RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 TMEM70Q9BUB7 260 aa5.75□□□□□ -1.49
SSBP3-212ENST00000528930 MLST8Q9BVC4 326 aa5.75□□□□□ -1.49
SSBP3-212ENST00000528930 NXPH4O95158 308 aa5.74□□□□□ -1.49
SSBP3-212ENST00000528930 OXTP01178 125 aa5.74□□□□□ -1.49
SSBP3-212ENST00000528930 SRIP30626 198 aa5.74□□□□□ -1.49
SSBP3-212ENST00000528930 HINT1P49773 126 aaPredicted RBP5.74□□□□□ -1.49
SSBP3-212ENST00000528930 GNG4P50150 75 aa5.74□□□□□ -1.49
SSBP3-212ENST00000528930 CT83Q5H943 113 aa5.74□□□□□ -1.49
SSBP3-212ENST00000528930 TTC32Q5I0X7 151 aa5.74□□□□□ -1.49
SSBP3-212ENST00000528930 BVES-AS1Q5T3Y7 98 aa5.74□□□□□ -1.49
SSBP3-212ENST00000528930 SLC25A29Q8N8R3 303 aa5.74□□□□□ -1.49
SSBP3-212ENST00000528930 C18orf32Q8TCD1 76 aa5.74□□□□□ -1.49
SSBP3-212ENST00000528930 TMEM191AQ9H0A3 160 aa5.74□□□□□ -1.49
SSBP3-212ENST00000528930 IGHV3-73A0A0B4J1V6 119 aa5.73□□□□□ -1.49
SSBP3-212ENST00000528930 TRBV6-4A0A1B0GX49 114 aa5.73□□□□□ -1.49
SSBP3-212ENST00000528930 H3BRM9 83 aa5.73□□□□□ -1.49
SSBP3-212ENST00000528930 H3BVH4 76 aa5.73□□□□□ -1.49
SSBP3-212ENST00000528930 HSBP1O75506 76 aa5.73□□□□□ -1.49
SSBP3-212ENST00000528930 ARMS2P0C7Q2 107 aa5.73□□□□□ -1.49
SSBP3-212ENST00000528930 S100A4P26447 101 aaKnown RBP5.73□□□□□ -1.49
SSBP3-212ENST00000528930 PIK3CD-AS1Q5SR53 167 aa5.73□□□□□ -1.49
SSBP3-212ENST00000528930 LELP1Q5T871 98 aa5.73□□□□□ -1.49
SSBP3-212ENST00000528930 UFSP1Q6NVU6 142 aa5.73□□□□□ -1.49
SSBP3-212ENST00000528930 OR5A1Q8NGJ0 315 aa5.73□□□□□ -1.49
SSBP3-212ENST00000528930 DEFB104AQ8WTQ1 72 aa5.73□□□□□ -1.49
SSBP3-212ENST00000528930 DERL1Q9BUN8 251 aa5.73□□□□□ -1.49
SSBP3-212ENST00000528930 JPT2Q9H910 190 aa5.73□□□□□ -1.49
SSBP3-212ENST00000528930 TMSB15BA0A087X1C1 80 aa5.72□□□□□ -1.49
SSBP3-212ENST00000528930 A8MWV9 139 aa5.72□□□□□ -1.49
SSBP3-212ENST00000528930 ZFP2Q6ZN57 461 aa5.72□□□□□ -1.49
SSBP3-212ENST00000528930 WFDC10BQ8IUB3 73 aa5.72□□□□□ -1.49
SSBP3-212ENST00000528930 MTURNQ8N3F0 131 aa5.72□□□□□ -1.49
SSBP3-212ENST00000528930 GFRA4Q9GZZ7 299 aa5.72□□□□□ -1.49
SSBP3-212ENST00000528930 CRCT1Q9UGL9 99 aa5.72□□□□□ -1.49
SSBP3-212ENST00000528930 A0A1B0GXF2 115 aa5.71□□□□□ -1.5
SSBP3-212ENST00000528930 SYS1-DBNDD2H3BUS1 97 aa5.71□□□□□ -1.5
SSBP3-212ENST00000528930 IGLV2-8P01709 118 aa5.71□□□□□ -1.5
SSBP3-212ENST00000528930 MGST1P10620 155 aaKnown RBP5.71□□□□□ -1.5
SSBP3-212ENST00000528930 TIRAPP58753 221 aa5.71□□□□□ -1.5
SSBP3-212ENST00000528930 LINC00315P59091 139 aa5.71□□□□□ -1.5
SSBP3-212ENST00000528930 RHOHQ15669 191 aa5.71□□□□□ -1.5
SSBP3-212ENST00000528930 CENPWQ5EE01 88 aa5.71□□□□□ -1.5
SSBP3-212ENST00000528930 Q6ZRN7 208 aaPredicted RBP5.71□□□□□ -1.5
SSBP3-212ENST00000528930 FER1L6-AS1Q8NA97 138 aa5.71□□□□□ -1.5
SSBP3-212ENST00000528930 Q9UF83 564 aa5.71□□□□□ -1.5
SSBP3-212ENST00000528930 HSPB8Q9UJY1 196 aa5.71□□□□□ -1.5
SSBP3-212ENST00000528930 TNXBP22105 4242 aa5.7□□□□□ -1.5
SSBP3-212ENST00000528930 A0A1B0GW15 77 aa5.7□□□□□ -1.5
SSBP3-212ENST00000528930 A6NDN8 102 aa5.7□□□□□ -1.5
SSBP3-212ENST00000528930 GAGE10A6NGK3 116 aa5.7□□□□□ -1.5
SSBP3-212ENST00000528930 C9orf118A6NHY6 69 aa5.7□□□□□ -1.5
SSBP3-212ENST00000528930 F2Z2F3 143 aa5.7□□□□□ -1.5
SSBP3-212ENST00000528930 GAS8-AS1O95177 125 aa5.7□□□□□ -1.5
SSBP3-212ENST00000528930 CRYGDP07320 174 aa5.7□□□□□ -1.5
SSBP3-212ENST00000528930 DNAH10OSP0CZ25 163 aa5.7□□□□□ -1.5
SSBP3-212ENST00000528930 LINC00694P0DN24 101 aa5.7□□□□□ -1.5
SSBP3-212ENST00000528930 COX8AP10176 69 aa5.7□□□□□ -1.5
SSBP3-212ENST00000528930 RNF151Q2KHN1 245 aa5.7□□□□□ -1.5
SSBP3-212ENST00000528930 MPV17L2Q567V2 206 aa5.7□□□□□ -1.5
SSBP3-212ENST00000528930 SH2D6Q7Z4S9 175 aa5.7□□□□□ -1.5
SSBP3-212ENST00000528930 GATD1Q8NB37 220 aa5.7□□□□□ -1.5
SSBP3-212ENST00000528930 PRADC1Q9BSG0 188 aa5.7□□□□□ -1.5
SSBP3-212ENST00000528930 PHLDA3Q9Y5J5 127 aa5.7□□□□□ -1.5
SSBP3-212ENST00000528930 TNFRSF18Q9Y5U5 241 aa5.7□□□□□ -1.5
SSBP3-212ENST00000528930 SNAI2O43623 268 aa5.69□□□□□ -1.5
SSBP3-212ENST00000528930 FOXA3P55318 350 aaPredicted RBP5.69□□□□□ -1.5
SSBP3-212ENST00000528930 LINC01545Q5VT33 79 aa5.69□□□□□ -1.5
SSBP3-212ENST00000528930 AMMECR1LQ6DCA0 310 aa5.69□□□□□ -1.5
SSBP3-212ENST00000528930 C14orf178Q8N769 122 aaPredicted RBP5.69□□□□□ -1.5
SSBP3-212ENST00000528930 OR10AG1Q8NH19 301 aa5.69□□□□□ -1.5
SSBP3-212ENST00000528930 GTSF1LQ9H1H1 148 aa5.69□□□□□ -1.5
SSBP3-212ENST00000528930 A0A087WWL8 130 aa5.68□□□□□ -1.5
SSBP3-212ENST00000528930 C19orf71A6NCJ1 209 aa5.68□□□□□ -1.5
SSBP3-212ENST00000528930 GAGE12JA6NER3 117 aa5.68□□□□□ -1.5
SSBP3-212ENST00000528930 K7EP34 96 aa5.68□□□□□ -1.5
SSBP3-212ENST00000528930 M0R381 172 aa5.68□□□□□ -1.5
SSBP3-212ENST00000528930 RHODO00212 210 aa5.68□□□□□ -1.5
SSBP3-212ENST00000528930 GAGE4Q13068 117 aa5.68□□□□□ -1.5
SSBP3-212ENST00000528930 GAGE5Q13069 117 aa5.68□□□□□ -1.5
SSBP3-212ENST00000528930 GAGE13Q4V321 117 aa5.68□□□□□ -1.5
SSBP3-212ENST00000528930 TMEM97Q5BJF2 176 aa5.68□□□□□ -1.5
SSBP3-212ENST00000528930 ATP6V0E2Q8NHE4 81 aa5.68□□□□□ -1.5
SSBP3-212ENST00000528930 MAP1LC3CQ9BXW4 147 aa5.68□□□□□ -1.5
SSBP3-212ENST00000528930 IGHV3-38A0A0C4DH36 116 aa5.67□□□□□ -1.5
SSBP3-212ENST00000528930 A8MWL6 223 aa5.67□□□□□ -1.5
SSBP3-212ENST00000528930 J3QR89 54 aa5.67□□□□□ -1.5
SSBP3-212ENST00000528930 LEPROTL1O95214 131 aa5.67□□□□□ -1.5
SSBP3-212ENST00000528930 EVI2AP22794 236 aa5.67□□□□□ -1.5
SSBP3-212ENST00000528930 KRTAP10-1P60331 282 aa5.67□□□□□ -1.5
SSBP3-212ENST00000528930 HBBP68871 147 aa5.67□□□□□ -1.5
SSBP3-212ENST00000528930 LINC01556Q5JQF7 62 aa5.67□□□□□ -1.5
SSBP3-212ENST00000528930 FAM74A4Q5TZK3 123 aa5.67□□□□□ -1.5
SSBP3-212ENST00000528930 NUP35Q8NFH5 326 aa5.67□□□□□ -1.5
SSBP3-212ENST00000528930 DNAH8Q96JB1 4490 aa5.66□□□□□ -1.5
SSBP3-212ENST00000528930 TRAV8-6A0A0B4J262 113 aa5.66□□□□□ -1.5
SSBP3-212ENST00000528930 MUC21A0A0G2JKD1 596 aa5.66□□□□□ -1.5
SSBP3-212ENST00000528930 MUC21A0A140T8X8 626 aa5.66□□□□□ -1.5
SSBP3-212ENST00000528930 A0A1B0GV72 72 aa5.66□□□□□ -1.5
SSBP3-212ENST00000528930 IGLC6P0CF74 106 aa5.66□□□□□ -1.5
SSBP3-212ENST00000528930 NTF3P20783 257 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms