted RBP5.49□□□□□ -1.53
VPS11-203ENST00000529545 RPL35P42766 123 aaKnown RBP5.49□□□□□ -1.53
VPS11-203ENST00000529545 SS18Q15532 418 aa5.49□□□□□ -1.53
VPS11-203ENST00000529545 LINC00959A0A1B0GUT2 108 aa5.48□□□□□ -1.53
VPS11-203ENST00000529545 A0A1B0GV50 99 aa5.48□□□□□ -1.53
VPS11-203ENST00000529545 A0A1W2PNN7 141 aa5.48□□□□□ -1.53
VPS11-203ENST00000529545 C5orf52A6NGY3 159 aa5.48□□□□□ -1.53
VPS11-203ENST00000529545 IFNA1P01562 189 aa5.48□□□□□ -1.53
VPS11-203ENST00000529545 CAMPP49913 170 aa5.48□□□□□ -1.53
VPS11-203ENST00000529545 LYZL1Q6UWQ5 148 aa5.48□□□□□ -1.53
VPS11-203ENST00000529545 FAM213BQ8TBF2 198 aa5.48□□□□□ -1.53
VPS11-203ENST00000529545 YPEL4Q96NS1 127 aa5.48□□□□□ -1.53
VPS11-203ENST00000529545 IGLV1-50A0A075B6I6 118 aa5.47□□□□□ -1.53
VPS11-203ENST00000529545 UMAD1C9J7I0 102 aa5.47□□□□□ -1.53
VPS11-203ENST00000529545 MALP21145 153 aa5.47□□□□□ -1.53
VPS11-203ENST00000529545 EIF5AP63241 154 aaKnown RBP5.47□□□□□ -1.53
VPS11-203ENST00000529545 TWIST1Q15672 202 aa5.47□□□□□ -1.53
VPS11-203ENST00000529545 RNF151Q2KHN1 245 aa5.47□□□□□ -1.53
VPS11-203ENST00000529545 C9orf116Q5BN46 136 aaPredicted RBP5.47□□□□□ -1.53
VPS11-203ENST00000529545 EIF5AL1Q6IS14 154 aaKnown RBP5.47□□□□□ -1.53
VPS11-203ENST00000529545 CD164L2Q6UWJ8 174 aa5.47□□□□□ -1.53
VPS11-203ENST00000529545 SMIM15Q7Z3B0 74 aa5.47□□□□□ -1.53
VPS11-203ENST00000529545 TSKUQ8WUA8 353 aa5.47□□□□□ -1.53
VPS11-203ENST00000529545 MBD3L1Q8WWY6 194 aa5.47□□□□□ -1.53
VPS11-203ENST00000529545 C12orf57Q99622 126 aa5.47□□□□□ -1.53
VPS11-203ENST00000529545 IGLV4-69A0A075B6H9 119 aa5.46□□□□□ -1.54
VPS11-203ENST00000529545 TRAV1-1A0A0B4J248 108 aa5.46□□□□□ -1.54
VPS11-203ENST00000529545 C9JQL5 133 aa5.46□□□□□ -1.54
VPS11-203ENST00000529545 APOMO95445 188 aa5.46□□□□□ -1.54
VPS11-203ENST00000529545 IGLV7-43P04211 117 aa5.46□□□□□ -1.54
VPS11-203ENST00000529545 UBE2D1P51668 147 aa5.46□□□□□ -1.54
VPS11-203ENST00000529545 RPL18AQ02543 176 aaKnown RBP5.46□□□□□ -1.54
VPS11-203ENST00000529545 CENPWQ5EE01 88 aa5.46□□□□□ -1.54
VPS11-203ENST00000529545 GATD1Q8NB37 220 aa5.46□□□□□ -1.54
VPS11-203ENST00000529545 CAMK2N2Q96S95 79 aa5.46□□□□□ -1.54
VPS11-203ENST00000529545 A0A087WZ39 114 aa5.45□□□□□ -1.54
VPS11-203ENST00000529545 C19orf71A6NCJ1 209 aa5.45□□□□□ -1.54
VPS11-203ENST00000529545 SDHAF1A6NFY7 115 aa5.45□□□□□ -1.54
VPS11-203ENST00000529545 H0Y9J4 135 aa5.45□□□□□ -1.54
VPS11-203ENST00000529545 I3L3M4 83 aa5.45□□□□□ -1.54
VPS11-203ENST00000529545 S100A8P05109 93 aa5.45□□□□□ -1.54
VPS11-203ENST00000529545 BCL2P10415 239 aa5.45□□□□□ -1.54
VPS11-203ENST00000529545 PMCHP20382 165 aa5.45□□□□□ -1.54
VPS11-203ENST00000529545 GNG4P50150 75 aa5.45□□□□□ -1.54
VPS11-203ENST00000529545 BLOC1S1P78537 153 aa5.45□□□□□ -1.54
VPS11-203ENST00000529545 PEA15Q15121 130 aa5.45□□□□□ -1.54
VPS11-203ENST00000529545 PHF5AQ7RTV0 110 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms