RNA–Protein interactions for RNA: ENST00000525201.5

TSPAN4-214, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-214ENST00000525201 IGHV3-64A0A075B6Q5 118 aa11.26□□□□□ -0.61
TSPAN4-214ENST00000525201 GAGE12HA6NDE8 117 aa11.26□□□□□ -0.61
TSPAN4-214ENST00000525201 TCAPO15273 167 aa11.26□□□□□ -0.61
TSPAN4-214ENST00000525201 TSHBP01222 138 aa11.26□□□□□ -0.61
TSPAN4-214ENST00000525201 CIRBP-AS1Q8TBR5 109 aa11.26□□□□□ -0.61
TSPAN4-214ENST00000525201 ESDP10768 282 aa11.25□□□□□ -0.61
TSPAN4-214ENST00000525201 POLR2KP53803 58 aaKnown RBP11.25□□□□□ -0.61
TSPAN4-214ENST00000525201 SUMO2P61956 95 aaKnown RBP11.25□□□□□ -0.61
TSPAN4-214ENST00000525201 MRPL52Q86TS9 123 aaKnown RBP11.25□□□□□ -0.61
TSPAN4-214ENST00000525201 SVBPQ8N300 66 aa11.25□□□□□ -0.61
TSPAN4-214ENST00000525201 CHCHD10Q8WYQ3 142 aaPredicted RBP11.25□□□□□ -0.61
TSPAN4-214ENST00000525201 TMEM18Q96B42 140 aa11.25□□□□□ -0.61
TSPAN4-214ENST00000525201 PKIGQ9Y2B9 76 aa11.25□□□□□ -0.61
TSPAN4-214ENST00000525201 MT-ND4LP03901 98 aa11.24□□□□□ -0.61
TSPAN4-214ENST00000525201 SNAPINO95295 136 aa11.23□□□□□ -0.61
TSPAN4-214ENST00000525201 RPS10P46783 165 aaKnown RBP11.23□□□□□ -0.61
TSPAN4-214ENST00000525201 CAMPP49913 170 aa11.23□□□□□ -0.61
TSPAN4-214ENST00000525201 HBBP68871 147 aa11.23□□□□□ -0.61
TSPAN4-214ENST00000525201 RHEBQ15382 184 aa11.23□□□□□ -0.61
TSPAN4-214ENST00000525201 SS18Q15532 418 aa11.23□□□□□ -0.61
TSPAN4-214ENST00000525201 FAM104BQ5XKR9 115 aa11.23□□□□□ -0.61
TSPAN4-214ENST00000525201 CTDSP1Q9GZU7 261 aa11.23□□□□□ -0.61
TSPAN4-214ENST00000525201 C20orf78Q9BR46 151 aa11.22□□□□□ -0.61
TSPAN4-214ENST00000525201 CCL25O15444 150 aa11.21□□□□□ -0.61
TSPAN4-214ENST00000525201 CKS2P33552 79 aa11.21□□□□□ -0.61
TSPAN4-214ENST00000525201 RPS10P5Q9NQ39 176 aa11.21□□□□□ -0.61
TSPAN4-214ENST00000525201 CSDC2Q9Y534 153 aaKnown RBP11.21□□□□□ -0.61
TSPAN4-214ENST00000525201 GAS8-AS1O95177 125 aa11.2□□□□□ -0.62
TSPAN4-214ENST00000525201 PPBPP02775 128 aa11.2□□□□□ -0.62
TSPAN4-214ENST00000525201 SDIM1Q6ZPB5 146 aa11.2□□□□□ -0.62
TSPAN4-214ENST00000525201 ATP5L2Q7Z4Y8 100 aa11.2□□□□□ -0.62
TSPAN4-214ENST00000525201 ZNF664Q8N3J9 261 aa11.2□□□□□ -0.62
TSPAN4-214ENST00000525201 NRACQ8N912 160 aa11.2□□□□□ -0.62
TSPAN4-214ENST00000525201 GVQW2A0A096LPI5 108 aaPredicted RBP11.19□□□□□ -0.62
TSPAN4-214ENST00000525201 LINC00959A0A1B0GUT2 108 aa11.19□□□□□ -0.62
TSPAN4-214ENST00000525201 SMKR1H3BMG3 65 aa11.19□□□□□ -0.62
TSPAN4-214ENST00000525201 XCL1P47992 114 aa11.19□□□□□ -0.62
TSPAN4-214ENST00000525201 RPL32P62910 135 aaKnown RBP11.19□□□□□ -0.62
TSPAN4-214ENST00000525201 MRPL51Q4U2R6 128 aaKnown RBP11.19□□□□□ -0.62
TSPAN4-214ENST00000525201 C15orf56Q8N910 161 aa11.19□□□□□ -0.62
TSPAN4-214ENST00000525201 CDC42SE2Q9NRR3 84 aa11.19□□□□□ -0.62
TSPAN4-214ENST00000525201 TRBV24-1A0A075B6N3 115 aa11.18□□□□□ -0.62
TSPAN4-214ENST00000525201 IGHV1-58A0A0C4DH39 117 aa11.18□□□□□ -0.62
TSPAN4-214ENST00000525201 ATP6V1G1O75348 118 aa11.18□□□□□ -0.62
TSPAN4-214ENST00000525201 IMMP2LQ96T52 175 aa11.18□□□□□ -0.62
TSPAN4-214ENST00000525201 C1orf196B1AJZ1 125 aa11.17□□□□□ -0.62
TSPAN4-214ENST00000525201 J3QL48 77 aa11.17□□□□□ -0.62
TSPAN4-214ENST00000525201 PHOX2AO14813 284 aa11.17□□□□□ -0.62
TSPAN4-214ENST00000525201 RPL37AP61513 92 aaKnown RBP11.17□□□□□ -0.62
TSPAN4-214ENST00000525201 FOXI1Q12951 378 aa11.17□□□□□ -0.62
TSPAN4-214ENST00000525201 MRPL54Q6P161 138 aaKnown RBP11.17□□□□□ -0.62
TSPAN4-214ENST00000525201 CD164L2Q6UWJ8 174 aa11.17□□□□□ -0.62
TSPAN4-214ENST00000525201 DPH3Q96FX2 82 aa11.17□□□□□ -0.62
TSPAN4-214ENST00000525201 VPS13BQ7Z7G8 4022 aa11.16□□□□□ -0.62
TSPAN4-214ENST00000525201 CIRBPQ14011 172 aaKnown RBP11.16□□□□□ -0.62
TSPAN4-214ENST00000525201 HIGD2BQ4VC39 106 aa11.16□□□□□ -0.62
TSPAN4-214ENST00000525201 TIMM21Q9BVV7 248 aa11.16□□□□□ -0.62
TSPAN4-214ENST00000525201 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.16□□□□□ -0.62
TSPAN4-214ENST00000525201 SRRM2Q9UQ35 2752 aaKnown RBP11.15□□□□□ -0.62
TSPAN4-214ENST00000525201 A0A1B0GXF2 115 aa11.15□□□□□ -0.62
TSPAN4-214ENST00000525201 TNFRSF6BO95407 300 aa11.15□□□□□ -0.62
TSPAN4-214ENST00000525201 S100A1P23297 94 aa11.15□□□□□ -0.62
TSPAN4-214ENST00000525201 SMIM2Q9BVW6 85 aa11.15□□□□□ -0.62
TSPAN4-214ENST00000525201 UBE2D4Q9Y2X8 147 aa11.15□□□□□ -0.62
TSPAN4-214ENST00000525201 D6R8Y8 96 aa11.14□□□□□ -0.63
TSPAN4-214ENST00000525201 MALP21145 153 aa11.14□□□□□ -0.63
TSPAN4-214ENST00000525201 ORMDL3Q8N138 153 aa11.14□□□□□ -0.63
TSPAN4-214ENST00000525201 LINC00474Q9P2X8 69 aa11.14□□□□□ -0.63
TSPAN4-214ENST00000525201 FAT1Q14517 4588 aa11.13□□□□□ -0.63
TSPAN4-214ENST00000525201 ZNF561-AS1K7EIQ3 104 aa11.13□□□□□ -0.63
TSPAN4-214ENST00000525201 SPACA4Q8TDM5 124 aa11.13□□□□□ -0.63
TSPAN4-214ENST00000525201 SLPIP03973 132 aa11.12□□□□□ -0.63
TSPAN4-214ENST00000525201 RAB5AP20339 215 aa11.12□□□□□ -0.63
TSPAN4-214ENST00000525201 SPANXA1Q9NS26 97 aa11.12□□□□□ -0.63
TSPAN4-214ENST00000525201 LAMTOR2Q9Y2Q5 125 aa11.12□□□□□ -0.63
TSPAN4-214ENST00000525201 DNAH8Q96JB1 4490 aa11.11□□□□□ -0.63
TSPAN4-214ENST00000525201 KRTAP29-1A8MX34 341 aaPredicted RBP11.11□□□□□ -0.63
TSPAN4-214ENST00000525201 COX7A2LO14548 114 aa11.11□□□□□ -0.63
TSPAN4-214ENST00000525201 APOMO95445 188 aa11.11□□□□□ -0.63
TSPAN4-214ENST00000525201 CARD19Q96LW7 228 aa11.11□□□□□ -0.63
TSPAN4-214ENST00000525201 TRAV9-1A0A075B6T8 112 aa11.1□□□□□ -0.63
TSPAN4-214ENST00000525201 S100PP25815 95 aa11.1□□□□□ -0.63
TSPAN4-214ENST00000525201 COX6A2Q02221 97 aa11.1□□□□□ -0.63
TSPAN4-214ENST00000525201 C7orf33Q8WU49 177 aa11.1□□□□□ -0.63
TSPAN4-214ENST00000525201 DMBT1Q9UGM3 2413 aaPredicted RBP11.1□□□□□ -0.63
TSPAN4-214ENST00000525201 A0A087WYN8 130 aa11.09□□□□□ -0.63
TSPAN4-214ENST00000525201 TRAV13-1A0A0B4J241 112 aa11.09□□□□□ -0.63
TSPAN4-214ENST00000525201 NPYP01303 97 aa11.09□□□□□ -0.63
TSPAN4-214ENST00000525201 TMEM136Q6ZRR5 245 aa11.09□□□□□ -0.63
TSPAN4-214ENST00000525201 PRELID3AQ96N28 172 aa11.09□□□□□ -0.63
TSPAN4-214ENST00000525201 YPEL4Q96NS1 127 aa11.09□□□□□ -0.63
TSPAN4-214ENST00000525201 PANO1I0J062 215 aa11.08□□□□□ -0.64
TSPAN4-214ENST00000525201 OXTP01178 125 aa11.08□□□□□ -0.64
TSPAN4-214ENST00000525201 KRTAP10-4P60372 401 aaPredicted RBP11.08□□□□□ -0.64
TSPAN4-214ENST00000525201 Q6ZUT4 128 aa11.08□□□□□ -0.64
TSPAN4-214ENST00000525201 SMCO4Q9NRQ5 59 aa11.08□□□□□ -0.64
TSPAN4-214ENST00000525201 PLAC8Q9NZF1 115 aa11.08□□□□□ -0.64
TSPAN4-214ENST00000525201 CHTF8P0CG12 524 aa11.07□□□□□ -0.64
TSPAN4-214ENST00000525201 IFI27P40305 119 aaPredicted RBP11.07□□□□□ -0.64
TSPAN4-214ENST00000525201 MRPS36P82909 103 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms