RNA–Protein interactions for RNA: ENST00000529098.5

PDZD3-210, Transcript of PDZ domain containing 3, humanhuman

TSL 2

Gene PDZD3, Length 2,532 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-210ENST00000529098 IGHV3-11P01762 117 aa13.05□□□□□ -0.32
PDZD3-210ENST00000529098 OVOL2Q9BRP0 275 aa13.05□□□□□ -0.32
PDZD3-210ENST00000529098 AKAP6Q13023 2319 aa13.05□□□□□ -0.32
PDZD3-210ENST00000529098 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.04□□□□□ -0.32
PDZD3-210ENST00000529098 A0A0U1RRA0 63 aa13.04□□□□□ -0.32
PDZD3-210ENST00000529098 IGKV2-29A2NJV5 120 aaPredicted RBP13.04□□□□□ -0.32
PDZD3-210ENST00000529098 USP17L23D6RBM5 183 aa13.04□□□□□ -0.32
PDZD3-210ENST00000529098 HRCT1Q6UXD1 115 aa13.04□□□□□ -0.32
PDZD3-210ENST00000529098 SYNJ2BPP57105 145 aa13.04□□□□□ -0.32
PDZD3-210ENST00000529098 FBXL19-AS1Q494R0 122 aa13.04□□□□□ -0.32
PDZD3-210ENST00000529098 ZNF625Q96I27 306 aaPredicted RBP13.04□□□□□ -0.32
PDZD3-210ENST00000529098 SPTAN1Q13813 2472 aaKnown RBP13.04□□□□□ -0.32
PDZD3-210ENST00000529098 IGHV3-73A0A0B4J1V6 119 aa13.03□□□□□ -0.32
PDZD3-210ENST00000529098 RPL28P46779 137 aaKnown RBP13.03□□□□□ -0.32
PDZD3-210ENST00000529098 LINC01561Q8N1V8 128 aa13.03□□□□□ -0.32
PDZD3-210ENST00000529098 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.03□□□□□ -0.32
PDZD3-210ENST00000529098 PF4P02776 101 aa13.03□□□□□ -0.32
PDZD3-210ENST00000529098 MRAPQ8TCY5 172 aa13.03□□□□□ -0.32
PDZD3-210ENST00000529098 LINC00467Q9BRT7 94 aa13.03□□□□□ -0.32
PDZD3-210ENST00000529098 ACACBO00763 2458 aa13.03□□□□□ -0.32
PDZD3-210ENST00000529098 H3BUA1 57 aa13.02□□□□□ -0.32
PDZD3-210ENST00000529098 RS1O15537 224 aa13.02□□□□□ -0.32
PDZD3-210ENST00000529098 IGKV3-20P01619 116 aa13.02□□□□□ -0.32
PDZD3-210ENST00000529098 CFAP46Q8IYW2 2715 aa13.02□□□□□ -0.33
PDZD3-210ENST00000529098 PROK1P58294 105 aa13.02□□□□□ -0.33
PDZD3-210ENST00000529098 OBSCN-AS1Q96MR7 158 aa13.02□□□□□ -0.33
PDZD3-210ENST00000529098 LINC00846Q9NV44 126 aa13.02□□□□□ -0.33
PDZD3-210ENST00000529098 RNF152Q8N8N0 203 aa13.01□□□□□ -0.33
PDZD3-210ENST00000529098 A0A087WVE0 104 aa13.01□□□□□ -0.33
PDZD3-210ENST00000529098 TRAV13-2A0A0B4J235 113 aa13.01□□□□□ -0.33
PDZD3-210ENST00000529098 COX6A2Q02221 97 aa13.01□□□□□ -0.33
PDZD3-210ENST00000529098 C14orf132Q9NPU4 83 aa13.01□□□□□ -0.33
PDZD3-210ENST00000529098 K7EMT4 169 aa13□□□□□ -0.33
PDZD3-210ENST00000529098 SPINK13Q1W4C9 94 aa13□□□□□ -0.33
PDZD3-210ENST00000529098 CACNA1BQ00975 2339 aa13□□□□□ -0.33
PDZD3-210ENST00000529098 NDUFC2-KCTD14E9PQ53 114 aa13□□□□□ -0.33
PDZD3-210ENST00000529098 HOXD3P31249 432 aaPredicted RBP12.99□□□□□ -0.33
PDZD3-210ENST00000529098 C11orf71Q6IPW1 123 aa12.99□□□□□ -0.33
PDZD3-210ENST00000529098 EDN2P20800 178 aa12.98□□□□□ -0.33
PDZD3-210ENST00000529098 NACAE9PAV3 2078 aa12.98□□□□□ -0.33
PDZD3-210ENST00000529098 SNRPD3P62318 126 aaKnown RBP12.98□□□□□ -0.33
PDZD3-210ENST00000529098 MED13LQ71F56 2210 aa12.97□□□□□ -0.33
PDZD3-210ENST00000529098 C9orf129Q5T035 196 aaKnown RBP12.97□□□□□ -0.33
PDZD3-210ENST00000529098 IGSF10Q6WRI0 2623 aa12.97□□□□□ -0.33
PDZD3-210ENST00000529098 SMIM1B2RUZ4 78 aa12.97□□□□□ -0.33
PDZD3-210ENST00000529098 NDUFC2O95298 119 aa12.97□□□□□ -0.33
PDZD3-210ENST00000529098 LINC00242Q5T6M2 205 aa12.97□□□□□ -0.33
PDZD3-210ENST00000529098 DGAT2L7PQ6IED9 249 aa12.96□□□□□ -0.33
PDZD3-210ENST00000529098 Q9UF83 564 aa12.96□□□□□ -0.33
PDZD3-210ENST00000529098 SVEP1Q4LDE5 3571 aa12.96□□□□□ -0.33
PDZD3-210ENST00000529098 IGHV3OR16-12A0A075B7B8 117 aa12.96□□□□□ -0.34
PDZD3-210ENST00000529098 CRPP02741 224 aa12.96□□□□□ -0.34
PDZD3-210ENST00000529098 FAM19A3Q7Z5A8 133 aa12.95□□□□□ -0.34
PDZD3-210ENST00000529098 A0A1W2PPR1 153 aa12.95□□□□□ -0.34
PDZD3-210ENST00000529098 FHL2Q14192 279 aa12.95□□□□□ -0.34
PDZD3-210ENST00000529098 PIK3CD-AS1Q5SR53 167 aa12.95□□□□□ -0.34
PDZD3-210ENST00000529098 Q6ZSN1 163 aa12.94□□□□□ -0.34
PDZD3-210ENST00000529098 ZFYVE26Q68DK2 2539 aa12.94□□□□□ -0.34
PDZD3-210ENST00000529098 A0A087WYN8 130 aa12.94□□□□□ -0.34
PDZD3-210ENST00000529098 GNLYP22749 145 aa12.94□□□□□ -0.34
PDZD3-210ENST00000529098 H0YGX0 51 aa12.93□□□□□ -0.34
PDZD3-210ENST00000529098 C10orf105Q8TEF2 133 aa12.93□□□□□ -0.34
PDZD3-210ENST00000529098 USP24Q9UPU5 2620 aa12.92□□□□□ -0.34
PDZD3-210ENST00000529098 IGHV3-38A0A0C4DH36 116 aa12.92□□□□□ -0.34
PDZD3-210ENST00000529098 KNCNA6PVL3 124 aa12.92□□□□□ -0.34
PDZD3-210ENST00000529098 K7EQG2 157 aa12.92□□□□□ -0.34
PDZD3-210ENST00000529098 FLNCQ14315 2725 aa12.91□□□□□ -0.34
PDZD3-210ENST00000529098 LINC00337Q8N6G1 96 aa12.91□□□□□ -0.34
PDZD3-210ENST00000529098 EPG5Q9HCE0 2579 aa12.9□□□□□ -0.34
PDZD3-210ENST00000529098 S100A7L2Q5SY68 101 aa12.9□□□□□ -0.34
PDZD3-210ENST00000529098 C19orf84I3L1E1 186 aa12.89□□□□□ -0.35
PDZD3-210ENST00000529098 IGLV1-40P01703 118 aa12.89□□□□□ -0.35
PDZD3-210ENST00000529098 SMIM11BQ8TCY0 68 aa12.89□□□□□ -0.35
PDZD3-210ENST00000529098 IGKV2-28A0A075B6P5 120 aa12.89□□□□□ -0.35
PDZD3-210ENST00000529098 GHRHP01286 108 aa12.89□□□□□ -0.35
PDZD3-210ENST00000529098 IGKV2D-28P01615 120 aa12.89□□□□□ -0.35
PDZD3-210ENST00000529098 IGHV3-53P01767 116 aa12.89□□□□□ -0.35
PDZD3-210ENST00000529098 RBMY1A1P0DJD3 496 aaKnown RBP12.89□□□□□ -0.35
PDZD3-210ENST00000529098 RBMY1CP0DJD4 496 aa12.89□□□□□ -0.35
PDZD3-210ENST00000529098 HTN1P15515 57 aa12.89□□□□□ -0.35
PDZD3-210ENST00000529098 RBMY1FQ15415 496 aaKnown RBP12.89□□□□□ -0.35
PDZD3-210ENST00000529098 ATP5EP2Q5VTU8 51 aa12.89□□□□□ -0.35
PDZD3-210ENST00000529098 PIMREGQ9BSJ6 248 aa12.88□□□□□ -0.35
PDZD3-210ENST00000529098 NCR3O14931 201 aa12.88□□□□□ -0.35
PDZD3-210ENST00000529098 TMEM243Q9BU79 118 aa12.87□□□□□ -0.35
PDZD3-210ENST00000529098 SND1-IT1Q9HBX3 110 aa12.87□□□□□ -0.35
PDZD3-210ENST00000529098 VPS13CQ709C8 3753 aa12.87□□□□□ -0.35
PDZD3-210ENST00000529098 CCKP06307 115 aa12.87□□□□□ -0.35
PDZD3-210ENST00000529098 RBMY1BA6NDE4 496 aaKnown RBP12.86□□□□□ -0.35
PDZD3-210ENST00000529098 RBMY1EA6NEQ0 496 aaKnown RBP12.86□□□□□ -0.35
PDZD3-210ENST00000529098 EPM2AB3EWF7 344 aa12.86□□□□□ -0.35
PDZD3-210ENST00000529098 RBMY1DP0C7P1 496 aaKnown RBP12.86□□□□□ -0.35
PDZD3-210ENST00000529098 PFN2P35080 140 aa12.86□□□□□ -0.35
PDZD3-210ENST00000529098 PRO0628Q9UI54 55 aa12.86□□□□□ -0.35
PDZD3-210ENST00000529098 FAM236DA0A1B0GTK5 79 aa12.86□□□□□ -0.35
PDZD3-210ENST00000529098 FAM236CP0DP71 79 aa12.86□□□□□ -0.35
PDZD3-210ENST00000529098 UTP20O75691 2785 aaKnown RBP12.85□□□□□ -0.35
PDZD3-210ENST00000529098 USP9XQ93008 2570 aaPredicted RBP12.85□□□□□ -0.35
PDZD3-210ENST00000529098 LECT2O14960 151 aa12.85□□□□□ -0.35
PDZD3-210ENST00000529098 HILS1P60008 231 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms