RNA–Protein interactions for RNA: ENST00000525459.1

PTPRK-218, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2 BASIC

Gene PTPRK, Length 1,722 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-218ENST00000525459 LINC00614P0C842 121 aa12.55□□□□□ -0.4
PTPRK-218ENST00000525459 RPL39P62891 51 aaKnown RBP12.55□□□□□ -0.4
PTPRK-218ENST00000525459 C1orf43Q9BWL3 253 aa12.55□□□□□ -0.4
PTPRK-218ENST00000525459 HYDINQ4G0P3 5121 aa12.54□□□□□ -0.4
PTPRK-218ENST00000525459 RTL8CO15255 209 aa12.54□□□□□ -0.4
PTPRK-218ENST00000525459 ENHOQ6UWT2 76 aa12.54□□□□□ -0.4
PTPRK-218ENST00000525459 Q6ZRN7 208 aaPredicted RBP12.54□□□□□ -0.4
PTPRK-218ENST00000525459 ZNF664Q8N3J9 261 aa12.54□□□□□ -0.4
PTPRK-218ENST00000525459 CDC42SE2Q9NRR3 84 aa12.54□□□□□ -0.4
PTPRK-218ENST00000525459 MRPS36P82909 103 aaKnown RBP12.54□□□□□ -0.4
PTPRK-218ENST00000525459 PSCAO43653 123 aa12.53□□□□□ -0.4
PTPRK-218ENST00000525459 CHCHD1Q96BP2 118 aaKnown RBP12.53□□□□□ -0.4
PTPRK-218ENST00000525459 CLPSL2Q6UWE3 100 aa12.52□□□□□ -0.41
PTPRK-218ENST00000525459 TOMM6Q96B49 74 aa12.52□□□□□ -0.41
PTPRK-218ENST00000525459 IGKV2D-24A0A075B6R9 120 aa12.51□□□□□ -0.41
PTPRK-218ENST00000525459 CCL25O15444 150 aa12.51□□□□□ -0.41
PTPRK-218ENST00000525459 PAPPA-AS1Q5QFB9 102 aa12.51□□□□□ -0.41
PTPRK-218ENST00000525459 BAGE3Q86Y29 109 aa12.51□□□□□ -0.41
PTPRK-218ENST00000525459 TIMM17AQ99595 171 aa12.51□□□□□ -0.41
PTPRK-218ENST00000525459 Q6ZN92 141 aa12.5□□□□□ -0.41
PTPRK-218ENST00000525459 Q6ZUT4 128 aa12.5□□□□□ -0.41
PTPRK-218ENST00000525459 URB1-AS1Q96HZ7 61 aa12.5□□□□□ -0.41
PTPRK-218ENST00000525459 TMEM141Q96I45 108 aa12.49□□□□□ -0.41
PTPRK-218ENST00000525459 PRSS29PA6NIE9 313 aa12.48□□□□□ -0.41
PTPRK-218ENST00000525459 HBDP02042 147 aa12.48□□□□□ -0.41
PTPRK-218ENST00000525459 ERASQ7Z444 233 aa12.48□□□□□ -0.41
PTPRK-218ENST00000525459 SS18Q15532 418 aa12.48□□□□□ -0.41
PTPRK-218ENST00000525459 IGLV4-3A0A075B6K6 122 aa12.47□□□□□ -0.41
PTPRK-218ENST00000525459 IGIPA6NJ69 53 aa12.47□□□□□ -0.41
PTPRK-218ENST00000525459 IGKV3OR2-268A0A0C4DH90 116 aa12.46□□□□□ -0.41
PTPRK-218ENST00000525459 LINC00959A0A1B0GUT2 108 aa12.46□□□□□ -0.41
PTPRK-218ENST00000525459 HSBP1O75506 76 aa12.46□□□□□ -0.41
PTPRK-218ENST00000525459 TEX43Q6ZNM6 134 aa12.46□□□□□ -0.41
PTPRK-218ENST00000525459 SCGB3A1Q96QR1 104 aa12.46□□□□□ -0.41
PTPRK-218ENST00000525459 C2orf88Q9BSF0 95 aa12.46□□□□□ -0.41
PTPRK-218ENST00000525459 RYR3Q15413 4870 aa12.46□□□□□ -0.42
PTPRK-218ENST00000525459 C1orf196B1AJZ1 125 aa12.45□□□□□ -0.42
PTPRK-218ENST00000525459 EREGO14944 169 aa12.45□□□□□ -0.42
PTPRK-218ENST00000525459 HIST1H2BKO60814 126 aa12.45□□□□□ -0.42
PTPRK-218ENST00000525459 HIST1H2BJP06899 126 aa12.45□□□□□ -0.42
PTPRK-218ENST00000525459 HIST1H2BOP23527 126 aa12.45□□□□□ -0.42
PTPRK-218ENST00000525459 HIST1H2BBP33778 126 aa12.45□□□□□ -0.42
PTPRK-218ENST00000525459 HIST1H2BDP58876 126 aa12.45□□□□□ -0.42
PTPRK-218ENST00000525459 HIST1H2BCP62807 126 aa12.45□□□□□ -0.42
PTPRK-218ENST00000525459 HIST2H2BEQ16778 126 aa12.45□□□□□ -0.42
PTPRK-218ENST00000525459 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.45□□□□□ -0.42
PTPRK-218ENST00000525459 HIST1H2BHQ93079 126 aa12.45□□□□□ -0.42
PTPRK-218ENST00000525459 HIST1H2BNQ99877 126 aa12.45□□□□□ -0.42
PTPRK-218ENST00000525459 HIST1H2BMQ99879 126 aa12.45□□□□□ -0.42
PTPRK-218ENST00000525459 IGLV10-54A0A075B6I4 117 aa12.45□□□□□ -0.42
PTPRK-218ENST00000525459 IFITM10A6NMD0 228 aa12.44□□□□□ -0.42
PTPRK-218ENST00000525459 CHCHD10Q8WYQ3 142 aaPredicted RBP12.44□□□□□ -0.42
PTPRK-218ENST00000525459 FAM104AQ969W3 186 aa12.44□□□□□ -0.42
PTPRK-218ENST00000525459 A0A096LNJ9 63 aa12.43□□□□□ -0.42
PTPRK-218ENST00000525459 TNP2Q05952 138 aa12.43□□□□□ -0.42
PTPRK-218ENST00000525459 RNASE13Q5GAN3 156 aaKnown RBP12.43□□□□□ -0.42
PTPRK-218ENST00000525459 VCX2Q9H322 139 aa12.43□□□□□ -0.42
PTPRK-218ENST00000525459 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-218ENST00000525459 KRTAP26-1Q6PEX3 210 aa12.42□□□□□ -0.42
PTPRK-218ENST00000525459 AMELXQ99217 191 aa12.42□□□□□ -0.42
PTPRK-218ENST00000525459 OPRPNQ99935 248 aaPredicted RBP12.42□□□□□ -0.42
PTPRK-218ENST00000525459 SERF1AO75920 110 aa12.42□□□□□ -0.42
PTPRK-218ENST00000525459 ATP5LO75964 103 aa12.42□□□□□ -0.42
PTPRK-218ENST00000525459 A0A087WTM6 91 aa12.41□□□□□ -0.42
PTPRK-218ENST00000525459 TRAV13-1A0A0B4J241 112 aa12.41□□□□□ -0.42
PTPRK-218ENST00000525459 C14orf177Q52M58 125 aa12.4□□□□□ -0.42
PTPRK-218ENST00000525459 PDZD11Q5EBL8 140 aa12.4□□□□□ -0.42
PTPRK-218ENST00000525459 CD164L2Q6UWJ8 174 aa12.4□□□□□ -0.42
PTPRK-218ENST00000525459 LRCOL1A6NCL2 159 aa12.4□□□□□ -0.43
PTPRK-218ENST00000525459 PMCHL1Q16048 86 aa12.4□□□□□ -0.43
PTPRK-218ENST00000525459 FRAS1Q86XX4 4008 aa12.39□□□□□ -0.43
PTPRK-218ENST00000525459 GAGE12HA6NDE8 117 aa12.39□□□□□ -0.43
PTPRK-218ENST00000525459 XCL1P47992 114 aa12.39□□□□□ -0.43
PTPRK-218ENST00000525459 SEC11AP67812 179 aa12.39□□□□□ -0.43
PTPRK-218ENST00000525459 LINC00173Q6ZV60 143 aa12.39□□□□□ -0.43
PTPRK-218ENST00000525459 MAPKAPK5-AS1Q8N8E1 139 aa12.39□□□□□ -0.43
PTPRK-218ENST00000525459 LINC00310P59036 64 aa12.38□□□□□ -0.43
PTPRK-218ENST00000525459 UBE2D1P51668 147 aa12.37□□□□□ -0.43
PTPRK-218ENST00000525459 FOXI1Q12951 378 aa12.37□□□□□ -0.43
PTPRK-218ENST00000525459 PMVKQ15126 192 aa12.37□□□□□ -0.43
PTPRK-218ENST00000525459 CFAP161Q6P656 301 aa12.37□□□□□ -0.43
PTPRK-218ENST00000525459 FAM19A3Q7Z5A8 133 aa12.37□□□□□ -0.43
PTPRK-218ENST00000525459 BAALCQ8WXS3 180 aa12.37□□□□□ -0.43
PTPRK-218ENST00000525459 DNAH2Q9P225 4427 aa12.37□□□□□ -0.43
PTPRK-218ENST00000525459 COA6Q5JTJ3 125 aaKnown RBP12.36□□□□□ -0.43
PTPRK-218ENST00000525459 A0A1B0GVY2 172 aa12.35□□□□□ -0.43
PTPRK-218ENST00000525459 Q8N814 137 aa12.35□□□□□ -0.43
PTPRK-218ENST00000525459 USP17L23D6RBM5 183 aa12.34□□□□□ -0.43
PTPRK-218ENST00000525459 CDPF1Q6NVV7 123 aa12.34□□□□□ -0.43
PTPRK-218ENST00000525459 FAM19A2Q8N3H0 131 aa12.34□□□□□ -0.43
PTPRK-218ENST00000525459 NTN5Q8WTR8 489 aaPredicted RBP12.34□□□□□ -0.43
PTPRK-218ENST00000525459 COX7A2LO14548 114 aa12.34□□□□□ -0.43
PTPRK-218ENST00000525459 LEPROTL1O95214 131 aa12.34□□□□□ -0.43
PTPRK-218ENST00000525459 HERVK_113P63121 156 aa12.34□□□□□ -0.43
PTPRK-218ENST00000525459 LINC00242Q5T6M2 205 aa12.34□□□□□ -0.43
PTPRK-218ENST00000525459 PACRGQ96M98 296 aaPredicted RBP12.34□□□□□ -0.43
PTPRK-218ENST00000525459 IFI27L1Q96BM0 104 aa12.33□□□□□ -0.44
PTPRK-218ENST00000525459 CST9LQ9H4G1 147 aa12.33□□□□□ -0.44
PTPRK-218ENST00000525459 HSPB8Q9UJY1 196 aa12.33□□□□□ -0.44
PTPRK-218ENST00000525459 IGHV3OR16-9A0A0B4J2B5 98 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms