RNA–Protein interactions for RNA: ENST00000526055.5

TSPAN4-216, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 469 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-216ENST00000526055 TMEM242Q9NWH2 141 aa11.94□□□□□ -0.5
TSPAN4-216ENST00000526055 SRRM2Q9UQ35 2752 aaKnown RBP11.94□□□□□ -0.5
TSPAN4-216ENST00000526055 HBBP68871 147 aa11.93□□□□□ -0.5
TSPAN4-216ENST00000526055 MRPL52Q86TS9 123 aaKnown RBP11.93□□□□□ -0.5
TSPAN4-216ENST00000526055 NRACQ8N912 160 aa11.93□□□□□ -0.5
TSPAN4-216ENST00000526055 OR5A1Q8NGJ0 315 aa11.93□□□□□ -0.5
TSPAN4-216ENST00000526055 IMMP2LQ96T52 175 aa11.93□□□□□ -0.5
TSPAN4-216ENST00000526055 AP5S1Q9NUS5 200 aa11.93□□□□□ -0.5
TSPAN4-216ENST00000526055 hDV102S1A0JD36 115 aa11.92□□□□□ -0.5
TSPAN4-216ENST00000526055 C7orf77A4D0Y5 90 aa11.92□□□□□ -0.5
TSPAN4-216ENST00000526055 SUMO2P61956 95 aaKnown RBP11.92□□□□□ -0.5
TSPAN4-216ENST00000526055 SMAGPQ0VAQ4 97 aa11.92□□□□□ -0.5
TSPAN4-216ENST00000526055 LINC00528Q8N1L1 170 aa11.92□□□□□ -0.5
TSPAN4-216ENST00000526055 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.91□□□□□ -0.5
TSPAN4-216ENST00000526055 GAGE12HA6NDE8 117 aa11.91□□□□□ -0.5
TSPAN4-216ENST00000526055 CAMPP49913 170 aa11.91□□□□□ -0.5
TSPAN4-216ENST00000526055 RHEBQ15382 184 aa11.91□□□□□ -0.5
TSPAN4-216ENST00000526055 MRPL54Q6P161 138 aaKnown RBP11.91□□□□□ -0.5
TSPAN4-216ENST00000526055 CIRBP-AS1Q8TBR5 109 aa11.91□□□□□ -0.5
TSPAN4-216ENST00000526055 CHCHD10Q8WYQ3 142 aaPredicted RBP11.91□□□□□ -0.5
TSPAN4-216ENST00000526055 KIR2DL4Q99706 377 aa11.91□□□□□ -0.5
TSPAN4-216ENST00000526055 C20orf78Q9BR46 151 aa11.91□□□□□ -0.5
TSPAN4-216ENST00000526055 TRBV24-1A0A075B6N3 115 aa11.9□□□□□ -0.5
TSPAN4-216ENST00000526055 IGKV3OR2-268A0A0C4DH90 116 aa11.9□□□□□ -0.5
TSPAN4-216ENST00000526055 SMKR1H3BMG3 65 aa11.9□□□□□ -0.5
TSPAN4-216ENST00000526055 TCAPO15273 167 aa11.9□□□□□ -0.5
TSPAN4-216ENST00000526055 FCER1GP30273 86 aa11.9□□□□□ -0.5
TSPAN4-216ENST00000526055 RPL32P62910 135 aaKnown RBP11.9□□□□□ -0.5
TSPAN4-216ENST00000526055 MRPL51Q4U2R6 128 aaKnown RBP11.9□□□□□ -0.5
TSPAN4-216ENST00000526055 A0A1B0GXF2 115 aa11.89□□□□□ -0.51
TSPAN4-216ENST00000526055 CSDC2Q9Y534 153 aaKnown RBP11.89□□□□□ -0.51
TSPAN4-216ENST00000526055 TRAV9-1A0A075B6T8 112 aa11.88□□□□□ -0.51
TSPAN4-216ENST00000526055 SNAPINO95295 136 aa11.88□□□□□ -0.51
TSPAN4-216ENST00000526055 APOC3P02656 99 aa11.88□□□□□ -0.51
TSPAN4-216ENST00000526055 S100PP25815 95 aa11.88□□□□□ -0.51
TSPAN4-216ENST00000526055 CKS2P33552 79 aa11.88□□□□□ -0.51
TSPAN4-216ENST00000526055 SDIM1Q6ZPB5 146 aa11.88□□□□□ -0.51
TSPAN4-216ENST00000526055 SVBPQ8N300 66 aa11.88□□□□□ -0.51
TSPAN4-216ENST00000526055 CDC42SE2Q9NRR3 84 aa11.88□□□□□ -0.51
TSPAN4-216ENST00000526055 PPBPP02775 128 aa11.87□□□□□ -0.51
TSPAN4-216ENST00000526055 C15orf56Q8N910 161 aa11.87□□□□□ -0.51
TSPAN4-216ENST00000526055 TMEM18Q96B42 140 aa11.87□□□□□ -0.51
TSPAN4-216ENST00000526055 IGHV3-64A0A075B6Q5 118 aa11.86□□□□□ -0.51
TSPAN4-216ENST00000526055 LINC00959A0A1B0GUT2 108 aa11.86□□□□□ -0.51
TSPAN4-216ENST00000526055 PHOX2AO14813 284 aa11.86□□□□□ -0.51
TSPAN4-216ENST00000526055 CCL25O15444 150 aa11.86□□□□□ -0.51
TSPAN4-216ENST00000526055 FOXI1Q12951 378 aa11.86□□□□□ -0.51
TSPAN4-216ENST00000526055 ZNF664Q8N3J9 261 aa11.86□□□□□ -0.51
TSPAN4-216ENST00000526055 RPS10P5Q9NQ39 176 aa11.86□□□□□ -0.51
TSPAN4-216ENST00000526055 FLG2Q5D862 2391 aaPredicted RBP11.85□□□□□ -0.51
TSPAN4-216ENST00000526055 SS18Q15532 418 aa11.85□□□□□ -0.51
TSPAN4-216ENST00000526055 HERC1Q15751 4861 aa11.84□□□□□ -0.51
TSPAN4-216ENST00000526055 GVQW2A0A096LPI5 108 aaPredicted RBP11.84□□□□□ -0.51
TSPAN4-216ENST00000526055 TNFRSF6BO95407 300 aa11.84□□□□□ -0.51
TSPAN4-216ENST00000526055 SLPIP03973 132 aa11.84□□□□□ -0.51
TSPAN4-216ENST00000526055 CIRBPQ14011 172 aaKnown RBP11.84□□□□□ -0.51
TSPAN4-216ENST00000526055 TIMM21Q9BVV7 248 aa11.84□□□□□ -0.51
TSPAN4-216ENST00000526055 MYCBP2O75592 4640 aa11.83□□□□□ -0.51
TSPAN4-216ENST00000526055 D6R8Y8 96 aa11.83□□□□□ -0.52
TSPAN4-216ENST00000526055 XCL1P47992 114 aa11.83□□□□□ -0.52
TSPAN4-216ENST00000526055 CD164L2Q6UWJ8 174 aa11.83□□□□□ -0.52
TSPAN4-216ENST00000526055 UBE2D4Q9Y2X8 147 aa11.83□□□□□ -0.52
TSPAN4-216ENST00000526055 SMIM2Q9BVW6 85 aa11.82□□□□□ -0.52
TSPAN4-216ENST00000526055 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.82□□□□□ -0.52
TSPAN4-216ENST00000526055 IGHV1-58A0A0C4DH39 117 aa11.81□□□□□ -0.52
TSPAN4-216ENST00000526055 C1orf196B1AJZ1 125 aa11.81□□□□□ -0.52
TSPAN4-216ENST00000526055 SLC7A5P1Q8MH63 180 aa11.81□□□□□ -0.52
TSPAN4-216ENST00000526055 ORMDL3Q8N138 153 aa11.81□□□□□ -0.52
TSPAN4-216ENST00000526055 COX19Q49B96 90 aa11.8□□□□□ -0.52
TSPAN4-216ENST00000526055 HIGD2BQ4VC39 106 aa11.8□□□□□ -0.52
TSPAN4-216ENST00000526055 PKIGQ9Y2B9 76 aa11.8□□□□□ -0.52
TSPAN4-216ENST00000526055 NPYP01303 97 aa11.79□□□□□ -0.52
TSPAN4-216ENST00000526055 LAMTOR2Q9Y2Q5 125 aa11.79□□□□□ -0.52
TSPAN4-216ENST00000526055 KRTAP10-4P60372 401 aaPredicted RBP11.78□□□□□ -0.52
TSPAN4-216ENST00000526055 TMEM136Q6ZRR5 245 aa11.78□□□□□ -0.52
TSPAN4-216ENST00000526055 SPANXA1Q9NS26 97 aa11.78□□□□□ -0.52
TSPAN4-216ENST00000526055 PANO1I0J062 215 aa11.77□□□□□ -0.53
TSPAN4-216ENST00000526055 SPACA4Q8TDM5 124 aa11.77□□□□□ -0.53
TSPAN4-216ENST00000526055 PRSS47A8MTI9 375 aa11.76□□□□□ -0.53
TSPAN4-216ENST00000526055 PRELID3AQ96N28 172 aa11.76□□□□□ -0.53
TSPAN4-216ENST00000526055 COX7A2LO14548 114 aa11.75□□□□□ -0.53
TSPAN4-216ENST00000526055 RAB5AP20339 215 aa11.75□□□□□ -0.53
TSPAN4-216ENST00000526055 RPL37AP61513 92 aaKnown RBP11.75□□□□□ -0.53
TSPAN4-216ENST00000526055 MRPS36P82909 103 aaKnown RBP11.75□□□□□ -0.53
TSPAN4-216ENST00000526055 Q6ZUT4 128 aa11.75□□□□□ -0.53
TSPAN4-216ENST00000526055 DPH3Q96FX2 82 aa11.75□□□□□ -0.53
TSPAN4-216ENST00000526055 GNB1LQ9BYB4 327 aa11.75□□□□□ -0.53
TSPAN4-216ENST00000526055 TRAV13-1A0A0B4J241 112 aa11.74□□□□□ -0.53
TSPAN4-216ENST00000526055 ZNF561-AS1K7EIQ3 104 aa11.74□□□□□ -0.53
TSPAN4-216ENST00000526055 MT-ND6P03923 174 aa11.74□□□□□ -0.53
TSPAN4-216ENST00000526055 MALP21145 153 aa11.74□□□□□ -0.53
TSPAN4-216ENST00000526055 COX6A2Q02221 97 aa11.74□□□□□ -0.53
TSPAN4-216ENST00000526055 A0A087WYN8 130 aa11.73□□□□□ -0.53
TSPAN4-216ENST00000526055 RPL39P62891 51 aaKnown RBP11.73□□□□□ -0.53
TSPAN4-216ENST00000526055 PLAC8Q9NZF1 115 aa11.73□□□□□ -0.53
TSPAN4-216ENST00000526055 LINC00474Q9P2X8 69 aa11.73□□□□□ -0.53
TSPAN4-216ENST00000526055 KRTAP29-1A8MX34 341 aaPredicted RBP11.72□□□□□ -0.53
TSPAN4-216ENST00000526055 RNASE13Q5GAN3 156 aaKnown RBP11.72□□□□□ -0.53
TSPAN4-216ENST00000526055 CARD19Q96LW7 228 aa11.72□□□□□ -0.53
TSPAN4-216ENST00000526055 APOMO95445 188 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms