RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 LINC01600Q96MT4 127 aa13.05□□□□□ -0.32
PABPC1-218ENST00000521865 TSHBP01222 138 aa13.04□□□□□ -0.32
PABPC1-218ENST00000521865 TNXBP22105 4242 aa13.04□□□□□ -0.32
PABPC1-218ENST00000521865 GAS8-AS1O95177 125 aa13.03□□□□□ -0.32
PABPC1-218ENST00000521865 ESDP10768 282 aa13.03□□□□□ -0.32
PABPC1-218ENST00000521865 SYCNQ0VAF6 134 aa13.02□□□□□ -0.33
PABPC1-218ENST00000521865 CT83Q5H943 113 aa13.02□□□□□ -0.33
PABPC1-218ENST00000521865 BLOC1S1P78537 153 aa13.01□□□□□ -0.33
PABPC1-218ENST00000521865 CD164L2Q6UWJ8 174 aa13.01□□□□□ -0.33
PABPC1-218ENST00000521865 SPINK6Q6UWN8 80 aa13.01□□□□□ -0.33
PABPC1-218ENST00000521865 ZNF664Q8N3J9 261 aa13.01□□□□□ -0.33
PABPC1-218ENST00000521865 CDC42SE2Q9NRR3 84 aa13.01□□□□□ -0.33
PABPC1-218ENST00000521865 A0A1B0GUT8 65 aa13□□□□□ -0.33
PABPC1-218ENST00000521865 C7orf77A4D0Y5 90 aa13□□□□□ -0.33
PABPC1-218ENST00000521865 MALP21145 153 aa13□□□□□ -0.33
PABPC1-218ENST00000521865 REG3GQ6UW15 175 aa13□□□□□ -0.33
PABPC1-218ENST00000521865 ALKAL2Q6UX46 152 aa13□□□□□ -0.33
PABPC1-218ENST00000521865 FAM210AQ96ND0 272 aa13□□□□□ -0.33
PABPC1-218ENST00000521865 TMEM191AQ9H0A3 160 aa13□□□□□ -0.33
PABPC1-218ENST00000521865 HIGD1CA8MV81 97 aa12.99□□□□□ -0.33
PABPC1-218ENST00000521865 Q6ZRP5 223 aa12.99□□□□□ -0.33
PABPC1-218ENST00000521865 MRPL52Q86TS9 123 aaKnown RBP12.99□□□□□ -0.33
PABPC1-218ENST00000521865 A0A0J9YXV3 536 aa12.98□□□□□ -0.33
PABPC1-218ENST00000521865 FCER1GP30273 86 aa12.98□□□□□ -0.33
PABPC1-218ENST00000521865 CAMPP49913 170 aa12.98□□□□□ -0.33
PABPC1-218ENST00000521865 POLR2KP53803 58 aaKnown RBP12.98□□□□□ -0.33
PABPC1-218ENST00000521865 GAGE2BQ13066 116 aa12.98□□□□□ -0.33
PABPC1-218ENST00000521865 ODF1Q14990 250 aa12.98□□□□□ -0.33
PABPC1-218ENST00000521865 TSKUQ8WUA8 353 aa12.98□□□□□ -0.33
PABPC1-218ENST00000521865 ISOC2Q96AB3 205 aa12.98□□□□□ -0.33
PABPC1-218ENST00000521865 SMIM7Q9BQ49 75 aa12.98□□□□□ -0.33
PABPC1-218ENST00000521865 TRBV27A0A0K0K1C4 114 aa12.97□□□□□ -0.33
PABPC1-218ENST00000521865 RAB4AP20338 218 aa12.97□□□□□ -0.33
PABPC1-218ENST00000521865 AMN1Q8IY45 258 aa12.97□□□□□ -0.33
PABPC1-218ENST00000521865 EIF5A2Q9GZV4 153 aaKnown RBP12.97□□□□□ -0.33
PABPC1-218ENST00000521865 IGLV4-69A0A075B6H9 119 aa12.95□□□□□ -0.34
PABPC1-218ENST00000521865 LOC107984640A0A0U1RRK4 108 aa12.95□□□□□ -0.34
PABPC1-218ENST00000521865 C1orf196B1AJZ1 125 aa12.95□□□□□ -0.34
PABPC1-218ENST00000521865 SMKR1H3BMG3 65 aa12.95□□□□□ -0.34
PABPC1-218ENST00000521865 COX7A2LO14548 114 aa12.95□□□□□ -0.34
PABPC1-218ENST00000521865 VCYO14598 125 aa12.95□□□□□ -0.34
PABPC1-218ENST00000521865 PTTG1IPP53801 180 aa12.95□□□□□ -0.34
PABPC1-218ENST00000521865 LINC01551Q86U37 167 aa12.95□□□□□ -0.34
PABPC1-218ENST00000521865 SMAGPQ0VAQ4 97 aa12.94□□□□□ -0.34
PABPC1-218ENST00000521865 CAMK2N2Q96S95 79 aa12.94□□□□□ -0.34
PABPC1-218ENST00000521865 LRP2P98164 4655 aa12.94□□□□□ -0.34
PABPC1-218ENST00000521865 ZNF727A8MUV8 499 aa12.93□□□□□ -0.34
PABPC1-218ENST00000521865 RNASE13Q5GAN3 156 aaKnown RBP12.93□□□□□ -0.34
PABPC1-218ENST00000521865 TRAV13-1A0A0B4J241 112 aa12.92□□□□□ -0.34
PABPC1-218ENST00000521865 RIGQ13278 110 aa12.92□□□□□ -0.34
PABPC1-218ENST00000521865 KIR2DL4Q99706 377 aa12.92□□□□□ -0.34
PABPC1-218ENST00000521865 OSTCQ9NRP0 149 aa12.92□□□□□ -0.34
PABPC1-218ENST00000521865 PPP1R17O96001 155 aa12.91□□□□□ -0.34
PABPC1-218ENST00000521865 KRTAP10-8P60410 259 aa12.91□□□□□ -0.34
PABPC1-218ENST00000521865 SRSF9Q13242 221 aaKnown RBP eCLIP12.91□□□□□ -0.34
PABPC1-218ENST00000521865 AKAP14Q86UN6 197 aa12.91□□□□□ -0.34
PABPC1-218ENST00000521865 SUMO2P61956 95 aaKnown RBP12.9□□□□□ -0.34
PABPC1-218ENST00000521865 C5orf38Q86SI9 138 aa12.9□□□□□ -0.34
PABPC1-218ENST00000521865 UBE2D4Q9Y2X8 147 aa12.9□□□□□ -0.34
PABPC1-218ENST00000521865 APOMO95445 188 aa12.89□□□□□ -0.35
PABPC1-218ENST00000521865 RPL18AQ02543 176 aaKnown RBP12.89□□□□□ -0.35
PABPC1-218ENST00000521865 NUP35Q8NFH5 326 aa12.89□□□□□ -0.35
PABPC1-218ENST00000521865 CSDC2Q9Y534 153 aaKnown RBP12.89□□□□□ -0.35
PABPC1-218ENST00000521865 RNF213Q63HN8 5207 aa12.88□□□□□ -0.35
PABPC1-218ENST00000521865 A0A1W2PNN7 141 aa12.88□□□□□ -0.35
PABPC1-218ENST00000521865 TMEM18Q96B42 140 aa12.88□□□□□ -0.35
PABPC1-218ENST00000521865 PPP1R2P9O14990 202 aa12.87□□□□□ -0.35
PABPC1-218ENST00000521865 MT-ND6P03923 174 aa12.87□□□□□ -0.35
PABPC1-218ENST00000521865 Q6ZUT4 128 aa12.87□□□□□ -0.35
PABPC1-218ENST00000521865 NRACQ8N912 160 aa12.87□□□□□ -0.35
PABPC1-218ENST00000521865 V9GYV3 84 aa12.87□□□□□ -0.35
PABPC1-218ENST00000521865 SPAG11BQ08648 103 aa12.86□□□□□ -0.35
PABPC1-218ENST00000521865 C9orf116Q5BN46 136 aaPredicted RBP12.86□□□□□ -0.35
PABPC1-218ENST00000521865 C2orf48Q96LS8 159 aa12.86□□□□□ -0.35
PABPC1-218ENST00000521865 NAT8BQ9UHF3 227 aa12.86□□□□□ -0.35
PABPC1-218ENST00000521865 hCG_2014768A0A024R1R8 64 aa12.85□□□□□ -0.35
PABPC1-218ENST00000521865 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.85□□□□□ -0.35
PABPC1-218ENST00000521865 SRP19P09132 144 aaKnown RBP12.85□□□□□ -0.35
PABPC1-218ENST00000521865 MRPL51Q4U2R6 128 aaKnown RBP12.84□□□□□ -0.35
PABPC1-218ENST00000521865 OPRPNQ99935 248 aaPredicted RBP12.84□□□□□ -0.35
PABPC1-218ENST00000521865 PSORS1C2Q9UIG4 136 aa12.84□□□□□ -0.35
PABPC1-218ENST00000521865 TMEM241Q24JQ0 296 aa12.83□□□□□ -0.36
PABPC1-218ENST00000521865 C1orf137Q5JT78 98 aa12.82□□□□□ -0.36
PABPC1-218ENST00000521865 FAM104BQ5XKR9 115 aa12.82□□□□□ -0.36
PABPC1-218ENST00000521865 PHF5AQ7RTV0 110 aaKnown RBP12.82□□□□□ -0.36
PABPC1-218ENST00000521865 TIMM21Q9BVV7 248 aa12.82□□□□□ -0.36
PABPC1-218ENST00000521865 CKS2P33552 79 aa12.81□□□□□ -0.36
PABPC1-218ENST00000521865 ADIRFQ15847 76 aa12.81□□□□□ -0.36
PABPC1-218ENST00000521865 OR10D4PQ8NGN7 298 aa12.81□□□□□ -0.36
PABPC1-218ENST00000521865 ORAOV1Q8WV07 137 aa12.8□□□□□ -0.36
PABPC1-218ENST00000521865 C20orf78Q9BR46 151 aa12.8□□□□□ -0.36
PABPC1-218ENST00000521865 LINC00862A6NCI5 91 aa12.79□□□□□ -0.36
PABPC1-218ENST00000521865 TCAPO15273 167 aa12.79□□□□□ -0.36
PABPC1-218ENST00000521865 RPL23P62829 140 aaKnown RBP12.79□□□□□ -0.36
PABPC1-218ENST00000521865 RPL39P62891 51 aaKnown RBP12.79□□□□□ -0.36
PABPC1-218ENST00000521865 RNF151Q2KHN1 245 aa12.79□□□□□ -0.36
PABPC1-218ENST00000521865 FAM74A3Q4VXF1 159 aa12.79□□□□□ -0.36
PABPC1-218ENST00000521865 IMMP2LQ96T52 175 aa12.77□□□□□ -0.37
PABPC1-218ENST00000521865 TRBV24-1A0A075B6N3 115 aa12.76□□□□□ -0.37
PABPC1-218ENST00000521865 A0A1B0GW15 77 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms