RNA–Protein interactions for RNA: ENST00000526335.1

C11orf54-203, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 2

Gene C11orf54, Length 1,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-203ENST00000526335 IGKV2-40A0A087WW87 121 aaPredicted RBP3.67□□□□□ -1.82
C11orf54-203ENST00000526335 IGHV3-21A0A0B4J1V1 117 aa3.67□□□□□ -1.82
C11orf54-203ENST00000526335 A0A0J9YX75 114 aa3.67□□□□□ -1.82
C11orf54-203ENST00000526335 K7EIM0 57 aa3.67□□□□□ -1.82
C11orf54-203ENST00000526335 IGKV2D-40P01614 121 aaPredicted RBP3.67□□□□□ -1.82
C11orf54-203ENST00000526335 CCL4P13236 92 aa3.67□□□□□ -1.82
C11orf54-203ENST00000526335 DSCR10P59022 87 aa3.67□□□□□ -1.82
C11orf54-203ENST00000526335 NPC2P61916 151 aa3.67□□□□□ -1.82
C11orf54-203ENST00000526335 ZNF56Q15929 161 aa3.67□□□□□ -1.82
C11orf54-203ENST00000526335 C2orf82Q6UX34 121 aa3.67□□□□□ -1.82
C11orf54-203ENST00000526335 C2orf66Q6UXQ4 117 aa3.67□□□□□ -1.82
C11orf54-203ENST00000526335 POM121L12Q8N7R1 296 aa3.67□□□□□ -1.82
C11orf54-203ENST00000526335 Q8NBF4 154 aa3.67□□□□□ -1.82
C11orf54-203ENST00000526335 DEFB124Q8NES8 71 aa3.67□□□□□ -1.82
C11orf54-203ENST00000526335 ZNRD1Q9P1U0 126 aa3.67□□□□□ -1.82
C11orf54-203ENST00000526335 SPRR3Q9UBC9 169 aa3.67□□□□□ -1.82
C11orf54-203ENST00000526335 CREBBPQ92793 2442 aa3.67□□□□□ -1.82
C11orf54-203ENST00000526335 MED12Q93074 2177 aa3.67□□□□□ -1.82
C11orf54-203ENST00000526335 DOPEY1Q5JWR5 2465 aa3.67□□□□□ -1.82
C11orf54-203ENST00000526335 SPTAN1Q13813 2472 aaKnown RBP3.66□□□□□ -1.82
C11orf54-203ENST00000526335 SEC16AO15027 2179 aa3.66□□□□□ -1.82
C11orf54-203ENST00000526335 IGLV4-3A0A075B6K6 122 aa3.66□□□□□ -1.82
C11orf54-203ENST00000526335 TEX49A0A1B0GTD5 131 aa3.66□□□□□ -1.82
C11orf54-203ENST00000526335 SDHAF1A6NFY7 115 aa3.66□□□□□ -1.82
C11orf54-203ENST00000526335 RPL37AP8A6NKH3 93 aa3.66□□□□□ -1.82
C11orf54-203ENST00000526335 LEPROTO15243 131 aa3.66□□□□□ -1.82
C11orf54-203ENST00000526335 TRGV3P03979 118 aa3.66□□□□□ -1.82
C11orf54-203ENST00000526335 COX6CP09669 75 aa3.66□□□□□ -1.82
C11orf54-203ENST00000526335 MP68P56378 58 aa3.66□□□□□ -1.82
C11orf54-203ENST00000526335 REG3GQ6UW15 175 aa3.66□□□□□ -1.82
C11orf54-203ENST00000526335 UNQ9165/PRO28630Q6UXU0 137 aa3.66□□□□□ -1.82
C11orf54-203ENST00000526335 LINC00643Q86TS7 51 aa3.66□□□□□ -1.82
C11orf54-203ENST00000526335 FAM216BQ8N7L0 139 aa3.66□□□□□ -1.82
C11orf54-203ENST00000526335 KLHL30-AS1Q8NEE0 82 aa3.66□□□□□ -1.82
C11orf54-203ENST00000526335 OCR1Q9BZK8 76 aa3.66□□□□□ -1.82
C11orf54-203ENST00000526335 C16orf95Q9H693 158 aa3.66□□□□□ -1.82
C11orf54-203ENST00000526335 IGSF10Q6WRI0 2623 aa3.66□□□□□ -1.82
C11orf54-203ENST00000526335 F5P12259 2224 aa3.66□□□□□ -1.82
C11orf54-203ENST00000526335 UNC13CQ8NB66 2214 aa3.66□□□□□ -1.82
C11orf54-203ENST00000526335 TEP1Q99973 2627 aaKnown RBP3.66□□□□□ -1.82
C11orf54-203ENST00000526335 IGLV4-69A0A075B6H9 119 aa3.65□□□□□ -1.82
C11orf54-203ENST00000526335 TRAV41A0A0B4J266 112 aa3.65□□□□□ -1.82
C11orf54-203ENST00000526335 IGHV7-4-1A0A0J9YVY3 117 aa3.65□□□□□ -1.82
C11orf54-203ENST00000526335 KRTAP16-1A8MUX0 517 aa3.65□□□□□ -1.82
C11orf54-203ENST00000526335 H0Y9J4 135 aa3.65□□□□□ -1.82
C11orf54-203ENST00000526335 Q1RN00 199 aa3.65□□□□□ -1.82
C11orf54-203ENST00000526335 SPANXN1Q5VSR9 72 aa3.65□□□□□ -1.82
C11orf54-203ENST00000526335 DEFB108BQ8NET1 73 aa3.65□□□□□ -1.82
C11orf54-203ENST00000526335 Q8TAT8 98 aa3.65□□□□□ -1.82
C11orf54-203ENST00000526335 AMELXQ99217 191 aa3.65□□□□□ -1.82
C11orf54-203ENST00000526335 TIMM17AQ99595 171 aa3.65□□□□□ -1.82
C11orf54-203ENST00000526335 DPH3P1Q9H4G8 78 aa3.65□□□□□ -1.82
C11orf54-203ENST00000526335 CTSZQ9UBR2 303 aa3.65□□□□□ -1.82
C11orf54-203ENST00000526335 SLC25A15Q9Y619 301 aa3.65□□□□□ -1.82
C11orf54-203ENST00000526335 APC2O95996 2303 aa3.65□□□□□ -1.82
C11orf54-203ENST00000526335 ABCA12Q86UK0 2595 aa3.65□□□□□ -1.83
C11orf54-203ENST00000526335 ASPMQ8IZT6 3477 aa3.65□□□□□ -1.83
C11orf54-203ENST00000526335 DIDO1Q9BTC0 2240 aaKnown RBP3.65□□□□□ -1.83
C11orf54-203ENST00000526335 TRAV17A0A0B4J275 112 aa3.64□□□□□ -1.83
C11orf54-203ENST00000526335 TRBV27A0A0K0K1C4 114 aa3.64□□□□□ -1.83
C11orf54-203ENST00000526335 TMEM223A0PJW6 202 aa3.64□□□□□ -1.83
C11orf54-203ENST00000526335 H7C423 109 aa3.64□□□□□ -1.83
C11orf54-203ENST00000526335 ATOX1O00244 68 aa3.64□□□□□ -1.83
C11orf54-203ENST00000526335 LST1O00453 97 aa3.64□□□□□ -1.83
C11orf54-203ENST00000526335 IGHV1-46P01743 117 aa3.64□□□□□ -1.83
C11orf54-203ENST00000526335 CCL3L1P16619 93 aa3.64□□□□□ -1.83
C11orf54-203ENST00000526335 PRR3P79522 188 aaKnown RBP3.64□□□□□ -1.83
C11orf54-203ENST00000526335 LCA10Q71F78 164 aa3.64□□□□□ -1.83
C11orf54-203ENST00000526335 FAM19A3Q7Z5A8 133 aa3.64□□□□□ -1.83
C11orf54-203ENST00000526335 MUSTN1Q8IVN3 82 aa3.64□□□□□ -1.83
C11orf54-203ENST00000526335 C3orf56Q8N813 242 aa3.64□□□□□ -1.83
C11orf54-203ENST00000526335 DCANP1Q8TF63 244 aa3.64□□□□□ -1.83
C11orf54-203ENST00000526335 LENEPQ9Y5L5 61 aa3.64□□□□□ -1.83
C11orf54-203ENST00000526335 PTPRQQ9UMZ3 2332 aa3.64□□□□□ -1.83
C11orf54-203ENST00000526335 ZZEF1O43149 2961 aa3.64□□□□□ -1.83
C11orf54-203ENST00000526335 DSPP15924 2871 aaKnown RBP3.64□□□□□ -1.83
C11orf54-203ENST00000526335 FRYQ5TBA9 3013 aa3.64□□□□□ -1.83
C11orf54-203ENST00000526335 COL6A6A6NMZ7 2263 aa3.64□□□□□ -1.83
C11orf54-203ENST00000526335 IGIPA6NJ69 53 aa3.63□□□□□ -1.83
C11orf54-203ENST00000526335 M0R378 163 aa3.63□□□□□ -1.83
C11orf54-203ENST00000526335 IGHV1-69P01742 117 aa3.63□□□□□ -1.83
C11orf54-203ENST00000526335 IGHV1-8P0DP01 117 aa3.63□□□□□ -1.83
C11orf54-203ENST00000526335 TSPEAR-AS2P59090 65 aa3.63□□□□□ -1.83
C11orf54-203ENST00000526335 SDIM1Q6ZPB5 146 aa3.63□□□□□ -1.83
C11orf54-203ENST00000526335 C5orf38Q86SI9 138 aa3.63□□□□□ -1.83
C11orf54-203ENST00000526335 DYNAPQ8N1N2 210 aa3.63□□□□□ -1.83
C11orf54-203ENST00000526335 CNEP1R1Q8N9A8 125 aa3.63□□□□□ -1.83
C11orf54-203ENST00000526335 KLK5Q9Y337 293 aaPredicted RBP3.63□□□□□ -1.83
C11orf54-203ENST00000526335 ICOSQ9Y6W8 199 aa3.63□□□□□ -1.83
C11orf54-203ENST00000526335 MYO9AB2RTY4 2548 aa3.63□□□□□ -1.83
C11orf54-203ENST00000526335 SPEGQ15772 3267 aa3.63□□□□□ -1.83
C11orf54-203ENST00000526335 CACNA1EQ15878 2313 aa3.63□□□□□ -1.83
C11orf54-203ENST00000526335 ASCC3Q8N3C0 2202 aaKnown RBP3.63□□□□□ -1.83
C11orf54-203ENST00000526335 FRYLO94915 3013 aa3.63□□□□□ -1.83
C11orf54-203ENST00000526335 IGLV11-55A0A075B6I3 123 aa3.63□□□□□ -1.83
C11orf54-203ENST00000526335 IGHV3OR16-12A0A075B7B8 117 aa3.63□□□□□ -1.83
C11orf54-203ENST00000526335 IGHV1-3A0A0C4DH29 117 aa3.63□□□□□ -1.83
C11orf54-203ENST00000526335 A8MUN3 132 aa3.63□□□□□ -1.83
C11orf54-203ENST00000526335 SOCS3O14543 225 aa3.63□□□□□ -1.83
C11orf54-203ENST00000526335 PSPHP1O15172 72 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms