RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 IGLV1-50A0A075B6I6 118 aa7.84□□□□□ -1.15
CLNS1A-207ENST00000527133 RAB19A4D1S5 217 aa7.84□□□□□ -1.15
CLNS1A-207ENST00000527133 G3V3Q6 166 aa7.84□□□□□ -1.15
CLNS1A-207ENST00000527133 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.84□□□□□ -1.15
CLNS1A-207ENST00000527133 MALP21145 153 aa7.84□□□□□ -1.15
CLNS1A-207ENST00000527133 EIF5AP63241 154 aaKnown RBP7.84□□□□□ -1.15
CLNS1A-207ENST00000527133 MEF2BQ02080 365 aaPredicted RBP7.84□□□□□ -1.15
CLNS1A-207ENST00000527133 EIF5AL1Q6IS14 154 aaKnown RBP7.84□□□□□ -1.15
CLNS1A-207ENST00000527133 A0A087WZ39 114 aa7.83□□□□□ -1.16
CLNS1A-207ENST00000527133 UMAD1C9J7I0 102 aa7.83□□□□□ -1.16
CLNS1A-207ENST00000527133 H2AFB1P0C5Y9 115 aa7.83□□□□□ -1.16
CLNS1A-207ENST00000527133 PMCHP20382 165 aa7.83□□□□□ -1.16
CLNS1A-207ENST00000527133 GNG4P50150 75 aa7.83□□□□□ -1.16
CLNS1A-207ENST00000527133 LCE2DQ5TA82 110 aaPredicted RBP7.83□□□□□ -1.16
CLNS1A-207ENST00000527133 GNG13Q9P2W3 67 aa7.83□□□□□ -1.16
CLNS1A-207ENST00000527133 I3L3M4 83 aa7.82□□□□□ -1.16
CLNS1A-207ENST00000527133 COX7A2LO14548 114 aa7.82□□□□□ -1.16
CLNS1A-207ENST00000527133 UBE2D1P51668 147 aa7.82□□□□□ -1.16
CLNS1A-207ENST00000527133 FOXA3P55318 350 aaPredicted RBP7.82□□□□□ -1.16
CLNS1A-207ENST00000527133 MRAP2Q96G30 205 aa7.82□□□□□ -1.16
CLNS1A-207ENST00000527133 OPRPNQ99935 248 aaPredicted RBP7.82□□□□□ -1.16
CLNS1A-207ENST00000527133 CNFNQ9BYD5 112 aa7.82□□□□□ -1.16
CLNS1A-207ENST00000527133 CDC42SE2Q9NRR3 84 aa7.82□□□□□ -1.16
CLNS1A-207ENST00000527133 BCL2L11O43521 198 aa7.81□□□□□ -1.16
CLNS1A-207ENST00000527133 KRTAP1-4P0C5Y4 121 aa7.81□□□□□ -1.16
CLNS1A-207ENST00000527133 ESDP10768 282 aa7.81□□□□□ -1.16
CLNS1A-207ENST00000527133 CCL20P78556 96 aa7.81□□□□□ -1.16
CLNS1A-207ENST00000527133 KRTAP11-1Q8IUC1 163 aa7.81□□□□□ -1.16
CLNS1A-207ENST00000527133 SMIM12Q96EX1 92 aa7.81□□□□□ -1.16
CLNS1A-207ENST00000527133 MANBALQ9NQG1 85 aa7.81□□□□□ -1.16
CLNS1A-207ENST00000527133 TMEM242Q9NWH2 141 aa7.81□□□□□ -1.16
CLNS1A-207ENST00000527133 TSHBP01222 138 aa7.8□□□□□ -1.16
CLNS1A-207ENST00000527133 TEX261Q6UWH6 196 aa7.8□□□□□ -1.16
CLNS1A-207ENST00000527133 SMIM15Q7Z3B0 74 aa7.8□□□□□ -1.16
CLNS1A-207ENST00000527133 NUDT10Q8NFP7 164 aa7.8□□□□□ -1.16
CLNS1A-207ENST00000527133 NUDT11Q96G61 164 aa7.8□□□□□ -1.16
CLNS1A-207ENST00000527133 TRBV20OR9-2A0A075B6H5 130 aa7.79□□□□□ -1.16
CLNS1A-207ENST00000527133 TRAV1-1A0A0B4J248 108 aa7.79□□□□□ -1.16
CLNS1A-207ENST00000527133 FAM168BA1KXE4 195 aa7.79□□□□□ -1.16
CLNS1A-207ENST00000527133 RGS21Q2M5E4 152 aa7.79□□□□□ -1.16
CLNS1A-207ENST00000527133 MRPL52Q86TS9 123 aaKnown RBP7.79□□□□□ -1.16
CLNS1A-207ENST00000527133 C2orf48Q96LS8 159 aa7.79□□□□□ -1.16
CLNS1A-207ENST00000527133 BIN3Q9NQY0 253 aa7.79□□□□□ -1.16
CLNS1A-207ENST00000527133 TRBV6-5A0A0K0K1A5 114 aa7.78□□□□□ -1.16
CLNS1A-207ENST00000527133 C1orf196B1AJZ1 125 aa7.78□□□□□ -1.16
CLNS1A-207ENST00000527133 SMLR1H3BR10 107 aa7.78□□□□□ -1.16
CLNS1A-207ENST00000527133 RPL13AP40429 203 aaKnown RBP7.78□□□□□ -1.16
CLNS1A-207ENST00000527133 C5orf38Q86SI9 138 aa7.78□□□□□ -1.16
CLNS1A-207ENST00000527133 TSKUQ8WUA8 353 aa7.78□□□□□ -1.16
CLNS1A-207ENST00000527133 RPP21Q9H633 154 aaKnown RBP7.78□□□□□ -1.16
CLNS1A-207ENST00000527133 SPAG11BQ08648 103 aa7.77□□□□□ -1.17
CLNS1A-207ENST00000527133 RNASE13Q5GAN3 156 aaKnown RBP7.77□□□□□ -1.17
CLNS1A-207ENST00000527133 FAM19A5Q7Z5A7 132 aaPredicted RBP7.77□□□□□ -1.17
CLNS1A-207ENST00000527133 RNASE7Q9H1E1 156 aaKnown RBP7.77□□□□□ -1.17
CLNS1A-207ENST00000527133 ST20Q9HBF5 79 aa7.77□□□□□ -1.17
CLNS1A-207ENST00000527133 MED9Q9NWA0 146 aa7.77□□□□□ -1.17
CLNS1A-207ENST00000527133 TRAV13-1A0A0B4J241 112 aa7.76□□□□□ -1.17
CLNS1A-207ENST00000527133 C7orf77A4D0Y5 90 aa7.76□□□□□ -1.17
CLNS1A-207ENST00000527133 TSPAN13O95857 204 aa7.76□□□□□ -1.17
CLNS1A-207ENST00000527133 RNF151Q2KHN1 245 aa7.76□□□□□ -1.17
CLNS1A-207ENST00000527133 PDE6DO43924 150 aa7.75□□□□□ -1.17
CLNS1A-207ENST00000527133 ZNF345Q14585 488 aa7.75□□□□□ -1.17
CLNS1A-207ENST00000527133 IMMP2LQ96T52 175 aa7.74□□□□□ -1.17
CLNS1A-207ENST00000527133 MRPL35Q9NZE8 188 aaKnown RBP7.74□□□□□ -1.17
CLNS1A-207ENST00000527133 KANTRA0A1W2PQU2 76 aa7.73□□□□□ -1.17
CLNS1A-207ENST00000527133 K7EN84 100 aa7.73□□□□□ -1.17
CLNS1A-207ENST00000527133 UBE2BP63146 152 aa7.73□□□□□ -1.17
CLNS1A-207ENST00000527133 MUC17Q685J3 4493 aa7.73□□□□□ -1.17
CLNS1A-207ENST00000527133 TRBV27A0A0K0K1C4 114 aa7.72□□□□□ -1.17
CLNS1A-207ENST00000527133 M0QXV9 152 aa7.72□□□□□ -1.17
CLNS1A-207ENST00000527133 POLR2KP53803 58 aaKnown RBP7.72□□□□□ -1.17
CLNS1A-207ENST00000527133 GAGE2EQ4V326 116 aa7.72□□□□□ -1.17
CLNS1A-207ENST00000527133 OR10D4PQ8NGN7 298 aa7.72□□□□□ -1.17
CLNS1A-207ENST00000527133 ORAOV1Q8WV07 137 aa7.72□□□□□ -1.17
CLNS1A-207ENST00000527133 GAGE2DQ9UEU5 116 aa7.72□□□□□ -1.17
CLNS1A-207ENST00000527133 CARHSP1Q9Y2V2 147 aaKnown RBP7.72□□□□□ -1.17
CLNS1A-207ENST00000527133 UBE2D4Q9Y2X8 147 aa7.72□□□□□ -1.17
CLNS1A-207ENST00000527133 TEX46H3BTG2 121 aa7.71□□□□□ -1.18
CLNS1A-207ENST00000527133 FCER1GP30273 86 aa7.71□□□□□ -1.18
CLNS1A-207ENST00000527133 C10orf25Q5T742 122 aa7.71□□□□□ -1.18
CLNS1A-207ENST00000527133 Q6ZUT4 128 aa7.71□□□□□ -1.18
CLNS1A-207ENST00000527133 KRTAP7-1Q8IUC3 87 aa7.71□□□□□ -1.18
CLNS1A-207ENST00000527133 OCC1Q8TAD7 63 aa7.71□□□□□ -1.18
CLNS1A-207ENST00000527133 CSDC2Q9Y534 153 aaKnown RBP7.71□□□□□ -1.18
CLNS1A-207ENST00000527133 NDUFA1O15239 70 aa7.7□□□□□ -1.18
CLNS1A-207ENST00000527133 TLX1NBP0CAT3 122 aa7.69□□□□□ -1.18
CLNS1A-207ENST00000527133 SMAGPQ0VAQ4 97 aa7.69□□□□□ -1.18
CLNS1A-207ENST00000527133 UNQ6190/PRO20217Q6UXQ8 127 aa7.69□□□□□ -1.18
CLNS1A-207ENST00000527133 SMDT1Q9H4I9 107 aa7.69□□□□□ -1.18
CLNS1A-207ENST00000527133 C6orf48Q9UBA6 75 aa7.69□□□□□ -1.18
CLNS1A-207ENST00000527133 F8WDY8 70 aa7.68□□□□□ -1.18
CLNS1A-207ENST00000527133 VCYO14598 125 aa7.68□□□□□ -1.18
CLNS1A-207ENST00000527133 GATCO43716 136 aaKnown RBP7.68□□□□□ -1.18
CLNS1A-207ENST00000527133 BORCS7Q96B45 105 aa7.68□□□□□ -1.18
CLNS1A-207ENST00000527133 FSIP2Q5CZC0 6907 aa7.67□□□□□ -1.18
CLNS1A-207ENST00000527133 HMSDA8MTL9 139 aa7.67□□□□□ -1.18
CLNS1A-207ENST00000527133 A8MWL6 223 aa7.67□□□□□ -1.18
CLNS1A-207ENST00000527133 SMKR1H3BMG3 65 aa7.67□□□□□ -1.18
CLNS1A-207ENST00000527133 ZNF861PO60384 105 aa7.67□□□□□ -1.18
CLNS1A-207ENST00000527133 RAB4AP20338 218 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms