RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 K7EN84 100 aa6.77□□□□□ -1.33
CSMD1-210ENST00000521646 PFDN1O60925 122 aa6.77□□□□□ -1.33
CSMD1-210ENST00000521646 CACNG7P62955 275 aa6.77□□□□□ -1.33
CSMD1-210ENST00000521646 COTL1Q14019 142 aa6.77□□□□□ -1.33
CSMD1-210ENST00000521646 SPINK6Q6UWN8 80 aa6.77□□□□□ -1.33
CSMD1-210ENST00000521646 KRTAP11-1Q8IUC1 163 aa6.77□□□□□ -1.33
CSMD1-210ENST00000521646 C9orf62Q8N4C0 152 aa6.77□□□□□ -1.33
CSMD1-210ENST00000521646 CNFNQ9BYD5 112 aa6.77□□□□□ -1.33
CSMD1-210ENST00000521646 FGF6P10767 208 aa6.76□□□□□ -1.33
CSMD1-210ENST00000521646 XCL1P47992 114 aa6.76□□□□□ -1.33
CSMD1-210ENST00000521646 ZNF345Q14585 488 aa6.76□□□□□ -1.33
CSMD1-210ENST00000521646 FAT4Q6V0I7 4981 aa6.75□□□□□ -1.33
CSMD1-210ENST00000521646 UMAD1C9J7I0 102 aa6.75□□□□□ -1.33
CSMD1-210ENST00000521646 UBE2L6O14933 153 aa6.75□□□□□ -1.33
CSMD1-210ENST00000521646 CCL25O15444 150 aa6.75□□□□□ -1.33
CSMD1-210ENST00000521646 BCL2L11O43521 198 aa6.75□□□□□ -1.33
CSMD1-210ENST00000521646 RNASE7Q9H1E1 156 aaKnown RBP6.75□□□□□ -1.33
CSMD1-210ENST00000521646 LINC00959A0A1B0GUT2 108 aa6.74□□□□□ -1.33
CSMD1-210ENST00000521646 HMSDA8MTL9 139 aa6.74□□□□□ -1.33
CSMD1-210ENST00000521646 TSHBP01222 138 aa6.74□□□□□ -1.33
CSMD1-210ENST00000521646 IFNA1P01562 189 aa6.74□□□□□ -1.33
CSMD1-210ENST00000521646 RPS20P60866 119 aaKnown RBP6.74□□□□□ -1.33
CSMD1-210ENST00000521646 RNASEKQ6P5S7 137 aaKnown RBP6.74□□□□□ -1.33
CSMD1-210ENST00000521646 TRAV1-1A0A0B4J248 108 aa6.73□□□□□ -1.33
CSMD1-210ENST00000521646 F2Z2F3 143 aa6.73□□□□□ -1.33
CSMD1-210ENST00000521646 TRGC1P0CF51 173 aa6.73□□□□□ -1.33
CSMD1-210ENST00000521646 BCL2P10415 239 aa6.73□□□□□ -1.33
CSMD1-210ENST00000521646 ESDP10768 282 aa6.73□□□□□ -1.33
CSMD1-210ENST00000521646 GNG4P50150 75 aa6.73□□□□□ -1.33
CSMD1-210ENST00000521646 CFAP161Q6P656 301 aa6.73□□□□□ -1.33
CSMD1-210ENST00000521646 OR5A1Q8NGJ0 315 aa6.73□□□□□ -1.33
CSMD1-210ENST00000521646 CARD19Q96LW7 228 aa6.73□□□□□ -1.33
CSMD1-210ENST00000521646 SDHAF1A6NFY7 115 aa6.72□□□□□ -1.33
CSMD1-210ENST00000521646 TWIST1Q15672 202 aa6.72□□□□□ -1.33
CSMD1-210ENST00000521646 Q6ZRP5 223 aa6.72□□□□□ -1.33
CSMD1-210ENST00000521646 MANBALQ9NQG1 85 aa6.72□□□□□ -1.33
CSMD1-210ENST00000521646 PSORS1C2Q9UIG4 136 aa6.72□□□□□ -1.33
CSMD1-210ENST00000521646 MEF2BQ02080 365 aaPredicted RBP6.71□□□□□ -1.34
CSMD1-210ENST00000521646 AMMECR1LQ6DCA0 310 aa6.71□□□□□ -1.34
CSMD1-210ENST00000521646 REG3GQ6UW15 175 aa6.71□□□□□ -1.34
CSMD1-210ENST00000521646 PHF5AQ7RTV0 110 aaKnown RBP6.71□□□□□ -1.34
CSMD1-210ENST00000521646 KRTAP7-1Q8IUC3 87 aa6.71□□□□□ -1.34
CSMD1-210ENST00000521646 TCTE3Q8IZS6 198 aa6.71□□□□□ -1.34
CSMD1-210ENST00000521646 PRR26Q8N8Z3 221 aa6.71□□□□□ -1.34
CSMD1-210ENST00000521646 OCC1Q8TAD7 63 aa6.71□□□□□ -1.34
CSMD1-210ENST00000521646 TMEM242Q9NWH2 141 aa6.71□□□□□ -1.34
CSMD1-210ENST00000521646 IGLV4-69A0A075B6H9 119 aa6.7□□□□□ -1.34
CSMD1-210ENST00000521646 IGHV1-58A0A0C4DH39 117 aa6.7□□□□□ -1.34
CSMD1-210ENST00000521646 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.7□□□□□ -1.34
CSMD1-210ENST00000521646 APCSP02743 223 aa6.7□□□□□ -1.34
CSMD1-210ENST00000521646 SYCNQ0VAF6 134 aa6.7□□□□□ -1.34
CSMD1-210ENST00000521646 GAGE2BQ13066 116 aa6.7□□□□□ -1.34
CSMD1-210ENST00000521646 RNASE13Q5GAN3 156 aaKnown RBP6.7□□□□□ -1.34
CSMD1-210ENST00000521646 NUP35Q8NFH5 326 aa6.7□□□□□ -1.34
CSMD1-210ENST00000521646 FAM104AQ969W3 186 aa6.7□□□□□ -1.34
CSMD1-210ENST00000521646 RPP21Q9H633 154 aaKnown RBP6.7□□□□□ -1.34
CSMD1-210ENST00000521646 CDC42SE2Q9NRR3 84 aa6.7□□□□□ -1.34
CSMD1-210ENST00000521646 MED9Q9NWA0 146 aa6.7□□□□□ -1.34
CSMD1-210ENST00000521646 NCR2O95944 276 aa6.69□□□□□ -1.34
CSMD1-210ENST00000521646 C9orf116Q5BN46 136 aaPredicted RBP6.69□□□□□ -1.34
CSMD1-210ENST00000521646 SMIM12Q96EX1 92 aa6.69□□□□□ -1.34
CSMD1-210ENST00000521646 TRBV6-5A0A0K0K1A5 114 aa6.68□□□□□ -1.34
CSMD1-210ENST00000521646 KANTRA0A1W2PQU2 76 aa6.68□□□□□ -1.34
CSMD1-210ENST00000521646 FAM168BA1KXE4 195 aa6.68□□□□□ -1.34
CSMD1-210ENST00000521646 H7C423 109 aa6.68□□□□□ -1.34
CSMD1-210ENST00000521646 KRTAP1-4P0C5Y4 121 aa6.68□□□□□ -1.34
CSMD1-210ENST00000521646 CAMPP49913 170 aa6.68□□□□□ -1.34
CSMD1-210ENST00000521646 POLR2KP53803 58 aaKnown RBP6.68□□□□□ -1.34
CSMD1-210ENST00000521646 CD164L2Q6UWJ8 174 aa6.68□□□□□ -1.34
CSMD1-210ENST00000521646 OPRPNQ99935 248 aaPredicted RBP6.68□□□□□ -1.34
CSMD1-210ENST00000521646 SMKR1H3BMG3 65 aa6.67□□□□□ -1.34
CSMD1-210ENST00000521646 I3L3M4 83 aa6.67□□□□□ -1.34
CSMD1-210ENST00000521646 ZNF25P17030 456 aaPredicted RBP6.67□□□□□ -1.34
CSMD1-210ENST00000521646 EIF5AP63241 154 aaKnown RBP6.67□□□□□ -1.34
CSMD1-210ENST00000521646 MRPL52Q86TS9 123 aaKnown RBP6.67□□□□□ -1.34
CSMD1-210ENST00000521646 LINC00474Q9P2X8 69 aa6.67□□□□□ -1.34
CSMD1-210ENST00000521646 XKRY2A2RUG3 117 aa6.66□□□□□ -1.34
CSMD1-210ENST00000521646 PDE6DO43924 150 aa6.66□□□□□ -1.34
CSMD1-210ENST00000521646 C10orf25Q5T742 122 aa6.66□□□□□ -1.34
CSMD1-210ENST00000521646 ZNF664Q8N3J9 261 aa6.66□□□□□ -1.34
CSMD1-210ENST00000521646 LOC107984640A0A0U1RRK4 108 aa6.65□□□□□ -1.34
CSMD1-210ENST00000521646 PMCHP20382 165 aa6.65□□□□□ -1.34
CSMD1-210ENST00000521646 C1orf137Q5JT78 98 aa6.65□□□□□ -1.34
CSMD1-210ENST00000521646 AKAP14Q86UN6 197 aa6.65□□□□□ -1.34
CSMD1-210ENST00000521646 TRBV27A0A0K0K1C4 114 aa6.64□□□□□ -1.35
CSMD1-210ENST00000521646 APOMO95445 188 aa6.64□□□□□ -1.35
CSMD1-210ENST00000521646 RAB4AP20338 218 aa6.64□□□□□ -1.35
CSMD1-210ENST00000521646 Q6ZUT4 128 aa6.64□□□□□ -1.35
CSMD1-210ENST00000521646 C5orf38Q86SI9 138 aa6.64□□□□□ -1.35
CSMD1-210ENST00000521646 AMN1Q8IY45 258 aa6.64□□□□□ -1.35
CSMD1-210ENST00000521646 UBE2D4Q9Y2X8 147 aa6.64□□□□□ -1.35
CSMD1-210ENST00000521646 MT-ND6P03923 174 aa6.63□□□□□ -1.35
CSMD1-210ENST00000521646 IGLV7-43P04211 117 aa6.63□□□□□ -1.35
CSMD1-210ENST00000521646 SS18Q15532 418 aa6.63□□□□□ -1.35
CSMD1-210ENST00000521646 NRACQ8N912 160 aa6.63□□□□□ -1.35
CSMD1-210ENST00000521646 MRAP2Q96G30 205 aa6.63□□□□□ -1.35
CSMD1-210ENST00000521646 TRAV13-1A0A0B4J241 112 aa6.62□□□□□ -1.35
CSMD1-210ENST00000521646 RPL18AQ02543 176 aaKnown RBP6.62□□□□□ -1.35
CSMD1-210ENST00000521646 TMEM101Q96IK0 257 aa6.62□□□□□ -1.35
CSMD1-210ENST00000521646 FAM210AQ96ND0 272 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms