RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 IGLV4-69A0A075B6H9 119 aa7.11□□□□□ -1.27
CMTM1-211ENST00000528484 SMAGPQ0VAQ4 97 aa7.11□□□□□ -1.27
CMTM1-211ENST00000528484 C1orf137Q5JT78 98 aa7.11□□□□□ -1.27
CMTM1-211ENST00000528484 TSKUQ8WUA8 353 aa7.11□□□□□ -1.27
CMTM1-211ENST00000528484 DIRC1Q969H9 104 aa7.11□□□□□ -1.27
CMTM1-211ENST00000528484 RPL39LQ96EH5 51 aaKnown RBP7.11□□□□□ -1.27
CMTM1-211ENST00000528484 RAB19A4D1S5 217 aa7.1□□□□□ -1.27
CMTM1-211ENST00000528484 MEF2BQ02080 365 aaPredicted RBP7.1□□□□□ -1.27
CMTM1-211ENST00000528484 RPL18AQ02543 176 aaKnown RBP7.1□□□□□ -1.27
CMTM1-211ENST00000528484 CAMK2N2Q96S95 79 aa7.1□□□□□ -1.27
CMTM1-211ENST00000528484 CNFNQ9BYD5 112 aa7.1□□□□□ -1.27
CMTM1-211ENST00000528484 MED9Q9NWA0 146 aa7.1□□□□□ -1.27
CMTM1-211ENST00000528484 G3V3Q6 166 aa7.09□□□□□ -1.27
CMTM1-211ENST00000528484 COX7A2LO14548 114 aa7.09□□□□□ -1.27
CMTM1-211ENST00000528484 BCL2L11O43521 198 aa7.09□□□□□ -1.27
CMTM1-211ENST00000528484 APOMO95445 188 aa7.09□□□□□ -1.27
CMTM1-211ENST00000528484 RPP21Q9H633 154 aaKnown RBP7.09□□□□□ -1.27
CMTM1-211ENST00000528484 C1orf196B1AJZ1 125 aa7.08□□□□□ -1.28
CMTM1-211ENST00000528484 C9orf116Q5BN46 136 aaPredicted RBP7.08□□□□□ -1.28
CMTM1-211ENST00000528484 NUDT10Q8NFP7 164 aa7.08□□□□□ -1.28
CMTM1-211ENST00000528484 BORCS7Q96B45 105 aa7.08□□□□□ -1.28
CMTM1-211ENST00000528484 NUDT11Q96G61 164 aa7.08□□□□□ -1.28
CMTM1-211ENST00000528484 ST20Q9HBF5 79 aa7.08□□□□□ -1.28
CMTM1-211ENST00000528484 TRAV1-1A0A0B4J248 108 aa7.07□□□□□ -1.28
CMTM1-211ENST00000528484 A0A1W2PNN7 141 aa7.07□□□□□ -1.28
CMTM1-211ENST00000528484 BCL2P10415 239 aa7.07□□□□□ -1.28
CMTM1-211ENST00000528484 CDC42SE2Q9NRR3 84 aa7.07□□□□□ -1.28
CMTM1-211ENST00000528484 C7orf77A4D0Y5 90 aa7.06□□□□□ -1.28
CMTM1-211ENST00000528484 HMSDA8MTL9 139 aa7.06□□□□□ -1.28
CMTM1-211ENST00000528484 SMLR1H3BR10 107 aa7.06□□□□□ -1.28
CMTM1-211ENST00000528484 ESDP10768 282 aa7.06□□□□□ -1.28
CMTM1-211ENST00000528484 UBE2D1P51668 147 aa7.06□□□□□ -1.28
CMTM1-211ENST00000528484 MRPL52Q86TS9 123 aaKnown RBP7.06□□□□□ -1.28
CMTM1-211ENST00000528484 PRR26Q8N8Z3 221 aa7.06□□□□□ -1.28
CMTM1-211ENST00000528484 NUP35Q8NFH5 326 aa7.06□□□□□ -1.28
CMTM1-211ENST00000528484 C2orf48Q96LS8 159 aa7.06□□□□□ -1.28
CMTM1-211ENST00000528484 TMEM242Q9NWH2 141 aa7.06□□□□□ -1.28
CMTM1-211ENST00000528484 IGLV1-50A0A075B6I6 118 aa7.05□□□□□ -1.28
CMTM1-211ENST00000528484 TRBV6-5A0A0K0K1A5 114 aa7.05□□□□□ -1.28
CMTM1-211ENST00000528484 FCER1GP30273 86 aa7.05□□□□□ -1.28
CMTM1-211ENST00000528484 TAGLN2P37802 199 aaKnown RBP7.05□□□□□ -1.28
CMTM1-211ENST00000528484 PRR4Q16378 134 aa7.05□□□□□ -1.28
CMTM1-211ENST00000528484 PHF5AQ7RTV0 110 aaKnown RBP7.05□□□□□ -1.28
CMTM1-211ENST00000528484 RNASE7Q9H1E1 156 aaKnown RBP7.05□□□□□ -1.28
CMTM1-211ENST00000528484 TRBV20OR9-2A0A075B6H5 130 aa7.04□□□□□ -1.28
CMTM1-211ENST00000528484 A0A087WZ39 114 aa7.04□□□□□ -1.28
CMTM1-211ENST00000528484 H0Y9J4 135 aa7.04□□□□□ -1.28
CMTM1-211ENST00000528484 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.04□□□□□ -1.28
CMTM1-211ENST00000528484 TSHBP01222 138 aa7.04□□□□□ -1.28
CMTM1-211ENST00000528484 IGLV7-43P04211 117 aa7.04□□□□□ -1.28
CMTM1-211ENST00000528484 SMCPP49901 116 aaPredicted RBP7.04□□□□□ -1.28
CMTM1-211ENST00000528484 IMMP2LQ96T52 175 aa7.04□□□□□ -1.28
CMTM1-211ENST00000528484 TMEM238LA0A1B0GVL6 79 aa7.03□□□□□ -1.28
CMTM1-211ENST00000528484 A8MWL6 223 aa7.03□□□□□ -1.28
CMTM1-211ENST00000528484 GATCO43716 136 aaKnown RBP7.03□□□□□ -1.28
CMTM1-211ENST00000528484 RPL13AP40429 203 aaKnown RBP7.03□□□□□ -1.28
CMTM1-211ENST00000528484 SPAG11BQ08648 103 aa7.03□□□□□ -1.28
CMTM1-211ENST00000528484 RGS21Q2M5E4 152 aa7.03□□□□□ -1.28
CMTM1-211ENST00000528484 TRAV13-1A0A0B4J241 112 aa7.02□□□□□ -1.29
CMTM1-211ENST00000528484 FOXA3P55318 350 aaPredicted RBP7.02□□□□□ -1.29
CMTM1-211ENST00000528484 RNF151Q2KHN1 245 aa7.02□□□□□ -1.29
CMTM1-211ENST00000528484 TMEM18Q96B42 140 aa7.02□□□□□ -1.29
CMTM1-211ENST00000528484 OPRPNQ99935 248 aaPredicted RBP7.02□□□□□ -1.29
CMTM1-211ENST00000528484 BATF3Q9NR55 127 aa7.02□□□□□ -1.29
CMTM1-211ENST00000528484 TRBV27A0A0K0K1C4 114 aa7.01□□□□□ -1.29
CMTM1-211ENST00000528484 F8WDY8 70 aa7.01□□□□□ -1.29
CMTM1-211ENST00000528484 VCYO14598 125 aa7.01□□□□□ -1.29
CMTM1-211ENST00000528484 PPP1R17O96001 155 aa7.01□□□□□ -1.29
CMTM1-211ENST00000528484 UBE2BP63146 152 aa7.01□□□□□ -1.29
CMTM1-211ENST00000528484 C5orf38Q86SI9 138 aa7.01□□□□□ -1.29
CMTM1-211ENST00000528484 OR10D4PQ8NGN7 298 aa7.01□□□□□ -1.29
CMTM1-211ENST00000528484 KIR2DL4Q99706 377 aa7.01□□□□□ -1.29
CMTM1-211ENST00000528484 CSDC2Q9Y534 153 aaKnown RBP7.01□□□□□ -1.29
CMTM1-211ENST00000528484 K7EN84 100 aa7□□□□□ -1.29
CMTM1-211ENST00000528484 NDUFA1O15239 70 aa7□□□□□ -1.29
CMTM1-211ENST00000528484 OCC1Q8TAD7 63 aa7□□□□□ -1.29
CMTM1-211ENST00000528484 MRPL35Q9NZE8 188 aaKnown RBP7□□□□□ -1.29
CMTM1-211ENST00000528484 A0A1B0GUT8 65 aa6.99□□□□□ -1.29
CMTM1-211ENST00000528484 POLR2KP53803 58 aaKnown RBP6.99□□□□□ -1.29
CMTM1-211ENST00000528484 CT83Q5H943 113 aa6.99□□□□□ -1.29
CMTM1-211ENST00000528484 ORAOV1Q8WV07 137 aa6.99□□□□□ -1.29
CMTM1-211ENST00000528484 TMEM191AQ9H0A3 160 aa6.99□□□□□ -1.29
CMTM1-211ENST00000528484 hCG_2014768A0A024R1R8 64 aa6.98□□□□□ -1.29
CMTM1-211ENST00000528484 TMEM241Q24JQ0 296 aa6.98□□□□□ -1.29
CMTM1-211ENST00000528484 RNASE13Q5GAN3 156 aaKnown RBP6.98□□□□□ -1.29
CMTM1-211ENST00000528484 FAM231DQ6ZW35 169 aa6.98□□□□□ -1.29
CMTM1-211ENST00000528484 FAM19A5Q7Z5A7 132 aaPredicted RBP6.98□□□□□ -1.29
CMTM1-211ENST00000528484 UBE2D4Q9Y2X8 147 aa6.98□□□□□ -1.29
CMTM1-211ENST00000528484 FAT4Q6V0I7 4981 aa6.98□□□□□ -1.29
CMTM1-211ENST00000528484 PPP1R2P9O14990 202 aa6.97□□□□□ -1.29
CMTM1-211ENST00000528484 KRTAP9-2Q9BYQ4 174 aa6.97□□□□□ -1.29
CMTM1-211ENST00000528484 HIGD1CA8MV81 97 aa6.96□□□□□ -1.3
CMTM1-211ENST00000528484 M0QXV9 152 aa6.96□□□□□ -1.3
CMTM1-211ENST00000528484 TCAPO15273 167 aa6.96□□□□□ -1.3
CMTM1-211ENST00000528484 TLX1NBP0CAT3 122 aa6.96□□□□□ -1.3
CMTM1-211ENST00000528484 RAB4AP20338 218 aa6.96□□□□□ -1.3
CMTM1-211ENST00000528484 SUMO2P61956 95 aaKnown RBP6.96□□□□□ -1.3
CMTM1-211ENST00000528484 GAGE2EQ4V326 116 aa6.96□□□□□ -1.3
CMTM1-211ENST00000528484 Q6ZUT4 128 aa6.96□□□□□ -1.3
CMTM1-211ENST00000528484 AMN1Q8IY45 258 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms