RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 TMEM14CQ9P0S9 112 aa4.51□□□□□ -1.69
SDC2-208ENST00000523877 R4GMQ9 66 aa4.51□□□□□ -1.69
SDC2-208ENST00000523877 FAM186AA6NE01 2351 aa4.51□□□□□ -1.69
SDC2-208ENST00000523877 FER1L5A0AVI2 2057 aa4.5□□□□□ -1.69
SDC2-208ENST00000523877 VPS13AQ96RL7 3174 aa4.5□□□□□ -1.69
SDC2-208ENST00000523877 IGLV5-52A0A0A0MRZ9 124 aa4.5□□□□□ -1.69
SDC2-208ENST00000523877 DNAJC9-AS1A6NH13 148 aa4.5□□□□□ -1.69
SDC2-208ENST00000523877 INAFM1C9JVW0 142 aa4.5□□□□□ -1.69
SDC2-208ENST00000523877 I3L3M4 83 aa4.5□□□□□ -1.69
SDC2-208ENST00000523877 M0R1W7 72 aa4.5□□□□□ -1.69
SDC2-208ENST00000523877 IGHV3-13P01766 116 aa4.5□□□□□ -1.69
SDC2-208ENST00000523877 CMC4P56277 68 aaPredicted RBP4.5□□□□□ -1.69
SDC2-208ENST00000523877 EGFEM1PQ0D2K5 195 aa4.5□□□□□ -1.69
SDC2-208ENST00000523877 PRR4Q16378 134 aa4.5□□□□□ -1.69
SDC2-208ENST00000523877 LY6G5CQ5SRR4 150 aa4.5□□□□□ -1.69
SDC2-208ENST00000523877 CASC10Q5T4H9 136 aa4.5□□□□□ -1.69
SDC2-208ENST00000523877 LINC01590Q5TEZ4 76 aa4.5□□□□□ -1.69
SDC2-208ENST00000523877 ENHOQ6UWT2 76 aa4.5□□□□□ -1.69
SDC2-208ENST00000523877 ZNF833PQ6ZTB9 187 aa4.5□□□□□ -1.69
SDC2-208ENST00000523877 S4R3C0 116 aa4.5□□□□□ -1.69
SDC2-208ENST00000523877 COL4A4P53420 1690 aaPredicted RBP4.5□□□□□ -1.69
SDC2-208ENST00000523877 FLNBO75369 2602 aaKnown RBP4.5□□□□□ -1.69
SDC2-208ENST00000523877 TET1Q8NFU7 2136 aa4.49□□□□□ -1.69
SDC2-208ENST00000523877 SPEGQ15772 3267 aa4.49□□□□□ -1.69
SDC2-208ENST00000523877 MAP1BP46821 2468 aaKnown RBP4.49□□□□□ -1.69
SDC2-208ENST00000523877 MPDZO75970 2070 aa4.49□□□□□ -1.69
SDC2-208ENST00000523877 PTPRZ1P23471 2315 aaPredicted RBP4.49□□□□□ -1.69
SDC2-208ENST00000523877 TECTAO75443 2155 aa4.49□□□□□ -1.69
SDC2-208ENST00000523877 TRBV6-1A0A0K0K1D8 114 aa4.49□□□□□ -1.69
SDC2-208ENST00000523877 NTN3O00634 580 aaPredicted RBP4.49□□□□□ -1.69
SDC2-208ENST00000523877 LUZP6Q538Z0 58 aa4.49□□□□□ -1.69
SDC2-208ENST00000523877 ZNF575Q86XF7 245 aa4.49□□□□□ -1.69
SDC2-208ENST00000523877 PRAC1Q96KF2 57 aa4.49□□□□□ -1.69
SDC2-208ENST00000523877 TRIOO75962 3097 aa4.49□□□□□ -1.69
SDC2-208ENST00000523877 ABCA7Q8IZY2 2146 aa4.48□□□□□ -1.69
SDC2-208ENST00000523877 RIF1Q5UIP0 2472 aaKnown RBP4.48□□□□□ -1.69
SDC2-208ENST00000523877 IGLV5-37A0A075B6J1 123 aa4.48□□□□□ -1.69
SDC2-208ENST00000523877 TRAV12-3A0A0B4J271 114 aa4.48□□□□□ -1.69
SDC2-208ENST00000523877 A0A0J9YXY3 114 aa4.48□□□□□ -1.69
SDC2-208ENST00000523877 IGIPA6NJ69 53 aa4.48□□□□□ -1.69
SDC2-208ENST00000523877 PMS2P5A8MQ11 134 aa4.48□□□□□ -1.69
SDC2-208ENST00000523877 C10orf142B7Z368 130 aa4.48□□□□□ -1.69
SDC2-208ENST00000523877 NDUFB1O75438 58 aa4.48□□□□□ -1.69
SDC2-208ENST00000523877 CGB3P0DN86 165 aa4.48□□□□□ -1.69
SDC2-208ENST00000523877 CGB7P0DN87 165 aa4.48□□□□□ -1.69
SDC2-208ENST00000523877 C8orf17Q9NRJ1 99 aa4.48□□□□□ -1.69
SDC2-208ENST00000523877 NDUFA4L2Q9NRX3 87 aa4.48□□□□□ -1.69
SDC2-208ENST00000523877 DEC1Q9P2X7 70 aa4.48□□□□□ -1.69
SDC2-208ENST00000523877 PRRC2BQ5JSZ5 2229 aaKnown RBP4.48□□□□□ -1.69
SDC2-208ENST00000523877 RPL37AP8A6NKH3 93 aa4.47□□□□□ -1.69
SDC2-208ENST00000523877 A8MU10 97 aa4.47□□□□□ -1.69
SDC2-208ENST00000523877 JMJD7-PLA2G4BH0Y9G9 81 aa4.47□□□□□ -1.69
SDC2-208ENST00000523877 PLXNB1O43157 2135 aa4.47□□□□□ -1.69
SDC2-208ENST00000523877 TFF1P04155 84 aa4.47□□□□□ -1.69
SDC2-208ENST00000523877 CD24P25063 80 aa4.47□□□□□ -1.69
SDC2-208ENST00000523877 LYPD2Q6UXB3 125 aa4.47□□□□□ -1.69
SDC2-208ENST00000523877 SMIM14Q96QK8 99 aa4.47□□□□□ -1.69
SDC2-208ENST00000523877 Q9BRP9 147 aa4.47□□□□□ -1.69
SDC2-208ENST00000523877 OCR1Q9BZK8 76 aa4.47□□□□□ -1.69
SDC2-208ENST00000523877 C14orf132Q9NPU4 83 aa4.47□□□□□ -1.69
SDC2-208ENST00000523877 SPTBP11277 2137 aa4.46□□□□□ -1.69
SDC2-208ENST00000523877 WDR87Q6ZQQ6 2873 aa4.46□□□□□ -1.7
SDC2-208ENST00000523877 GCN1Q92616 2671 aaKnown RBP4.46□□□□□ -1.7
SDC2-208ENST00000523877 IGHV4-4A0A075B6R2 117 aa4.46□□□□□ -1.7
SDC2-208ENST00000523877 IGHV7-4-1A0A0J9YVY3 117 aa4.46□□□□□ -1.7
SDC2-208ENST00000523877 TRBV6-5A0A0K0K1A5 114 aa4.46□□□□□ -1.7
SDC2-208ENST00000523877 KRTAP4-16G5E9R7 235 aaPredicted RBP4.46□□□□□ -1.7
SDC2-208ENST00000523877 FSHBP01225 129 aa4.46□□□□□ -1.7
SDC2-208ENST00000523877 Q6ZS52 159 aa4.46□□□□□ -1.7
SDC2-208ENST00000523877 Q8N9P0 234 aaPredicted RBP4.46□□□□□ -1.7
SDC2-208ENST00000523877 Q8NDZ9 215 aa4.46□□□□□ -1.7
SDC2-208ENST00000523877 C1orf147Q96MC9 270 aaPredicted RBP4.46□□□□□ -1.7
SDC2-208ENST00000523877 C22orf24Q9Y442 160 aa4.46□□□□□ -1.7
SDC2-208ENST00000523877 COL4A3Q01955 1670 aa4.45□□□□□ -1.7
SDC2-208ENST00000523877 IGLV1-50A0A075B6I6 118 aa4.45□□□□□ -1.7
SDC2-208ENST00000523877 IGHV3-49A0A0A0MS15 119 aa4.45□□□□□ -1.7
SDC2-208ENST00000523877 LHBP01229 141 aa4.45□□□□□ -1.7
SDC2-208ENST00000523877 IGLV2-14P01704 120 aa4.45□□□□□ -1.7
SDC2-208ENST00000523877 RNASE13Q5GAN3 156 aaKnown RBP4.45□□□□□ -1.7
SDC2-208ENST00000523877 KRTAP5-3Q6L8H2 238 aa4.45□□□□□ -1.7
SDC2-208ENST00000523877 NPBQ8NG41 125 aa4.45□□□□□ -1.7
SDC2-208ENST00000523877 ORMDL1Q9P0S3 153 aa4.45□□□□□ -1.7
SDC2-208ENST00000523877 BPTFQ12830 3046 aa4.44□□□□□ -1.7
SDC2-208ENST00000523877 LECT2O14960 151 aa4.44□□□□□ -1.7
SDC2-208ENST00000523877 IGLV2-23P01705 113 aa4.44□□□□□ -1.7
SDC2-208ENST00000523877 PATE4P0C8F1 98 aa4.44□□□□□ -1.7
SDC2-208ENST00000523877 MYO7BQ6PIF6 2116 aa4.44□□□□□ -1.7
SDC2-208ENST00000523877 IGHV3-73A0A0B4J1V6 119 aa4.43□□□□□ -1.7
SDC2-208ENST00000523877 TRAV21A0A0B4J279 112 aa4.43□□□□□ -1.7
SDC2-208ENST00000523877 CXorf51AA0A1B0GTR3 108 aa4.43□□□□□ -1.7
SDC2-208ENST00000523877 A8MWP4 228 aa4.43□□□□□ -1.7
SDC2-208ENST00000523877 ZFP36P26651 326 aaKnown RBP4.43□□□□□ -1.7
SDC2-208ENST00000523877 C9orf66Q5T8R8 295 aa4.43□□□□□ -1.7
SDC2-208ENST00000523877 ADM2Q7Z4H4 148 aa4.43□□□□□ -1.7
SDC2-208ENST00000523877 FDCSPQ8NFU4 85 aa4.43□□□□□ -1.7
SDC2-208ENST00000523877 CHCHD7Q9BUK0 85 aa4.43□□□□□ -1.7
SDC2-208ENST00000523877 LENEPQ9Y5L5 61 aa4.43□□□□□ -1.7
SDC2-208ENST00000523877 ZZEF1O43149 2961 aa4.43□□□□□ -1.7
SDC2-208ENST00000523877 MED13Q9UHV7 2174 aa4.43□□□□□ -1.7
SDC2-208ENST00000523877 IGHV4-30-2A0A087WSY4 118 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms