RNA–Protein interactions for RNA: ENST00000527421.5

UBXN1-208, Transcript of UBX domain protein 1, humanhuman

TSL 5

Gene UBXN1, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-208ENST00000527421 FAM229AH3BQW9 127 aa12.11□□□□□ -0.47
UBXN1-208ENST00000527421 TRBV24-1A0A075B6N3 115 aa12.1□□□□□ -0.47
UBXN1-208ENST00000527421 TNFRSF6BO95407 300 aa12.1□□□□□ -0.47
UBXN1-208ENST00000527421 SCXQ7RTU7 201 aa12.1□□□□□ -0.47
UBXN1-208ENST00000527421 PPBPP02775 128 aa12.09□□□□□ -0.47
UBXN1-208ENST00000527421 RPL32P62910 135 aaKnown RBP12.09□□□□□ -0.47
UBXN1-208ENST00000527421 SMAGPQ0VAQ4 97 aa12.09□□□□□ -0.47
UBXN1-208ENST00000527421 UQCC3Q6UW78 93 aa12.09□□□□□ -0.47
UBXN1-208ENST00000527421 AP5S1Q9NUS5 200 aa12.09□□□□□ -0.47
UBXN1-208ENST00000527421 DNAH8Q96JB1 4490 aa12.08□□□□□ -0.48
UBXN1-208ENST00000527421 CNBPP62633 177 aaKnown RBP12.08□□□□□ -0.48
UBXN1-208ENST00000527421 CFAP161Q6P656 301 aa12.08□□□□□ -0.48
UBXN1-208ENST00000527421 C9orf163Q8N9P6 203 aa12.08□□□□□ -0.48
UBXN1-208ENST00000527421 CHAC1Q9BUX1 264 aa12.08□□□□□ -0.48
UBXN1-208ENST00000527421 SMIM2Q9BVW6 85 aa12.08□□□□□ -0.48
UBXN1-208ENST00000527421 CDC42SE2Q9NRR3 84 aa12.08□□□□□ -0.48
UBXN1-208ENST00000527421 PHOX2AO14813 284 aa12.07□□□□□ -0.48
UBXN1-208ENST00000527421 TCAPO15273 167 aa12.07□□□□□ -0.48
UBXN1-208ENST00000527421 NPYP01303 97 aa12.07□□□□□ -0.48
UBXN1-208ENST00000527421 ZNF664Q8N3J9 261 aa12.07□□□□□ -0.48
UBXN1-208ENST00000527421 C15orf56Q8N910 161 aa12.07□□□□□ -0.48
UBXN1-208ENST00000527421 FAT1Q14517 4588 aa12.06□□□□□ -0.48
UBXN1-208ENST00000527421 LINC00959A0A1B0GUT2 108 aa12.06□□□□□ -0.48
UBXN1-208ENST00000527421 XCL1P47992 114 aa12.06□□□□□ -0.48
UBXN1-208ENST00000527421 ORMDL3Q8N138 153 aa12.06□□□□□ -0.48
UBXN1-208ENST00000527421 TMEM18Q96B42 140 aa12.06□□□□□ -0.48
UBXN1-208ENST00000527421 UBE2D4Q9Y2X8 147 aa12.06□□□□□ -0.48
UBXN1-208ENST00000527421 HERC1Q15751 4861 aa12.06□□□□□ -0.48
UBXN1-208ENST00000527421 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.05□□□□□ -0.48
UBXN1-208ENST00000527421 CCL25O15444 150 aa12.05□□□□□ -0.48
UBXN1-208ENST00000527421 INAFM2P0DMQ5 153 aa12.05□□□□□ -0.48
UBXN1-208ENST00000527421 ADCYAP1P18509 176 aa12.05□□□□□ -0.48
UBXN1-208ENST00000527421 FOXI1Q12951 378 aa12.05□□□□□ -0.48
UBXN1-208ENST00000527421 SS18Q15532 418 aa12.05□□□□□ -0.48
UBXN1-208ENST00000527421 LINC00528Q8N1L1 170 aa12.05□□□□□ -0.48
UBXN1-208ENST00000527421 CSDC2Q9Y534 153 aaKnown RBP12.05□□□□□ -0.48
UBXN1-208ENST00000527421 TMEM218A2RU14 115 aa12.04□□□□□ -0.48
UBXN1-208ENST00000527421 TMEM136Q6ZRR5 245 aa12.04□□□□□ -0.48
UBXN1-208ENST00000527421 DMBT1Q9UGM3 2413 aaPredicted RBP12.03□□□□□ -0.48
UBXN1-208ENST00000527421 HIGD2BQ4VC39 106 aa12.03□□□□□ -0.48
UBXN1-208ENST00000527421 CIRBP-AS1Q8TBR5 109 aa12.03□□□□□ -0.48
UBXN1-208ENST00000527421 PRELID3AQ96N28 172 aa12.03□□□□□ -0.48
UBXN1-208ENST00000527421 TIMM21Q9BVV7 248 aa12.03□□□□□ -0.48
UBXN1-208ENST00000527421 PLA2G1BP04054 148 aaKnown RBP12.02□□□□□ -0.49
UBXN1-208ENST00000527421 IGHV3-64A0A075B6Q5 118 aa12.01□□□□□ -0.49
UBXN1-208ENST00000527421 GVQW2A0A096LPI5 108 aaPredicted RBP12.01□□□□□ -0.49
UBXN1-208ENST00000527421 SLPIP03973 132 aa12.01□□□□□ -0.49
UBXN1-208ENST00000527421 CD164L2Q6UWJ8 174 aa12.01□□□□□ -0.49
UBXN1-208ENST00000527421 Q6ZUT4 128 aa12.01□□□□□ -0.49
UBXN1-208ENST00000527421 COMMD7Q86VX2 200 aa12.01□□□□□ -0.49
UBXN1-208ENST00000527421 LAMTOR2Q9Y2Q5 125 aa12.01□□□□□ -0.49
UBXN1-208ENST00000527421 RPL39P62891 51 aaKnown RBP12□□□□□ -0.49
UBXN1-208ENST00000527421 RNASE13Q5GAN3 156 aaKnown RBP12□□□□□ -0.49
UBXN1-208ENST00000527421 SDIM1Q6ZPB5 146 aa12□□□□□ -0.49
UBXN1-208ENST00000527421 IMMP2LQ96T52 175 aa12□□□□□ -0.49
UBXN1-208ENST00000527421 IGHV1-58A0A0C4DH39 117 aa11.99□□□□□ -0.49
UBXN1-208ENST00000527421 C1orf196B1AJZ1 125 aa11.99□□□□□ -0.49
UBXN1-208ENST00000527421 RAB5AP20339 215 aa11.99□□□□□ -0.49
UBXN1-208ENST00000527421 SEC11CQ9BY50 192 aa11.99□□□□□ -0.49
UBXN1-208ENST00000527421 CTDSP1Q9GZU7 261 aa11.99□□□□□ -0.49
UBXN1-208ENST00000527421 SPANXA1Q9NS26 97 aa11.99□□□□□ -0.49
UBXN1-208ENST00000527421 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.99□□□□□ -0.49
UBXN1-208ENST00000527421 TRAV13-1A0A0B4J241 112 aa11.98□□□□□ -0.49
UBXN1-208ENST00000527421 MAP1LC3AQ9H492 121 aa11.98□□□□□ -0.49
UBXN1-208ENST00000527421 VPS13BQ7Z7G8 4022 aa11.96□□□□□ -0.5
UBXN1-208ENST00000527421 TRAV9-1A0A075B6T8 112 aa11.95□□□□□ -0.5
UBXN1-208ENST00000527421 LOC389332A0A1B0GUA5 103 aa11.95□□□□□ -0.5
UBXN1-208ENST00000527421 PRSS47A8MTI9 375 aa11.95□□□□□ -0.5
UBXN1-208ENST00000527421 PANO1I0J062 215 aa11.95□□□□□ -0.5
UBXN1-208ENST00000527421 COX7A2LO14548 114 aa11.95□□□□□ -0.5
UBXN1-208ENST00000527421 MALP21145 153 aa11.94□□□□□ -0.5
UBXN1-208ENST00000527421 MRPS36P82909 103 aaKnown RBP11.94□□□□□ -0.5
UBXN1-208ENST00000527421 CIRBPQ14011 172 aaKnown RBP11.94□□□□□ -0.5
UBXN1-208ENST00000527421 FLG2Q5D862 2391 aaPredicted RBP11.93□□□□□ -0.5
UBXN1-208ENST00000527421 S100PP25815 95 aa11.93□□□□□ -0.5
UBXN1-208ENST00000527421 IFI27P40305 119 aaPredicted RBP11.93□□□□□ -0.5
UBXN1-208ENST00000527421 Q8N8P6 123 aa11.93□□□□□ -0.5
UBXN1-208ENST00000527421 SRRM2Q9UQ35 2752 aaKnown RBP11.93□□□□□ -0.5
UBXN1-208ENST00000527421 ZNF561-AS1K7EIQ3 104 aa11.92□□□□□ -0.5
UBXN1-208ENST00000527421 CHTF8P0CG12 524 aa11.92□□□□□ -0.5
UBXN1-208ENST00000527421 COX6A2Q02221 97 aa11.92□□□□□ -0.5
UBXN1-208ENST00000527421 FAM104AQ969W3 186 aa11.92□□□□□ -0.5
UBXN1-208ENST00000527421 LINC00526Q96FQ7 95 aa11.92□□□□□ -0.5
UBXN1-208ENST00000527421 OPRPNQ99935 248 aaPredicted RBP11.92□□□□□ -0.5
UBXN1-208ENST00000527421 IFITM10A6NMD0 228 aa11.91□□□□□ -0.5
UBXN1-208ENST00000527421 SPACA4Q8TDM5 124 aa11.91□□□□□ -0.5
UBXN1-208ENST00000527421 DPH3Q96FX2 82 aa11.91□□□□□ -0.5
UBXN1-208ENST00000527421 CARD19Q96LW7 228 aa11.91□□□□□ -0.5
UBXN1-208ENST00000527421 C10orf91Q5T1B1 145 aa11.9□□□□□ -0.5
UBXN1-208ENST00000527421 PKIGQ9Y2B9 76 aa11.9□□□□□ -0.5
UBXN1-208ENST00000527421 CARHSP1Q9Y2V2 147 aaKnown RBP11.9□□□□□ -0.5
UBXN1-208ENST00000527421 PYGO1Q9Y3Y4 419 aa11.9□□□□□ -0.5
UBXN1-208ENST00000527421 APOMO95445 188 aa11.89□□□□□ -0.51
UBXN1-208ENST00000527421 C5orf38Q86SI9 138 aa11.89□□□□□ -0.51
UBXN1-208ENST00000527421 PRSS3P2Q8NHM4 247 aa11.89□□□□□ -0.51
UBXN1-208ENST00000527421 NXT2Q9NPJ8 142 aaKnown RBP11.89□□□□□ -0.51
UBXN1-208ENST00000527421 CYSLTR1Q9Y271 337 aa11.89□□□□□ -0.51
UBXN1-208ENST00000527421 K7EMI3 77 aa11.88□□□□□ -0.51
UBXN1-208ENST00000527421 RPL37AP61513 92 aaKnown RBP11.88□□□□□ -0.51
UBXN1-208ENST00000527421 SYCNQ0VAF6 134 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms