RNA–Protein interactions for RNA: ENST00000528922.1

CD44-230, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 1,319 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-230ENST00000528922 TRBV7-3A0A075B6L6 115 aa3.51□□□□□ -1.85
CD44-230ENST00000528922 TRAV8-2A0A0B4J237 113 aa3.51□□□□□ -1.85
CD44-230ENST00000528922 A0A0J9YX75 114 aa3.51□□□□□ -1.85
CD44-230ENST00000528922 TRBV27A0A0K0K1C4 114 aa3.51□□□□□ -1.85
CD44-230ENST00000528922 CLPSL1A2RUU4 121 aa3.51□□□□□ -1.85
CD44-230ENST00000528922 SDHAF1A6NFY7 115 aa3.51□□□□□ -1.85
CD44-230ENST00000528922 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
CD44-230ENST00000528922 APOMO95445 188 aa3.51□□□□□ -1.85
CD44-230ENST00000528922 MGPP08493 103 aa3.51□□□□□ -1.85
CD44-230ENST00000528922 MRAPQ8TCY5 172 aa3.51□□□□□ -1.85
CD44-230ENST00000528922 PPDPFLQ8WWR9 84 aa3.51□□□□□ -1.85
CD44-230ENST00000528922 EDA2RQ9HAV5 297 aa3.51□□□□□ -1.85
CD44-230ENST00000528922 S4R3C0 116 aa3.51□□□□□ -1.85
CD44-230ENST00000528922 CSMD2Q7Z408 3487 aa3.51□□□□□ -1.85
CD44-230ENST00000528922 JMJD1CQ15652 2540 aa3.51□□□□□ -1.85
CD44-230ENST00000528922 IGHV3OR16-12A0A075B7B8 117 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 TRAV2A0A0B4J234 112 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 A8MWV9 139 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 KLLNB2CW77 178 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 J3QLI3 93 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 LGALS9O00182 355 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 LEPROTO15243 131 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 IGHV3-23P01764 117 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 GIG44P09565 113 aaPredicted RBP3.5□□□□□ -1.85
CD44-230ENST00000528922 SCGB1C2P0DMR2 95 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 UBE2D1P51668 147 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 POLR2KP53803 58 aaKnown RBP3.5□□□□□ -1.85
CD44-230ENST00000528922 NSUN5P1Q3KNT7 163 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 RNF182Q8N6D2 247 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 ZFAND2AQ8N6M9 145 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 SLC25A29Q8N8R3 303 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 BAALCQ8WXS3 180 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 PTH2Q96A98 100 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 FAM19A4Q96LR4 140 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 PRADC1Q9BSG0 188 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 RHPN1-AS1Q9BWJ2 59 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 PRO1854Q9UHT4 67 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 ARHGAP32A7KAX9 2087 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 CSPG4Q6UVK1 2322 aa3.5□□□□□ -1.85
CD44-230ENST00000528922 CCDC168Q8NDH2 2452 aa3.49□□□□□ -1.85
CD44-230ENST00000528922 IGKV2D-26A0A0A0MRZ7 120 aa3.49□□□□□ -1.85
CD44-230ENST00000528922 A0A0B4J2C4 111 aa3.49□□□□□ -1.85
CD44-230ENST00000528922 LOC107984156A0A0G2JMH3 177 aa3.49□□□□□ -1.85
CD44-230ENST00000528922 A0A0U1RRA0 63 aa3.49□□□□□ -1.85
CD44-230ENST00000528922 I3L3M4 83 aa3.49□□□□□ -1.85
CD44-230ENST00000528922 M0R2P5 195 aa3.49□□□□□ -1.85
CD44-230ENST00000528922 LGALS1P09382 135 aaKnown RBP3.49□□□□□ -1.85
CD44-230ENST00000528922 KRTAP1-4P0C5Y4 121 aa3.49□□□□□ -1.85
CD44-230ENST00000528922 IFITM1P13164 125 aa3.49□□□□□ -1.85
CD44-230ENST00000528922 RNASE4P34096 147 aaKnown RBP3.49□□□□□ -1.85
CD44-230ENST00000528922 UBE2D3P61077 147 aa3.49□□□□□ -1.85
CD44-230ENST00000528922 UBE2D2P62837 147 aa3.49□□□□□ -1.85
CD44-230ENST00000528922 CIRBPQ14011 172 aaKnown RBP3.49□□□□□ -1.85
CD44-230ENST00000528922 ATXN8Q156A1 80 aa3.49□□□□□ -1.85
CD44-230ENST00000528922 MRPL23Q16540 153 aaKnown RBP3.49□□□□□ -1.85
CD44-230ENST00000528922 ZFP2Q6ZN57 461 aa3.49□□□□□ -1.85
CD44-230ENST00000528922 TEN1Q86WV5 123 aa3.49□□□□□ -1.85
CD44-230ENST00000528922 ARL17AQ8IVW1 177 aa3.49□□□□□ -1.85
CD44-230ENST00000528922 C10orf126Q8N4M7 172 aa3.49□□□□□ -1.85
CD44-230ENST00000528922 C14orf178Q8N769 122 aaPredicted RBP3.49□□□□□ -1.85
CD44-230ENST00000528922 DNAJC30Q96LL9 226 aa3.49□□□□□ -1.85
CD44-230ENST00000528922 SPANXCQ9NY87 97 aa3.49□□□□□ -1.85
CD44-230ENST00000528922 Q9UF83 564 aa3.49□□□□□ -1.85
CD44-230ENST00000528922 IGHV1OR15-1A0A075B7D0 117 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 IGHV3-35A0A0C4DH35 117 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 A0A0J9YXY3 114 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 FAM168BA1KXE4 195 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 A6NDX4 124 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 IGIPA6NJ69 53 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 B4DSR2 109 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 G3V318 75 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 J3QQQ9 107 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 CD7P09564 240 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 P0DMU3 169 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 FAM231AP0DMU4 169 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 FAM231CP0DMU5 169 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 AZU1P20160 251 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 CMC4P56277 68 aaPredicted RBP3.48□□□□□ -1.85
CD44-230ENST00000528922 FXYD7P58549 80 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 ETDBQ3ZM63 59 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 TMEM170BQ5T4T1 132 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 CFAP126Q5VTH2 177 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 NDUFA11Q86Y39 141 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 LINC01600Q96MT4 127 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 SPXQ9BT56 116 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 BPESC1Q9GZL8 116 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 PPDPFQ9H3Y8 114 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 ESM1Q9NQ30 184 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 ERG28Q9UKR5 140 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 TP53TG1Q9Y2A0 90 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 NOTCH1P46531 2555 aa3.48□□□□□ -1.85
CD44-230ENST00000528922 TRAV26-2A0A0B4J265 109 aa3.47□□□□□ -1.85
CD44-230ENST00000528922 A0A0J9YY99 117 aa3.47□□□□□ -1.85
CD44-230ENST00000528922 TRBV30A0A0K0K1B3 111 aa3.47□□□□□ -1.85
CD44-230ENST00000528922 TIMM17BO60830 172 aa3.47□□□□□ -1.85
CD44-230ENST00000528922 ACYP1P07311 99 aa3.47□□□□□ -1.85
CD44-230ENST00000528922 ZNF688P0C7X2 276 aa3.47□□□□□ -1.85
CD44-230ENST00000528922 RNASE3P12724 160 aaKnown RBP3.47□□□□□ -1.85
CD44-230ENST00000528922 COX6B1P14854 86 aa3.47□□□□□ -1.85
CD44-230ENST00000528922 RPL13AP40429 203 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms